Oncorhynchus mykiss (rainbow trout): 110523788
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Entry
110523788 CDS
T07259
Symbol
nkx6.1
Name
(RefSeq) homeobox protein Nkx-6.1 isoform X1
KO
K08030
homeobox protein Nkx-6.1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110523788 (nkx6.1)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
110523788 (nkx6.1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
PKK
ABC_trans_N
Motif
Other DBs
NCBI-GeneID:
110523788
NCBI-ProteinID:
XP_021458483
Ensembl:
ENSOMYG00000041392
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All DBs
Position
5:39631643..39635006
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AA seq
331 aa
AA seq
DB search
MLAVGQMDGSRQSAFLLSTPPLAALHSMAEMKTPLYPAYPLSSTGPASSTSPTATSPNPG
GIPVSSPGIKPSSGMSSLGSPHQCSALGTPHGINDILSRPSILSPGAAAAVAASSSAGIL
SGMPRFSSLSPPPPHGLYFSPSAAAVAVARYPKPLTDLPGRTPIFWPGVMQSPHWRDARF
ACSPHALCFTFSDQNSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAY
SLGMTESQVKVWFQNRRTKWRKRHAAEMASAKKKQDSETERLKGASENEDDDDDYNKPLD
PNSDDEKITQLLKKHKPNSSLLIHTSENDSS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgttagccgtgggacagatggacgggtccagacagagcgctttcctcttaagcacccca
cctttagcagctctgcatagcatggcggagatgaagaccccactctacccagcctacccg
ttatcttccaccgggccggcctcttctacctcacctactgccacctctccaaaccccggt
ggcatcccggtgtcctcaccggggatcaaaccatcctccggaatgtcatctctcggatcc
ccccatcaatgcagcgcgctaggaacacctcatggaataaacgacatcctcagtcgtccc
tcgatcctttccccaggagctgctgctgccgttgctgcgtcctcttctgccggaatcttg
tccggaatgccccgcttcagtagcttgagccccccgccaccccatgggctctacttcagc
cccagcgctgcagcagtggcagtggctcgctaccccaagccgttgacagaccttccaggc
aggaccccgatattctggccaggagtcatgcaaagcccacactggagagacgccagattc
gcatgttcaccccatgctttatgttttacattttcagatcagaattctgtactgctcgac
aaagatggaaaaagaaaacatacacgtcccaccttctctggacaacaaatctttgccctg
gaaaagacttttgaacaaacgaaatacctcgctgggccagagcgagcacgactggcctac
tcgttgggaatgacagagagccaagtgaaggtgtggtttcaaaaccgaagaactaaatgg
agaaaacggcacgcggctgagatggcttcggcaaagaagaagcaggattctgagaccgag
aggctgaaaggggcttcggagaacgaagatgatgatgatgattataacaagccgttggac
cctaactcagacgacgagaaaataacacaactactgaaaaaacacaaaccaaactcctca
ctccttattcatacgtcagaaaacgacagttcgtag
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