Oncorhynchus mykiss (rainbow trout): 110523815
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Entry
110523815 CDS
T07259
Symbol
pum3
Name
(RefSeq) pumilio homolog 3 isoform X1
KO
K14844
pumilio homology domain family member 6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110523815 (pum3)
03009 Ribosome biogenesis [BR:
omy03009
]
110523815 (pum3)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
110523815 (pum3)
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
110523815 (pum3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF
PUF_NOP9
Bmt2
RXT2_N
Motif
Other DBs
NCBI-GeneID:
110523815
NCBI-ProteinID:
XP_021458525
Ensembl:
ENSOMYG00000044752
LinkDB
All DBs
Position
5:40601135..40613837
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AA seq
648 aa
AA seq
DB search
MSSEFLRMEPKKKIFSPKGGKKLIQKGKEGTGKPGTKPTGKSPGKRPFKPHSGEKGKTFE
KTGGKGAPRKFLNKKPTDGKYIKPTDGKFTKKRKFIPGKAEEGSEAKKPKWDEFKQQKKE
LKQNRQQTEKKESYQIVSRAKQVWEMVRRKDCNKEKRIKLMKELQELVKGKIKTIAFAHD
STRVLQCFIQFGNDEQRREVFDELKDDMVELSKSKYARNIVKKFLMYGSKEQVAGVMVGF
KGKVRQMLRHSEASSVVEYAYNEKAILSQRLMLTEELYGTTFQVFKSAVCPTLEKVLEAN
PDKVNGILEEMKQILTPMATKEAVIKHSLVHKVFLEFFLHAPAKQRTEMIESIRESVVYM
AHTHDGARVAMHCLWHGTPKDRKVIIKTMKTYIEKFAMGEFAFLVLIAAFDCIDDTKLVK
QAVLSEIFASLPDVITNKNGKKVLLYLLSPRDHAHLLPEIIQVLEKGDGNAHSKKDVALR
RKELLEAVSPHLIQHLCDHARTMAMDKASSVTVTVILGSAIGDLHPAMEAVAELAADDFT
PGGVEGQLHMAEHPAGHLVLKWLIEQDTKMKEVGREERFSRVLLDKVGMDKLKTWAAVNR
GAIVLCCLLNSADETVAEEVREALKAYAPELQKIQNCKGVEVLLEKLA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgagttcttgagaatggaacccaaaaagaaaatattttcccctaaaggtggc
aagaagttaatacagaaaggaaaagaaggtacaggtaaaccggggaccaaaccaacaggt
aaatcaccagggaagaggccatttaaaccccacagtggagaaaagggcaagacgtttgag
aagactggaggaaagggggctccacggaaattcttgaacaaaaaacccacagatggaaag
tatatcaaacccacagatggaaagttcaccaaaaagcgaaaattcatacctgggaaggct
gaggaaggttctgaggccaagaagcccaaatgggacgagttcaaacagcagaagaaagag
ctgaaacaaaaccggcagcagactgaaaaaaaggagagttatcaaatagtgagcagagcc
aagcaagtgtgggagatggtcagaaggaaagattgcaacaaagagaagaggatcaaactc
atgaaagagcttcaggaacttgtgaaaggaaagataaaaacaatagcatttgctcacgac
tccaccagagtcctccagtgtttcatccagtttgggaacgacgagcaaaggcgggaggtt
tttgatgaactcaaggatgatatggtcgagctgagtaaatcaaagtatgcccgaaatatt
gtgaagaagttcttaatgtatgggagcaaagagcaggttgcgggtgtgatggtgggcttc
aaggggaaagtgaggcagatgctgcgtcactctgaggcgtcgtcggtggtggagtacgct
tacaacgaaaaggccatcctctcccagagactcatgctcaccgaggaactctacggaacc
acattccaagtcttcaagtcggcagtgtgccccacgctagagaaggtgctggaggcgaac
ccagacaaggttaatggcattttggaggagatgaagcagatccttacccccatggccaca
aaagaggctgtgatcaaacattctctggtgcacaaagtgtttctggaattcttcctgcat
gccccagccaaacagaggactgaaatgattgaatcaataagggagtctgtggtgtatatg
gcccacacccatgatggagctagagtagcaatgcactgcctgtggcatgggacacctaag
gacagaaaagtcatcattaaaaccatgaagacctacattgagaagtttgcaatgggagag
tttgcgttcttagtcctcatcgctgcctttgactgcatagacgacaccaagctagtgaag
caggccgtcctatcagagatttttgcttccctgcctgatgtcatcactaataagaatgga
aagaaagttctgctgtacctgctcagcccgcgagaccacgcccacctgttacctgaaatc
atccaggtgctggagaagggggatggaaacgcccacagcaagaaggatgttgcccttcgc
cggaaggagctcctggaggcggtgtccccgcacctaattcagcacctgtgtgaccacgcc
cgcactatggcaatggacaaggcctccagcgtcacagtcaccgtcattctggggtccgcc
attggggacctgcatcctgccatggaggctgtggctgagctggctgctgacgacttcaca
ccaggaggagtggaggggcagctgcacatggctgaacaccctgctgggcatctggtgctc
aaatggctgattgaacaagacaccaagatgaaggaggttgggagagaagagcgtttctcc
agggtcctgttggacaaggtagggatggacaagctaaagacgtgggctgcagtgaaccgt
ggggctatcgtgctctgctgtctcctgaacagtgcagatgagactgttgcagaggaggtt
agggaggcgttgaaggcctacgctccagaactacagaagatccagaactgtaaaggagtg
gaagttcttttggagaaactggcctga
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integrated database retrieval system
