Oncorhynchus mykiss (rainbow trout): 110523911
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Entry
110523911 CDS
T07259
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
omy01100
Metabolic pathways
Module
omy_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
110523911
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
omy01003
]
110523911
Enzymes [BR:
omy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
110523911
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
110523911
Glycosyltransferases [BR:
omy01003
]
Glycan extension
O-Glycan
110523911
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
FAM184
PEP-utilisers_N
Motif
Other DBs
NCBI-GeneID:
110523911
NCBI-ProteinID:
XP_021458728
Ensembl:
ENSOMYG00000031026
UniProt:
A0A8C7SHN1
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Position
5:44405237..44440603
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AA seq
564 aa
AA seq
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MLRRGLLAWVSRVGVLLVLVCCSLSLLYVMTCSPHSEDNLVSHALPRPGLGVAAAGGIGA
GQSGPPGREDYQAMLAEREEQHKLHMASLKKQIAQLKEALQERSEQLKGVQDTMERAAGR
GQGGQSPGGGALGEGGQGPGADRSHTDLQEFLRSQLGRAEVHQGTRLPNEYAVVPFESFT
LQRVYQLEMGLTRHPEEKPVRKDRRDELSEALETALRSLNTPRDGANKGRTTKVYSPSDF
IEGIARTEKDKGTLYELTFKGDQSREFRKLVLFRPFGPLMKVKNERVDTANVPINIIVPL
SQRADKFRHFMHNFREVCVRQDGRVHLTVVYFGKDQMNEVRSTLENTSREINFKNFSLLQ
LNEEFSRGRGLDVGARAWKGGNVLLFFCDVDIYFTADFLNTCRLNAQPGKKVFYPVLFSQ
YNPTLIYGNHDHIPPVEQQLVIKKDTGLWRDFGFGMTCQYRSDFINIGGFDVDIKGWGGE
DVHLYRKYLHSNLLVVRSPSRGLFHLWHEKRCADELPPEQYRMCMQSKAMNEASHGQLGM
LFFRHEIEAHLRKQKPQRSIAKKT
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggaggggtctgctggcctgggtgtcccgtgtgggcgtgctattggtcctagtg
tgctgctctctgtccctcctctacgtcatgacctgcagcccccactccgaggacaacctg
gtgagccatgccctgccacgccccgggctgggggtagcggcagcagggggcataggggcg
ggtcagagcggacccccggggcgggaggactaccaggccatgctagcggagcgcgaggag
cagcacaagctacacatggcgagtctgaagaagcagatcgcccagttaaaagaagcactg
caggagcgtagtgagcagctcaaaggagttcaagacacaatggaacgggcggcagggaga
ggccagggcggacagtccccaggaggaggtgccctcggggagggggggcaggggcctggg
gctgacaggagccacacggacctccaggagttccttcgcagtcagctgggccgggcggag
gtccaccaggggaccagactacccaatgagtatgccgtggtgccctttgagagcttcacc
ctgcagagggtgtaccagctggagatgggcctgaccaggcaccctgaggagaagcctgtg
aggaaggaccggagggatgagctgagtgaagcgctggagacagccctgcggagcctcaac
acaccccgagacggagcaaacaagggccggaccaccaaggtctactccccatcagacttc
atagaaggtatcgctcggacggagaaggacaaaggcactctgtatgagctcaccttcaaa
ggggaccagagccgtgagttcaggaagctggttctgttccgtccctttgggcccctgatg
aaggtgaagaacgagagggtggacacggctaacgtccccatcaacatcatagtgcccctc
tcccagagggccgacaagttcagacacttcatgcacaacttcagagaggtgtgtgtgcgg
caggatgggcgtgtccacctcacagtggtgtattttgggaaggaccagatgaatgaagtc
cggagcactctggagaacacgtctagggagatcaactttaagaacttctccctgctccag
ctgaatgaggagttctccagggggcgtggcctggatgtgggcgccagggcgtggaaggga
ggaaacgtcctcctcttcttctgtgacgtcgacatctactttaccgccgacttcctgaac
acctgccgtctcaatgctcaacctggtaagaaggtcttctatcctgttctgttcagccag
tataacccaaccctgatctacggcaatcatgaccacatcccgccagttgaacagcagctg
gtgattaaaaaggacacaggattatggagagactttggcttcggaatgacatgccagtac
agatcagatttcatcaacataggtggttttgacgtggacatcaaaggttggggtggtgag
gatgttcacctttacaggaagtacctgcacagcaacctgctggtggtccggtccccatcg
cggggcctcttccacctgtggcacgagaagcgctgtgctgacgagctgcccccggagcag
tacaggatgtgcatgcagtccaaggccatgaacgaagcctcacacggccagctgggcatg
ctcttcttccgacacgagattgaagcacacttgcgtaagcagaaaccccagcggtccatt
gccaaaaagacataa
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