Oncorhynchus mykiss (rainbow trout): 110524005
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Entry
110524005 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13 isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110524005
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110524005
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110524005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
Prok-RING_4
zf-RING_16
zf_RING_Vps8_fungal
RINGv
PHDvar_NSD
zf-RING-like
zf-RING_4
PHD
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
110524005
NCBI-ProteinID:
XP_021458944
Ensembl:
ENSOMYG00000002161
LinkDB
All DBs
Position
5:complement(51296717..51382751)
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AA seq
378 aa
AA seq
DB search
MLFSLGMLMLSATQIYTIFTVQLFAFLNLLPVEADISAYTFDNKTGNFDDLPARFGYRLP
SDGLKGFLIGARPQNACEPIDPPPIRDNLTGAFIVLIKRFDCNFDIKVVNAQKAGYKAAI
VHNVDSDDLISMGSNDLDILKQIDIPSVFVSEETADSLKKDYAYDKGGHVVLMPDFSLPL
EYYLIPFLIIVGICLILIIVFMITKFVQGRHRARRSRLRKDQLKKLPIHKYNKGDAYDVC
AICLDEYEEGDKLRVLPCSHAYHNKCVDPWLTKTRKTCPVCKQKVVPSAGDSDSDSEEGD
SGPDENEVSESTPLLRSLASTSGHSFGTMLGASRSEPDQESSEYEDDHLDTSDDSKVTVE
TVVQLQEPRPDDHDPVRA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgctgttctccctggggatgctgatgctgtccgccacacagatctacaccatctttacc
gtgcagctctttgccttcctcaacctgctgcccgtcgaggccgacatctctgcctacaca
tttgacaacaaaacgggaaactttgatgacctgcctgcacggtttgggtaccggttgccc
agcgatggactcaagggctttctgattggtgcacggccccaaaatgcctgcgaacccatt
gacccgccccctattcgggacaacctcactggtgccttcatcgtgctcatcaagcgcttc
gactgcaactttgacatcaaggtcgttaacgcccagaaggccgggtacaaggcggcgatt
gttcacaacgtggactctgatgacttaatcagcatgggatccaatgatctggatattttg
aaacagattgacattccatcagtgtttgtgagcgaagagactgccgactccctgaaaaag
gactacgcatatgacaaggggggtcatgtggtcctcatgccggacttcagcctgcctctg
gaatactacctgatccccttcctcatcatcgtgggaatctgcctcatcctcatcatcgtt
ttcatgatcaccaagtttgtccagggcagacacagggctcggagaagccgtctgcgcaag
gaccagctgaagaaacttcccattcacaagtacaataaaggggacgcctacgatgtgtgt
gccatatgcctggatgagtatgaggagggagacaagctccgggtcctgccctgctctcac
gcttaccacaacaagtgtgtggacccctggctgaccaagaccaggaagacgtgtcctgtg
tgcaagcagaaggtggtcccctctgcgggcgactcagactccgattcggaggagggcgac
agcgggcccgatgagaacgaggtgtcagagagcaccccgctgctgcgctccctggcctcc
accagcggccactcttttggcaccatgttgggcgcctcacgttccgagcccgatcaggag
tcctccgagtatgaagacgaccacctggacaccagcgacgacagcaaggtcaccgtggag
acagtggtgcagctgcaggagcctcgtcctgacgaccacgacccggtccgtgcctga
DBGET
integrated database retrieval system
