Oncorhynchus mykiss (rainbow trout): 110523870
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Entry
110523870 CDS
T07259
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM23
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110523870
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
omy04031
]
110523870
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110523870
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110523870
GTP-binding proteins [BR:
omy04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
110523870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-B_box
zf-RING_5
Gtr1_RagA
zf-RING_2
MMR_HSR1
zf-C3HC4
CEBP_ZZ
PVC11-like
Motif
Other DBs
NCBI-GeneID:
110523870
NCBI-ProteinID:
XP_021458645
Ensembl:
ENSOMYG00000020206
LinkDB
All DBs
Position
5:complement(42276019..42291052)
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AA seq
579 aa
AA seq
DB search
MAVAMGVNKXGTAATMDVCVRHGRGATGNTVKVLECGVCEDVFSLQGDKVPRLLLCGHTV
CHDCLTRLPLHGRAVRCPFDRQVTELGDSGVWGLKKNFALLELLERLQNGASNQLGVAED
SLKGMGESVIRCDEDESHTASMYCTVCATHLCANCSQLTHSTRTLAKHRRVPLADKPHEK
TLCPQHQVHAIEFVCQEEICQPGPLMCCVCKEYGKHQGHKHVVLEAEANQIRASILDMAH
CIRTFTEEVSEYSRKLVGIVQQIEGGEQTVDDGIGMAHTEHVPGTAESARSCVRAYFADL
HETLCRQEEMALSVVDAHVRERLIWLRQQQEDMAILLSQVSTACLHCERTLQQDDCRVVL
AKQEINRLLETLQKQQQQFTELADHIQLDAGIPVTFTKDNRVHIGPKMEIRVVTLGLDSA
GKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAV
VFVIDSCHRDRLMEAHSELAKLLTEKELRDALLLIFANKQDVPGAESVEEMTELLSLHKL
CCGRSWHIQGCDARSGTGLYEGLDWLSRQLVAAGVLDVA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgctatgggtgtgaacaaanncgggacagcagcaacgatggacgtctgtgtt
cggcacggcagaggggccacaggcaacacggtgaaggtgttggagtgtggtgtgtgtgag
gatgtcttctctctccaaggggacaaggtcccccggctgctgctctgcggtcacacggtc
tgccatgactgtctgacccggctgcccctgcatggtagagccgtccgctgcccctttgac
agacaggtcactgaactgggtgactctggtgtgtggggtctgaagaagaactttgctctg
ctggaacttctggagaggctgcagaatggagcgtccaaccagttgggcgtggcagaggat
tccctcaaaggcatgggagagagtgtaatccgctgtgacgaggatgagagccacacggca
tctatgtactgcacggtgtgtgccacccacttgtgtgccaactgctcccagctcacccac
tccacccgcaccctggccaagcaccggcgggtacccctggcagacaagccccacgagaag
actctgtgcccgcagcatcaggtccacgctatcgagtttgtctgtcaggaggagatctgc
cagcctgggccgctcatgtgctgcgtgtgcaaagagtacggcaagcaccagggacacaag
catgtggttctggaggcagaagccaatcagatccgtgcatccatcctggacatggcccac
tgtatccggacgttcacagaggaggtgtcggagtattccaggaagctggttgggatcgta
cagcagattgagggaggggaacagaccgtggatgacggcatcggcatggcacacactgaa
catgtcccaggcacggcagagagcgcccggtcctgcgtacgggcctacttcgccgacctc
cacgagacactgtgcagacaggaggagatggcgctcagcgtagtggacgcccacgtcaga
gagagactcatctggctccggcagcagcaggaggacatggccatcctgctttctcaggtc
tccactgcctgcctgcactgtgagagaactctgcagcaggatgactgcagggtggttctg
gccaagcaggagatcaacagactgttggagactctgcagaaacagcagcagcagttcact
gagctggccgaccacatccagctagacgctggtatccccgtcaccttcaccaaggacaac
cgggtccacattggtccaaagatggagatccgggtggtgaccctgggactggatagtgca
gggaaaaccaccatcctcttcaagctgaaacaggacgagtttatgcagcccatccctacc
ataggttttaatgtggagacagtggagtataagaatctcaagttcaccatctgggatgtt
ggtgggaaacataagctacgacctctctggaagcactattacctgaacacacaagcggtg
gtgtttgtgattgacagctgtcacagagacaggctgatggaggcccacagtgagctggct
aaactgctgaccgagaaagagctgagagacgccctactgctcatcttcgccaacaaacag
gatgtccccggggctgagtcagtggaggagatgacggagcttctgagccttcacaagctg
tgctgtgggaggagctggcacatccaaggctgtgacgcccgcagcggcacagggctctac
gagggcctggactggctgtcccgacagctggtggctgcaggcgtactagacgtggcctaa
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