Oncorhynchus mykiss (rainbow trout): 110523861
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Entry
110523861 CDS
T07259
Symbol
sec31a
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110523861 (sec31a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110523861 (sec31a)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
omy02044
]
110523861 (sec31a)
Membrane trafficking [BR:
omy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110523861 (sec31a)
Secretion system [BR:
omy02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
110523861 (sec31a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
Beta-prop_HPS5
TPR_Sec16
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Prp18
SAP_new25
Motif
Other DBs
NCBI-GeneID:
110523861
NCBI-ProteinID:
XP_036833451
Ensembl:
ENSOMYG00000018142
LinkDB
All DBs
Position
5:complement(41961128..41985683)
Genome browser
AA seq
1597 aa
AA seq
DB search
MERMKLKEINRTAIQSWSPAQHHPVYLAAGTSAQQLDASFSTSASLEIFELDLAEPSLDM
KLRGAYSSSHRYHKLAWGPHGMDAQGLPSGVLIAGGENGDVILYDPAKIIAGHGDVVIAQ
SNKHSGPVRALDVNSFQDNLVASGGNESEIYIWDLNNFGSPMTPGPKTQPLEDISCVAWN
RQVQHILASASPSGRASIWDLRKNDLIIKVSDHSNRMHCSGLEWNPEVATQLVLASEDDR
MPVIQIWDLRFATSPLKVLENHTRGVLAIAWSLADPELLLSCGKDNRILCWNPNTAEVLY
ELPTSTQWCFDIQWCPRNPAVLSAAAFDGHISIYSIMGGSSQAFSQTQADTISTSFGNMD
PFGMGQTLPPLQLSQAPPASTTITPLKKPPKWIRRPVGASFAFGGKLVSLENIKPNPQQP
QQPTAHVVHISQVITETTFLERSAQLQATLAAGSFVDFCQEKMDSAQNEFEKTVWSFLKV
NFENDARGKYLELLGYKKEELAAKIAAALEGEPIQPEEPSTAPAPTSVPEPEADPGPEPE
VVPFPAPQLNTEPEVLPPMPEAATVEPTPEPPLEPALQPEPGPQPELAPPPSGDLSASDP
MPVLQSEPVLTLDLSAEPQLLAPVAPVALLSESDPTLAPPALPPPADLQQAPMFDPTAPF
SLQPPTEFNQVNSLPVSEFNQVDLQAVPVFDPTSTMPSLQSAVQLDLAPPVSTLQPLADP
GLPPEDPFDLIAAANLQPAAEVELTPAPEAEDPFDLIAATNLQPAAEVELSPAPEAEDPF
DLIAAANLQPAAEVELSPAPEAEDPFDLIAATNLQPAAEVELTPALEPEAEDPFDLIAAA
NLQPAAEVEVTGRLEPLAAEVDLTEGLGAEPIAQEEMPVNEEIPLEEEAAPPAEASLPGE
APVPEGIKLRVSQGVDGLITQALLTGDFQGAVELCLHDNRMADSIILAIAGGAELLEKTQ
RKYFTKTHSKITKLISAVVMRDWRDVLQTCELQNWKEALAAVMTYAQPEEFSSLCDLLGC
RLEAVEDCTLQAQACLCYICAGNVEKLVTCWTRAQDRHCPLSLQDLVEKVVVLRKAVEQN
QESDPCAVGLLLGEKMSQYASLLASQGSLTNAIAYLPQNTEQVAVQQLRDRLSRALGQQA
PAAAPVAQLPSPQPTAAQPRQLFTPAQPSMVTQQPALAPVPAAATAPQQYYQPVRSASTV
TSWSNQTPTALPSVPPPHLGPATTEPQVQPTPPMYGMPPSGSAAPPASSSAAYPPMYSHQ
YQPYPPASQYNLGTGGPAIYSPLQYSAPPPPSFSSSSPQAPAPGFMPQYTQQPLYPPPSM
GQPVSSAPPFSPPPLSSGASFQHGGPGSPASYMPPLPPTGSSEGYNPDTTCFMEGEGPQN
GWNDPPTLSRVPKKKKVPENYTPPSPIMAPIFSPLGAGDPQQPPYMPPGQAQNQAPYQGM
QQQMAPPPMNPGMLKTRGGSVEGAPGAPTGDTIQPLQSIPAEKITMKPIPDEHLVLKNTF
EGLIHKCLAAATDPQTKRKLDDANKRLEALYDKLREQTLSPAIIGGLHNMVQCIESRSYV
