Oncorhynchus mykiss (rainbow trout): 110523850
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Entry
110523850 CDS
T07259
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X6
KO
K26273
protein strawberry notch
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110523850 (sbno1)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110523850 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
OspG_kinase
Motif
Other DBs
NCBI-GeneID:
110523850
NCBI-ProteinID:
XP_021458593
Ensembl:
ENSOMYG00000007077
ENSOMYG00000013783
LinkDB
All DBs
Position
5:41522219..41555656
Genome browser
AA seq
1394 aa
AA seq
DB search
MMDPGQDLLLAALSESGICPNDLFDFDPQDAALPSPTPQSISINALGVGSGMEAMAPPTP
AVSIRHKPQPSTTTFVLNQLNQLPSLGTIVVTKPSTGGTARHTITVTKVVHSAPSALRGS
SSTLTYSTALPSPVSTVVPSNREQIQLKDLLRTGSTMKSSSLVELMRLKPPPDIAQPVAT
ATATGTTELNNGIKKEVSSKDVARIWVNDDMKVRSFSPTLKLPGMEEEAEEEEDEELGHA
ETYAEYMPMKLRIGLRHPDPVVETSSLSSVKPPNVWYRMSIPEETVDRGWLSALQLEAIT
YAAQQHETFLPNGDRASYLIGDGAGVGKGRTIAGIIYENYLLGRKRSLWFSVSNDLKYDA
ERDLKDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRFK
QLLHWCGEDFDGVIVYDECHKAKNVCPIGSSKPTKTGLAVLELQNKLPKARVVYASATGA
SEPRNMAYMNRLGIWGEGTPFREFSNFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFT
GVTFKIEEVPLTTHYIKMYNKSVRLWVAAREKFQAAANLMEAEQRMKKSMWGQFWSAHQR
FFKYLCIASKVRRVVQLAREEVKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKG
VLQSLIEKHFPAPDRQKLFSLLGIDLSVKKTPSPSEAAAEQKGKKRKGAEIKKPEKRKRK
SGGLSGSSSDDSESEESDKDDAESDDSFKSVSSGEDDDDFNPFKDDSSEDEEDDPWLSGK
RKEAKKGKEKMNKKKKKKKSIDPDSIHSALLASGLGSIRPAFTTPIVKTSSTPAIAKVEA
DDSCMTSQDAVEDAQQMKRDLLDQLEKLAQDLPPNTLDELIDELGGPDNVAEMTGRKGRV
VSNDDGSISYESRSELDVPVEILNLTEKQRFMDGEKNIAIISEAASSGISLQADRRVKNQ
RRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLG
ALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPLVNPPSDFEGDFYKEIRH
GLIGVGLINVEDRSGILSLDKDYNNIGKFLNRILGMAVQEQNALFQYFSDTLAAVIQNAK
KNGRYDMGILDLGSGDEKVKKIEAKKFLTPGYSTSGHVELYTVSVERGMSWEDATHAWAE
QSGPDDGFYVQIRNNKKTAILVQEVNSKKRLFLVYRPNTGKQLKLEAYTDIKKKCKKVLS
DDAKQHWIDQYKSSAEICAHAYWRGNCKKASVGLQCEVGLRCRTYYVLCGSVLSVWTKVE
GVLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLTNILSSSDQSQQLAVQQQQKW
QQLHPQSLSHVHNT
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcctggacaggatttgctcttggcagccctgagcgagagcggaatctgccct
aacgacctgttcgactttgaccctcaggatgctgctcttccctctcccaccccacagtcc
atctccatcaatgccctgggtgttggctcagggatggaggcaatggctccacccacacct
gcagtctcaatcaggcacaagccccagccctcaactaccacatttgtcttaaatcaactg
aatcagttgccatcactgggaacaattgttgtgaccaagccctcaactggaggcacagcc
agacacaccatcacagtcactaaggtggtccattcagctccctcagccctgcggggatcc
tcatccacacttacctactccactgctctcccctccccagtctccacagtggttccttcc
aacagagagcagatccagctgaaggacctgttgaggaccggcagcaccatgaagagcagt
agtctggtggaactcatgaggctcaagccaccgccagacatcgcccagccggtcgccacg
gcaacagccacaggcaccacggaactgaacaacgggataaagaaggaggtgtcaagtaaa
gatgtcgctcggatctgggtgaacgacgacatgaaagtgcggagcttctcacctacacta
aaactcccaggaatggaggaggaggctgaggaagaggaggatgaagagttgggtcatgct
gagacatacgctgagtacatgcctatgaaattgaggatcgggctgcgtcacccagaccca
gtggtggagaccagctccctgtccagtgtgaagcctccaaacgtttggtacagaatgtcc
ataccagaggagactgtcgatcgcggctggctgtctgctctgcagctggaggccatcaca
tacgctgcccagcaacatgagacattcctccctaatggcgaccgagcgtcctatctgata
ggagacggggccggagtaggcaagggccggaccatcgctgggatcatctacgagaactac
ctcctcggtagaaagaggtcactctggttcagtgtttctaatgacctgaagtatgatgcg
