KEGG   Oncorhynchus mykiss (rainbow trout): 110523830
Entry
110523830         CDS       T07259                                 
Name
(RefSeq) BRCA1-associated protein isoform X1
  KO
K10632  BRCA1-associated protein [EC:2.3.2.27]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110523830
Enzymes [BR:omy01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110523830
Ubiquitin system [BR:omy04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110523830
SSDB
Motif
Pfam: BRAP2 zf-UBP zf-RING_2 zf-C3HC4_2 zf-rbx1 zf-RING_5 zf-C3HC4 zf-RING_UBOX zf-RING_11 RRM_1 Crescentin CENPH Tropomyosin zf-C3HC4_3 NET2A V_ATPase_I zf-ANAPC11 Sec10_N ATG16 DUF1664 UPF0242 YabA
Other DBs
NCBI-GeneID: 110523830
NCBI-ProteinID: XP_036833411
Ensembl: ENSOMYG00000000080
UniProt: A0A060XDH9
LinkDB
Position
5:complement(41056417..41069342)
AA seq 600 aa
MSVSLVVIRLELADQSLSPRNFQYTAAEDMSEEDLQEKALGSARLSLSGKTELERAAVLH
QHIGSRAMGDMVIETIAPNPDKGKVEQTGAEGEEGGGARPLENQPDERDPNEGTTEDSAD
GTETAPDSPSKHLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLTEDVRRSAMLCILTVP
STMTSHDLMKFVAPFYDVMEHMKIIRDPTPNQYMVLIKFSSQADADSFYTACNGRTFNSI
EDAVCQLVYVERAEVIKSEQGASLPVMELTELPKCTVCLERMDESVNGVLTTLCNHSFHS
LCLQRWEDASCPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHF
EETQHTYAMQLTNHRVWDYAGDNYVHRLVASKTDGKMVQYGCEGETCHEEKIDALQLEYS
YLLTSQLESQRIYWENKIVHLEKDTAEEINNMKAKFKETIDRCDNLERRLGELAKDKQSM
DKKCGQLSTRVTKLGHELKEEQEMNRCLRANQVQLQAQLAEEERKARETGERKDGVIAEL
QEQLRDVMFYLETQQQIEGLPPETRTEIQEGSINIGAAATPAPGPSAIGRGRRGRSKRGK
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgagtgtatcactggtcgttatccgtctggagctcgcagaccagtctctctctccacgg
aatttccaatacaccgccgctgaggatatgtcagaggaggatttgcaggagaaagctctg
ggctcagccaggctttctctgagtgggaagacagaactggagagagcagcagtcctacac
cagcacatcggcagcagagccatgggagacatggtcatcgagaccatcgcacccaaccct
gataaaggaaaggttgagcagactggggcagagggagaggagggtggaggagcccgccct
ctagagaatcaaccagacgagagggaccctaatgagggcactacagaggacagtgccgat
ggcacagagacggctccagactcgccctccaagcatcttccagaccagatctccttcttc
agtggaaacccctcagtggagatagtccacggcatcatgcacctctacaagaccaacaag
atgacgtccctgacggaggacgtgcgtcgcagtgccatgctgtgtatcctgaccgtcccc
tccaccatgaccagccacgacctcatgaagtttgtggcaccattttatgacgtcatggag
cacatgaagatcatacgagaccccacccctaaccagtacatggtgctgattaagttcagt
agccaggctgacgcagatagtttctacacagcgtgtaatggccgtacgttcaactccata
gaggacgcagtctgccagctggtctatgtggagagagctgaggtcatcaagtctgagcag
ggcgccagtcttccagtgatggagctgacagagcttcctaagtgtaccgtgtgtctggag
aggatggacgagtcagtgaacggggttctcaccacactctgtaaccacagcttccacagc
ctgtgtctgcaacgctgggaggacgcctcgtgtcctgtgtgtcggtactgccagacccca
gagcctgtagaggagaacaagtgctttgaatgtggcgtacaggaaaacctgtggatctgc
ctgatctgtggtcatattggctgtggtcgctacgtcagtcgtcatgcctacaaacacttt
gaagagacgcaacacacgtacgccatgcagctcactaaccaccgtgtctgggactatgct
ggagataactacgttcacaggctggtggccagtaagactgatgggaagatggttcagtac
gggtgtgaaggagaaacctgccatgaggagaagatagatgctctgcaattagagtattct
tacctgctaacgagtcaactggagtcccagcgcatttactgggagaataagatagttcac
ctggagaaggacacagcggaggagatcaacaacatgaaggccaagtttaaggagaccata
gatcgctgtgataacctggagcgtcggctgggagagctggccaaggacaagcagagcatg
gacaagaagtgtggtcagctgtcgacccgtgtgacaaagcttggtcatgagctgaaggag
gaacaggaaatgaaccgctgtctgagagccaatcaggttcaactacaggcccagctggcc
gaggaggaacgcaaggcgagagagacgggcgagcgtaaggacggggtgatagccgagctc
caggagcagctgagagatgtaatgttttacctggagactcagcagcagatagaaggtctt
cctccagagaccaggactgagattcaggaaggaagcatcaacatcggcgcagcagccact
cccgccccaggaccctccgccataggcagaggccgcagggggcggtccaaaagggggaag
tag

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