Oncorhynchus mykiss (rainbow trout): 110523786
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Entry
110523786 CDS
T07259
Symbol
eri1
Name
(RefSeq) 3'-5' exoribonuclease 1
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110523786 (eri1)
03036 Chromosome and associated proteins [BR:
omy03036
]
110523786 (eri1)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110523786 (eri1)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
110523786 (eri1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
Motif
Other DBs
NCBI-GeneID:
110523786
NCBI-ProteinID:
XP_021458480
Ensembl:
ENSOMYG00000041352
LinkDB
All DBs
Position
5:39581792..39584528
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AA seq
341 aa
AA seq
DB search
MEEYKENIQDEGDNVKLSSKPEEDDKSCNKVCSNIGEPVPQVSSTRGEFSDPVYKEIALA
NGHINRMNKDELRSKLAECKLDTRGVKDVMKKRLKNYYKKQKLSLMQSVTEGGPTDAYYD
FICVVDFEATCEQDNPLDFTHEIIEFPMVLFNTHTLDIEDSFQEYVRPEVNTQLSEFCIK
LTGITQKMVDEADTFPDVLKRVVLWLQEKELGTKYKYAILTDGSWDMSKFMNTQCRLSRL
RYPQFAKKWINIKKFYGNFYKVPRTQTKLSSMLEKLGLQYEGRPHSGLDDSRNIARIALR
MLQDGCQLRINERMHEGQLRTVPSSAPVEGAPPPHNPRSRV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatacaaggagaatattcaagacgagggtgacaatgtgaaattgtcttctaaa
cccgaggaagatgacaagtcttgcaacaaggtgtgtagtaacattggcgaacctgtccct
caagtatcttctactcgtggcgagttcagtgatcctgtttacaaggagattgctcttgca
aatggacatattaaccgcatgaacaaggatgagcttcggtctaaactggcagagtgtaag
cttgacacaagaggtgtgaaggatgtgatgaagaagcggttgaagaactactacaagaag
cagaagctgtctttgatgcagtctgtgacagagggtggcccaactgatgcctactacgac
ttcatctgtgtggtggacttcgaggcaacgtgtgaacaggacaacccccttgacttcacg
catgaaatcattgagtttccaatggtcctgttcaacacccacactttagacattgaggac
agctttcaggaatatgtcaggccagaagtcaacacacagctgtcagagttctgcataaag
ttgacagggataacacagaaaatggtggatgaggcagacacgttccccgatgttcttaag
cgggtggtgctttggcttcaggagaaagagcttggcacaaaatacaaatatgccattctt
acagatggatcttgggacatgagcaagttcatgaacacccagtgccgtttaagtcggctc
agatatccacagtttgcaaagaagtggatcaacatcaaaaaattctacggaaacttctat
aaggtccctcgtacccagaccaagctgagcagcatgctagagaagctgggacttcaatac
gagggccgccctcactctggcctggatgactcgcgcaacattgctcgcattgcgctgcgc
atgctgcaggatggctgccaactgcgcatcaacgagcgcatgcacgaaggacagctgcgg
actgtgcccagctctgcccctgtggaaggagccccacccccacataatcctcgcagcaga
gtctag
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