gagagggatctgaaagacataggagccaagaacattcaggtccattcactaaacaagttt
aagtatggtaagatctcgtccaaacacaatggcagtgtgaagaagggggtgatcttcgct
acctactcctctctgatcggagagagccagtctggagggaagtacaagacccgcttcaaa
cagctgctccactggtgtggagaggacttcgacggagtcattgtatatgacgagtgtcac
aaagccaaaaatgtctgtcccatcgggtcatccaaacccaccaagactggactggcagtc
ctggagctgcagaacaaactgcccaaggcacgggtggtgtacgctagtgccactggtgcg
tctgagccccgtaacatggcctacatgaaccggctgggaatctggggagaggggacacct
ttcagagagttcagcaactttatccaggctgtggagcgcagaggtgttggtgccatggag
atagttgccatggatatgaagctgagggggatgtacattgccaggcagctgagtttcaca
ggtgtcacgttcaagattgaggaggttcccttgacaacccactacatcaagatgtacaac
aagtctgtacgcctgtgggtggctgcgcgggagaagttccaggcggctgctaacctgatg
gaggcagagcagcggatgaagaagtccatgtggggtcagttctggtcggcccaccagagg
ttcttcaagtacctctgcattgcctccaaggtccgcagggtggtgcagcttgccagggag
gaggtcaaaaacggaaagtgtgtcgtgattggtcttcagtcgacaggagaggccagaaca
ctggaggccctggaggaaggaggaggagagctgaacgactttgtttccaccgcaaaaggt
gttctgcagtccttgatagagaagcacttccctgctccagacagacaaaagctgtttagt
ctgctgggcatcgacctgtcggtcaagaagacgccatcgcccagcgaggccgccgcagag
caaaagggcaagaagaggaaaggtgctgagataaagaaaccagagaagcggaagagaaag
tctggtggtctgtcagggagcagctctgacgacagcgaatcggaggagtctgataaggat
gatgcggagagtgacgacagtttcaagtcggtcagctcaggagaagatgatgatgacttc
aaccccttcaaggatgattccagcgaggatgaggaggatgacccctggctgtctggaaag
aggaaagaggcgaagaaaggcaaggagaagatgaataaaaagaagaaaaagaagaagagc
attgacccagactctatccacagtgccttgttagcctctggtctgggctccatcaggcct
gcttttaccacccccatagtcaagacctccagcacacctgccatagccaaggtagaggca
gatgacagctgtatgaccagtcaggatgctgtggaagatgctcagcagatgaagagagat
ctgttggaccagctggagaagctggctcaggatctaccccccaacactctggatgaactc
atagacgagctgggaggaccggacaatgtggctgagatgacaggccgtaaaggtcgggtg
gtcagtaacgacgacggcagcatctcttacgagtcccgctctgaattggatgttcctgtg
gagatcctcaacctcacagagaaacagaggttcatggacggagagaaaaacatagccatc
atctcggaggcggctagctccggtatctccctgcaggctgaccggcgggtgaagaaccag
aggaggagggtccacatgaccctggagctgccctggagtgcagacagagccatacagcag
tttgggaggacccataggtctaaccaggtgacagctccagagtacgtgttcctcatctct
gagctggctggggaacagaggtttgcctccattgtggccaagagactggagagcctgggt
gccctcacgcatggagacagaagagcaacagagacgagagatctcagcaggttcaacttt
gacaacaaatatggcagaaatgcactggagatcgtgatgaagtctattgtcaacctggac
tctccgttagtgaatcctccttcggacttcgaaggggatttctacaaagagatccgtcat
gggttgatcggagtgggtctgatcaatgtggaggaccgatcagggattctgtctctggac
aaagactacaacaacatagggaagttcctgaaccgtatcctagggatggcagtgcaggag
cagaacgctctgttccagtacttctctgacactctggcagctgtcatacagaacgccaag
aagaacggacgctacgacatgggcatcctggacctgggttctggggatgagaaggtgaag
aagattgaagccaagaagttcctgaccccaggctactccacctcaggacatgtggagctc
tatacggtgagtgtggagagaggcatgtcctgggaggatgccacccatgcctgggccgag
cagagtggaccagatgatggcttctatgtacagataaggaacaacaagaagacagccatc
ttggtgcaggaggtgaacagtaagaagaggctgttcctggtctatagacctaatacggga
aaacagcttaaactggaagcctacactgacatcaagaagaagtgtaaaaaggtgctctca
gatgatgccaaacagcactggattgaccagtacaagtcttcagctgagatctgcgctcat
gcatactggcgtggtaactgtaagaaggcgtcagtgggtctgcagtgtgaggtgggtctg
cgctgcaggacgtactatgtgctgtgtggctctgtgctcagcgtgtggaccaaggtggag
ggggtcctggcctccgtcagcggaactaatgtcaagatgcaaatcgtccgcctcagaaca
gaggacgggcagaggatcgtgggcctgatcattccagcgaactgcgtctctcctctgacc
aacatcctgtcatcatctgaccagtctcagcaactggctgttcagcagcagcagaagtgg
cagcagctgcaccctcagagcctcagccacgtacacaacacatag
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