KEGG   Oncorhynchus mykiss (rainbow trout): 110523750
Entry
110523750         CDS       T07259                                 
Symbol
zmat5
Name
(RefSeq) zinc finger matrin-type protein 5
  KO
K13152  U11/U12 small nuclear ribonucleoprotein 20 kDa protein
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omy03041]
    110523750 (zmat5)
Spliceosome [BR:omy03041]
 Other splicing related proteins
  Minor spliceosome components
   Minor spliceosome specific factors
    110523750 (zmat5)
SSDB
Motif
Pfam: zf-CCCH_4 zf-CCCH zf_CCCH_4 zf-U1 zf-CCCH_9 CCDC34 zf-CCCH_2 zf-C2H2_jaz
Other DBs
NCBI-GeneID: 110523750
NCBI-ProteinID: XP_021458392
Ensembl: ENSOMYG00000031675
UniProt: A0A8C7W4E4
LinkDB
Position
5:complement(37558291..37563161)
AA seq 176 aa
MGKRYYCDYCDRSFQDNMHNRKKHLYGVQHHRSKKAWFDNFRDAAAILYDEQTKKPCRKF
LQTGQCVFGNNCRFSHMSERDMENLRMQIEDERRSREDPEHRASPERSIEEWLTRREKKR
AALSSGSVLKEEDEEDEDNQPENDIPPHFLTILDLPPSLLPPPPGGWKVKVRTEWG
NT seq 531 nt   +upstreamnt  +downstreamnt
atggggaagcggtattactgtgactactgtgaccggtcctttcaggacaacatgcacaac
aggaaaaaacacctgtatggtgttcaacaccacagatctaaaaaggcctggtttgacaat
ttcagggatgcagcagccatcctgtatgatgaacaaactaagaaaccctgcaggaaattt
cttcagacgggccagtgtgtgtttggcaacaactgtaggttctctcacatgtcagagagg
gacatggagaacctaagaatgcagattgaagatgaaagacggagcagagaggacccggag
cacagagcgtcccctgagcggagcatagaggagtggctcaccagaagagagaagaagaga
gccgccctaagcagtggaagtgttctgaaagaggaagatgaggaggatgaagataatcaa
ccagagaatgacataccgccacatttcctcaccattcttgaccttcctccctcccttctg
ccccctccccctggaggatggaaagtcaaagtcagaactgaatggggttga

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