Oncorhynchus mykiss (rainbow trout): 110523758
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Entry
110523758 CDS
T07259
Symbol
srsf9
Name
(RefSeq) serine/arginine-rich splicing factor 9
KO
K21123
serine/arginine-rich splicing factor 9
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110523758 (srsf9)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110523758 (srsf9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110523758 (srsf9)
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
SR proteins
110523758 (srsf9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
DUF2457
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
110523758
NCBI-ProteinID:
XP_021458415
Ensembl:
ENSOMYG00000032957
UniProt:
A0A060Y7E7
LinkDB
All DBs
Position
5:37917781..37921282
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AA seq
248 aa
AA seq
DB search
MTDGRIYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRGTIPFAFVRFEDPRDAEDAVY
GRNGYGFGDSKLRVEYPRSSGAKFSGPMGGEGGGPKGRFGPPTRRSEFRVIVTGLPPSGS
WQDLKDHMREAGDVCFADVQRDGEGVVEFVRREDMEYALRRLDRTEFRSHQGEMANIRVH
GEHGASYGRSQSRSRSPRGRGYSPPPYKSRGSPPQRYQSPPRRHVSRHSPPARRHPVTHH
SPPPRHYR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggaaggatctacgtgggaaatcttccaatggacgtccaggagagggacata
gaggatctcttcttcaaatatggaaaaattcgggatatcgaactaaagaataacagggga
accatcccttttgcttttgttcgcttcgaagatccacgggatgcagaagatgctgtctat
ggaaggaatggatatggattcggtgactccaagcttcgtgtagaataccctcgctcctct
ggcgccaaatttagtggccctatgggaggcgaaggagggggtcctaaggggaggtttggg
cctccaactcggagatctgagttccgggtgatagtgactggcttgcccccatcagggagc
tggcaggatcttaaagaccacatgcgtgaggcaggggatgtgtgtttcgccgacgtgcag
cgggatggtgaaggggtggtggagtttgtccgtcgggaggacatggagtatgccctgcgc
agactggacaggactgagttccgttcccatcagggggagatggcaaacattcgtgtccat
ggagaacatggtgccagttatggtcgctcgcagtcccgttccagatccccccgggggcgt
ggctactcaccacctccttacaaaagcagagggtcccctccacagcgctaccagtcacct
ccacggcgccatgtgtcccgccatagccccccagcgaggcgacacccagtaacacaccac
agcccacccccacgccactatcggtag
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