ESLNIHTHIVSSSNFSETSAFMPVLKVVLTQANKLGV
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atggaacgaatgaagctcaaagagatcaaccgcacggccatccagagctggagcccagca
cagcaccatcctgtgtacctggcagcaggtacgtcagcccagcagctggatgcctccttc
agtacctccgcctctctggagatctttgagctggacctggccgagccttctctggacatg
aagctccgtggagcatactcctcctctcacagataccataagctggcgtggggtccccac
ggcatggatgcacagggtctcccgtctggagtgctcatcgcagggggagagaacggcgac
gtcatcctttacgacccggccaagatcattgctggacacggtgacgttgtcatcgctcag
agtaacaaacacagcgggccagttagagcccttgatgtcaactccttccaggacaacctg
gtggcttccggaggtaacgaatcagagatctacatctgggacctaaacaactttggctcc
ccgatgacaccaggccctaaaactcagcctctagaggacatcagctgtgtggcgtggaac
aggcaggtccaacacatcctggcctcagccagccccagcggccgcgcctccatctgggac
ctccgcaagaacgacctaatcatcaaagtcagcgaccacagcaacaggatgcactgctct
gggctagaatggaaccccgaggtagctactcagctggtgctggcctcggaggatgacagg
atgccagtgatccagatctgggacctgcgttttgccacctcccctctcaaagtcctggag
aaccacacacggggtgtcctggccatcgcctggagcctggcggaccctgagctgctactg
agctgcgggaaagacaaccgaatcctctgctggaaccccaacaccgccgaggtgctgtat
gagctgcctaccagtacccagtggtgctttgacatccagtggtgtcccaggaacccggcg
gtgctgtcggccgcagccttcgacggacacatcagcatctactccatcatggggggcagc
agccaggctttcagccagacacaggcagacacgatcagcacgtcatttggcaatatggat
ccatttgggatgggtcagacccttccccccctgcagctttcccaggccccgcccgcctcc
accaccatcacccccctcaaaaagccccccaagtggatccgcaggcccgtgggggcctcc
ttcgcttttggtggtaagctggtgtcgttggagaacatcaagcccaacccccaacagcct
cagcagcccacggcccatgtggttcacattagtcaggtgattacggagacgaccttcctg
gagcgctctgcccagctgcaggccacactggctgctggcagcttcgttgacttctgccag
gagaagatggactcggcccagaacgagtttgagaagaccgtctggtccttcctgaaggtg
aactttgagaatgatgctcgtggaaaatacctggagcttttgggatataagaaggaggag
ctagcagcaaagattgcagcagcattagagggagaacctattcagcctgaggagccctcc
actgctcctgcccccacctctgtgcctgaacctgaggctgatcctggaccagaaccagag
gtagtgccttttcctgctccccagctcaacacggagcctgaggtccttcctcccatgcct
gaggctgctactgttgagcccacccccgaaccgccgcttgagcccgccctccagcccgaa
cctggaccccagccagagcttgctcccccgcccagcggtgacctttcagcttctgatcct
atgcctgtcctccaatcggagcctgttcttactcttgacctcagcgcagaaccccagctt
cttgcccctgttgctcccgttgctctcctgtcagagtctgaccctactctggccccccca
gctctgccccccccagctgacctgcagcaagcacccatgtttgatcccactgcccccttt
tccctccagcctccaacagagttcaaccaagtgaactcactgcctgtatctgaatttaac
caggtggacttacaggctgtacccgtcttcgacccgacatcaacaatgcccagtctgcag
tcggcagtccagctggacctggctcctcctgtatccaccttgcagcctctagcagaccct
ggactcccgcctgaagatccatttgacctcatcgctgctgcaaacctccagccagcagca
gaagtggaactcacacctgctccagaagcggaagatccatttgacctcatcgctgctaca
aacctccagccagcagcggaagtggaactctcacctgctccagaagcggaagatccattt
gacctcatcgctgctgcaaacctccagccagcagcggaagtggaactctcacctgctcca
