Oncorhynchus mykiss (rainbow trout): 110523885
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Entry
110523885 CDS
T07259
Symbol
hnrpkl
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K, like isoform X1
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110523885 (hnrpkl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110523885 (hnrpkl)
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
hnRNP proteins
110523885 (hnrpkl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_NusA_1st
KH_NusA_2nd
KH_Vigilin
DJ-1_PfpI
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
110523885
NCBI-ProteinID:
XP_021458670
Ensembl:
ENSOMYG00000021325
UniProt:
A0A060XFA2
LinkDB
All DBs
Position
5:42842134..42853080
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AA seq
434 aa
AA seq
DB search
METEIEQQEEETTFSNTDTNGKRPAEDMDEEQAFKRSRNTDEMVELRVLLQSKNAGAVIG
KGGKNIKALRTDYNASVSVPDSSGPERILSVSADIDTIGEILLKIIPTLEEYQHYNGIDF
DCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVVLVGGKPDRVV
ECIKVILDLVSEAPIKGRAQPYDPNFYDETYDYGGFTMIYEERGRRPMGGFPMRGRGGFE
RMPPGRGGRPMPPSRRDYDDMSPRRGPPPPLPGRGGRGGSRARNLPLPPPPPPRGGGDRF
SHQSYHGNMDDRPNSDRRGRPGDRYNSMSGGYGDNNSSWEPFQSGGRGSYSDIGGPVITT
QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITINGTQDQIQNAQYL
LQNRHVLAPFPLLR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaaatcgagcagcaggaagaagagaccacgttcagcaacactgacactaac
ggtaaacgccctgccgaggacatggatgaggagcaggccttcaagcgctctcgcaacaca
gacgagatggttgagctgcgggtactgctgcagagcaaaaatgctggcgccgttatcgga
aagggtggcaagaatataaaagccttacgcacagactacaatgccagtgtatcagtccct
gacagcagtggcccagagcggatcctgagtgtgagtgcagatattgacactatcggagag
attctgctgaagatcatccctactctggaagagtaccagcattataacgggattgatttt
gactgcgagctgcgtttgctgatccatcagagtttggccgggggaatcattggggtgaaa
ggtgccaagataaaggagttaagagagaacacccagaccaccatcaagctgttccaggag
tgctgtcctcagtccactgaccgtgtggttctggttggagggaagccagaccgtgttgtt
gaatgcatcaaagttatcctggacttggtatctgaggctcctatcaaagggcgcgcccag
ccctatgaccccaacttctacgacgagacgtatgactacggcggcttcaccatgatttac
gaagagcggggccggcgacccatggggggcttccccatgcggggcagggggggttttgaa
cgcatgccccccggccgcgggggccgacctatgcccccctccagacgggactatgacgac
atgagccctcgtcggggaccgccccctcccctgccaggtagaggagggcgtggagggagc
cgggctcgaaacctgcccctccccccaccaccacccccaagaggaggaggggaccggttc
tcccaccagagttatcacggcaacatggacgacagaccaaacagcgacaggagaggaaga
ccaggagaccgctacaacagcatgagtggtggatatggtgacaacaattcctcgtgggag
ccctttcagtctggtggccgagggtcatacagtgacatcgggggtcctgtcatcacaaca
caagtgaccatccccaaagatctggccggctccatcatcgggaagggcggccagcggatc
aagcagatccgtcacgagtcgggagcgtccatcaagatagacgagccactagagggctca
gaggaccgcatcatcaccatcaatggaacacaggaccagatccagaacgcccagtatcta
ctgcagaacaggcacgtgctagcaccctttcctcttctccggtga
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