KEGG   Oncorhynchus mykiss (rainbow trout): 110523980
Entry
110523980         CDS       T07259                                 
Name
(RefSeq) AF4/FMR2 family member 1 isoform X1
  KO
K15184  AF4/FMR2 family member 1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:omy03021]
    110523980
Transcription machinery [BR:omy03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     110523980
SSDB
Motif
Pfam: AFF4_CHD AF-4 AF4_int
Other DBs
NCBI-GeneID: 110523980
NCBI-ProteinID: XP_036833628
LinkDB
Position
5:48149869..48221895
AA seq 1184 aa
MMGTHDDIPLDSTTPRLTSHNEERNLLRIREWERRNQEALQEKEFYQENVPLFGEPYKTN
KGDELSSRIQRMLGSYENVKISNSHLCLDSSFSNDPPSHVTTTYRRPSHSRDRVKPAFQN
TPLYGAGQNGSGGPSISRQTSQPLKRLPVPSSHTQSSLGLSQALASPDPLQGKAEPCPWP
DLREYASLSPVLSTLSPPAEPLSPLHSSDPSDSEPQDTPDRHQGSPLHTERHPASLLHPD
SPVPMEGSPLDDPQRDIPLLAIEGATTLPSQTFPLPLASKPNLVMPQKPTAYVRPMDGQD
QVTSESPDLKPSPEGFHGQSYHHEPLPDLKITKPSLSKLKIPSQSIETLSNKAHCVEDIL
REMTHSWPPLLTAIHTPSTAEPSKFSFPVKEAQHVPPAFPGQKHYGSPPLASSSRLICQQ
SSSSFSTVVATHSSGVESASSSDSESSSGSDSDSESSESGTEEAPQPIRSSSPPVPKAEG
PVVTNWQLNNWIRVSQQNPITESQSDTVQSPLPKQQQSHDSEEEAIPPRDYKSHTPPQYP
EFSDSEAKPPGSEDVACKQHVRHKSPAVSHVGDSSSQRKTVGNKHPSRPVKAPRPEDSQA
GLRVESVEVAPRDKDPSFTDRPKVKTKTGHSSKSGSAITDSKKPAKRNSLEKRKTKQPES
GSSGPKMTLMLDCKRERSRSPSPARVVETSVSVRKETLPAPHKGQKTPRSYSAAAAHQAK
RESSAKASRAPQGPPRALLVKIELNLLSRVPPQGSRPSHGGQEPTSRKRPNTARERGDGD
PASPITTKVCKKRPAEKDAKSLPRKKPKLEKDPKHSSSCPGSCKSATPKNPGEEEVERMR
SKKGASVPLQDPGKEPGRRKRLAGETPEPNAASAAKSKDREASTPVKHKKGTGKRHTEHS
KTGKAPKSSFAFSVPAQLTGGSLSSRPLLKVEDRQHPVEYHMKEAKKLKHKADATSDKVG
KAFNYLDAAMSFVESGIAMETDPQTPKSAYTMFAETLDLIRFILKLKGSVDPSAPVTDKD
FTILCMRCQSLLQMAMFRYKRETALKYSRTLTDHFKSSSKSAAPSQCVSKSTGTPSPMSP
MPSPASSGPGSNHSSGVGMGNVSTVAIPQVIQQVASSYVNITALFLSAHDIWEQADELAH
RGSGLLSELDSALGQLSLTSTMSSLVRHTRQGLQWLRLDTCETQ
NT seq 3555 nt   +upstreamnt  +downstreamnt
atgatgggcacacatgatgacatccccctggacagtactacgcctagattgactagccac
aatgaagagcggaatctccttcgcatccgagagtgggagaggcggaaccaggaagccctc
caggagaaggagttctaccaggagaacgttcccctttttggggaaccctacaagacaaac
aaaggagatgagctttccagccgtatacagagaatgctgggtagttatgaaaatgtgaaa
atctccaactctcatctgtgtttggacagtagcttctctaatgaccccccatctcacgtc
accacaacatataggcggccatctcacagccgagacagagtgaagcctgcattccagaac
actcctctgtacggggcaggccagaatggtagtggtggtccctccattagcaggcaaact
tctcagcctctgaagaggctccctgttccctcctcccacacccagtcctcactgggtctc
agtcaagccctggccagccctgatcccctccaggggaaagctgaaccctgcccctggcca
gacctgagggagtatgccagtcttagtccggtcctctccaccctgtcccccccagctgag
cccctatcccccctacattccagtgaccccagtgactctgagccccaggacacccctgac
aggcaccaaggatcccccctgcacaccgagaggcacccggcctccctcctgcaccccgac
tcccctgtcccaatggaggggtcccctctggatgacccccagagagacatcccacttctg
gccatcgagggagcaacaaccctgccctctcagacattccctctaccactggcctctaaa
ccaaatctggtcatgccccagaagcccacagcctacgtccggcccatggacggccaggac