gaagcggaagatccatttgacctcatcgctgctacaaacctccagccagcagcagaagtg
gaactcacacctgctctggaaccagaagcggaagatccatttgacctcatcgctgctgca
aacctccagccagcagcagaagtggaagtgacaggacgtctggaaccattggcagcagaa
gtagacctaacagaaggccttggagctgagcccatcgcccaggaagagatgccagtaaat
gaagagattcctctggaggaggaggcggctccaccagcagaggccagcctgccaggggag
gctccagtcccagagggcattaaactccgcgtcagtcaaggtgtggatggcctgatcacc
caggccctgctgacgggtgacttccagggcgcagtggaactctgtctccatgacaaccgc
atggctgacagcatcatcctggccatcgccggaggggcggagcttctggagaaaacacag
aggaagtacttcaccaagactcacagcaagatcaccaagctgatcagtgcggtggtgatg
agggactggcgtgacgtgctgcagacctgtgagctgcagaactggaaggaagctctggct
gcagtcatgacctatgctcagcccgaggagttctcctctctgtgtgacctgctgggctgc
agactggaggctgtggaggactgcacgctgcaggctcaggcttgtctgtgttacatctgc
gctggcaacgtggagaaactggtgacctgctggaccagagcacaggacagacactgccct
ctctctctgcaggatctggtcgagaaggtggtggtgctccgcaaggcggtagagcagaac
caggagtctgatccctgtgctgtggggcttctactgggggagaagatgagtcagtatgcc
agcctgctggcctcccagggcagcctcaccaacgccattgcatacctgccccagaacaca
gagcaggttgcggtgcagcagctgcgtgaccgtctcagcagagctctgggtcaacaggct
ccagctgcagccccagtagcccaactcccatcccctcagcccacagctgcccagcccagg
cagctcttcacccctgcccagccttctatggtgacccagcagcccgctctggcccctgtg
cctgccgctgccaccgcaccgcaacagtattaccagccggtgaggtctgcctctacagtt
acctcctggagtaaccaaactcccacagctctccccagtgtccctcctcctcatctaggc
cctgccaccacagagccccaggttcagccgacaccccccatgtatgggatgcctccctct
gggtcagctgctcccccagcctcctcgtctgctgcatacccccccatgtactcacatcag
taccagccctaccctccggccagccagtacaaccttggtactggtggcccagctatctat
tcacctctccagtactctgctcctcctcctccctccttctcttcctcctcaccccaagcc
ccagccccaggcttcatgccccaatacacccaacaacccctctacccacctccttccatg
ggccagcctgtgtcctccgctcctcctttctctcctcctccgctgtcatctggagcgtct
ttccaacatggcggaccgggttcgcctgcctcatacatgccgccgctcccaccaaccgga
tcctcagagggatataatccagacactacctgtttcatggaaggtgaaggcccacagaat
ggctggaacgacccgcctaccctgagcagagtgccaaagaagaagaaggttccagagaac
tacacgcctccttcccccatcatggcccccatattttctcccctcggtgctggggacccc
cagcagcccccctacatgcctccaggccaggcccagaaccaggccccctaccagggcatg
cagcagcagatggcccccccacccatgaaccctggcatgctcaagacgcgtggaggaagt
gtggagggagcgcccggagctccgactggagataccatacagccgctgcagtccatccct
gctgagaagataaccatgaagcccatccccgatgagcacctggtcctgaaaaacaccttt
gagggcctcatccacaagtgcttggctgctgccaccgatcctcaaaccaagaggaagctg
gatgacgccaacaaacgccttgaggccctctacgacaagctacgagagcagaccctctcc
ccagccatcatagggggcctgcacaacatggtacagtgcatcgagtctcgatcctacgtg
gagagcctcaacatccacacacacatagtgagcagcagcaacttcagcgagacgtctgcc
ttcatgcctgtgctcaaggtggtgctgacacaagccaacaaactgggggtctga
DBGET
integrated database retrieval system
