Oncorhynchus mykiss (rainbow trout): 110523965
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Entry
110523965 CDS
T07259
Name
(RefSeq) UV excision repair protein RAD23 homolog B isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03420
Nucleotide excision repair
omy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110523965
09124 Replication and repair
03420 Nucleotide excision repair
110523965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
omy03051
]
110523965
03400 DNA repair and recombination proteins [BR:
omy03400
]
110523965
Proteasome [BR:
omy03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
110523965
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
110523965
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Crinkler
Rad60-SLD_2
UBA_Ucp12
Dsc3_N
CUE
Ubiquitin_5
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
110523965
NCBI-ProteinID:
XP_021458821
Ensembl:
ENSOMYG00000036565
UniProt:
A0A8C7TBA5
LinkDB
All DBs
Position
5:46911102..46926945
Genome browser
AA seq
390 aa
AA seq
DB search
MQITLKTLQQQTFKIDIDAEETVKTLKEKIENEKGKDGFPVAGQKLIYAGKILNDDTALK
EYKIDEKNFVVVMVAKPKAAPAAAQPSSATTTTTSSTTVPTVPAAALSGSDNPPEGGKPE
DKPAEERPSNTSAPASTPTSSSDLLANVNMFEEATSALVTGQSYENMVTEMMLMGYEREQ
VVASLRASFNNPDRAVEYLLTGIPAGEEGHVSADPVVPPVGGGTPALNTGSMTTPASTGS
LASAATGANPLGFLVNQPQFLQMRQIIQQNPSLLPALLQQIGRENPQLLQQISSHQEQFI
QMLNEPAQEGGQGGGGVGGGGGGGGVGVGVGGEAGSGMNYIQVTPQEKEAIERLKALGFP
EGLVIQAYFACEKNENLAANFLLQQNFDDD
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcagataacattaaaaactctccaacagcagacatttaaaatcgacatagacgcagag
gagacggtaaaaaccttaaaggaaaaaattgagaatgagaagggaaaagatggttttccg
gttgctggacaaaagttgatatatgcagggaaaatcctaaatgatgacacagccctcaag
gagtataagattgatgagaagaactttgtggtcgtcatggtggcaaagcctaaagcagcc
ccagcagctgcccagccttccagcgctaccacgaccaccacctccagcactacagtcccc
acagtacccgctgctgccttgtcaggctcagataacccacccgaggggggcaaaccagag
gacaaaccagctgaggagaggccctccaacacctcagccccagcatcaactccaaccagt
tcgtctgatctcttggccaatgtgaacatgttcgaggaggcaacttctgctctagtgaca
ggccaatcatatgagaacatggtgaccgagatgatgctgatgggctatgagagggagcag
gtggtggcatcactccgagccagcttcaacaacccagacagagctgtggagtacctgctt
acagggatcccagctggggaggagggccatgtgagtgctgacccagtggtgccccctgtg
ggtggaggaactccagctctgaacactggcagtatgaccaccccagccagcacaggctcc
ctagccagcgctgcaacaggagccaaccctctggggttcctggttaaccagccccagttt
ctccagatgagacagatcatccagcaaaacccctctctgctccctgccttactacagcag
atagggagggagaacccccagcttctgcaacaaatcagcagccaccaagagcagttcatc
cagatgctgaacgagccagcccaggaggggggtcagggaggaggaggagtaggtggtggt
ggtggtggaggaggtgttggagtgggggtcggtggggaggctggaagtggcatgaactat
attcaggtcacaccccaggagaaggaggccattgagaggctaaaagccctaggattccct
gaaggacttgttatacaggcctactttgcctgtgagaagaatgagaacttggccgctaac
ttcctcttacagcagaattttgacgatgactaa
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