caggtgaccagcgagtctccggacctcaagccctctcctgaaggcttccatggacagtct
tatcatcatgaacccttaccagacttgaaaatcaccaagcccagcctttccaaactgaag
attccatcacagtctatagagactctgtcaaataaagctcactgtgtggaggacattctg
agggaaatgacccactcctggcctcctcttctgactgccatccacacacccagcacagct
gagccctccaagttctccttcccagtcaaggaagcacagcatgtcccacctgcatttcca
ggacaaaaacactatggatcacctccgctagcctcttcctccagactcatctgtcaacag
agctcatcgtccttcagtacggttgtagcaacacattccagtggggtggagtcagccagc
tccagtgactccgagagcagctcagggtcagactcagacagtgagagcagtgagagtggg
acagaggaggccccacaacccatcaggagcagcagcccaccagtacccaaggctgaaggc
cccgtggtgactaactggcagctgaataactggatcagagtgagccagcagaaccccatc
acagagagccagagtgacactgtccaaagccctttaccgaaacagcagcagagccatgac
tcagaggaggaggccattcctcccagggactacaaatcccacacaccaccacaataccca
gagttcagcgatagtgaagccaaacctccaggaagtgaggacgttgcctgcaaacagcat
gtccgccacaagtccccggccgtctcacatgttggggacagcagcagccagagaaaaact
gtggggaacaaacatccctccagaccagttaaggctccccgtcctgaggactcccaggct
gggctgcgggtggagagtgtggaggtagccccccgcgacaaagacccctcgttcacagac
aggccaaaggtcaaaacgaaaaccgggcacagcagcaagagtggcagcgccataacggac
agtaagaagcctgccaagcgcaactctttggagaagaggaagactaaacaaccagagtct
ggaagcagtggtcccaagatgactctgatgctggactgtaagagggagaggtctcgcagt
cccagccctgcccgggtggtggaaacctccgtcagtgtcaggaaagagaccctcccggcc
cctcataaaggccagaaaacgcccaggagctactctgcagctgcagcacaccaggccaaa
cgggagtcctcagccaaagcttccagggccccccagggacctccacgtgccctgctggtg
aagattgagctcaatctgctgtccagggtccctccccagggctccaggccttctcatgga
ggccaggaaccaaccagcaggaagaggcccaacacagcccgagagaggggagacggggac
cctgcttcccccatcactaccaaagtctgcaaaaagagaccggctgagaaggatgcaaaa
tccctgccaaggaagaagccaaaactggagaaagatcccaaacactcctcttcatgtcct
ggttcctgcaagtctgcgacgcccaagaaccctggagaggaggaggtggagaggatgcgg
tcgaagaagggggcttctgtccctctgcaagaccctgggaaagagccggggaggcgcaag
cggcttgcaggggagaccccagagcccaacgctgcctcagcagccaaaagcaaggacagg
gaggcctccacccccgtcaaacacaagaagggcactgggaaacgacacacagagcattcc
aagactggcaaggcccccaagagcagctttgccttctctgtgcctgcccagctcaccggg
ggttccctgtcctccagacctctgctcaaggtcgaggacaggcagcacccagtggagtat
catatgaaggaagccaaaaaactcaagcacaaagcagatgccacgtctgataaggttggc
aaagctttcaactacctcgatgctgccatgtcctttgtggagagcggcatcgctatggaa
accgatccccagaccccgaagtcggcatatacgatgttcgctgaaaccttggatctgata
aggttcatactgaaactgaagggttctgtggacccctctgcccctgttacagacaaggat
tttacaatattatgtatgaggtgccagtcccttctacagatggccatgtttcgctacaaa
agagaaacggcacttaagtattcaaggaccctcacggatcatttcaagagctcctccaag
tctgcagccccctcccaatgtgtctcaaaaagcacgggcacaccatcccccatgtctccc
atgccgtctcctgccagctctgggccaggctccaatcacagcagtggggtggggatgggc
aatgtgagcactgtggccattccccaggtcatccagcaggtggcatcgtcctacgtcaac
atcacagcactcttcctgagtgctcacgacatctgggagcaggctgacgagctggcacac
agaggcagtggtttgttgtctgagctggactcagctctgggccagttgagcctgacctcc
accatgagctctctggtgcgtcacacacggcagggactgcagtggctccgactggacacc
tgcgagacacagtga

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