Oncorhynchus mykiss (rainbow trout): 110524032
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Entry
110524032 CDS
T07259
Name
(RefSeq) nuclear speckle splicing regulatory protein 1 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110524032
Membrane trafficking [BR:
omy04131
]
Autophagy
Other autophagy associated proteins
Others
110524032
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
110524032
NCBI-ProteinID:
XP_036833723
LinkDB
All DBs
Position
5:53766770..53801558
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AA seq
711 aa
AA seq
DB search
MAEFPIDQNKLPGVKEVCRDFAVLEDHCLAHNLQEQEIESHLASNVHKSRLVQQDVALAK
QLQEEEDRRAQAKAKRQHRDIERSDNEIAQEIQEELVRQAEQQRKQEEKDAAIARKLQEK
EMKEERKRQKQLEANFEEEYYEDKGAIRAPLDLDDKPRRPGSNCHSPESHPLTPGSRRDL
SPEYVSFEPSRTRYPPYDSVEPSTSGCSRSPEHHLESRGGGSRGKHGDPYPEDHLSNSRG
KRGGSYPDYHHPTEGRSKGKGGQRGRDPQGSQSTFYPDSREPRRHREERGDEGERVVRRK
ERPARPPPQSHNPVERDEAWERKREWEKDRQREARRDEERERDAPRHEERSRGGQRHGLR
SQDQEHGRDKHREKDRRRERTKSRERGLDEDYYEPIPSSRAWTVGGVEGPGDEGGPMARL
HSGPSELCEEEEEARRSPRVMRGERRGHKDPEEGPSMGTERSYTHPAPREPGRIVQGGPG
GRGAVVVGGEYGMGEATQGIAQLDLREQEILDMEVARKLQEEEVKASKMDKRAAQVAQDE
EIARLLMEQEKKEYKKSREKEKQGMRPEERGMRLEERRRPEGGDFKPNSEEVVRPRSREE
EYQRHRNHQKPARTMRMWRPATATQRATTLPALQPDLRLLTKVPITGSDPGSLSYPSVTL
LFLFFFTHRCCICKNSHHFILTKSLGTMSPSRWRWDSPACPVGREFGKTCG
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtttcccatcgatcaaaacaaactgcctggagtaaaagaagtgtgtcgagac
tttgctgtgctggaggaccactgcctggcccataatctccaggagcaggaaatcgagagc
cacttggcatccaacgtccacaagagccgtctggtgcagcaggacgtagcgttggccaag
cagctgcaagaggaggaggaccggagggcccaggccaaggccaagagacaacaccgggac
atagagcgcagcgacaatgagattgcccaggagatacaggaggaattggttcgacaggcg
gagcagcagcgcaagcaggaggagaaggatgcggccatcgctcgtaagctgcaggagaag
gagatgaaggaggagaggaagcgacagaagcagctggaggccaactttgaggaggagtac
tacgaggataaaggagccatccgagcccctctggacctggatgacaaacctaggcgacct
ggttcgaactgccactcccccgagtcgcatccccttaccccaggctcacggcgcgacctc
tcccccgagtacgtttcttttgaacctagcaggaccagataccccccatacgactctgtg
gagcctagcaccagtggatgttccagatcccccgagcaccatttagagagtagaggaggg
ggtagtaggggcaagcatggagacccataccccgaggaccacctctccaatagcaggggg
aaacgtgggggcagttacccagactaccaccaccccaccgagggtagaagtaaagggaag
gggggccagaggggccgagacccccaggggtcccagtccaccttctacccagacagccgt
gagcccaggagacacagagaggagagaggggatgagggagagcgggtggtgaggaggaag
gagaggcccgcccggccgcccccgcagtcccacaaccctgtggagagagacgaggcctgg
gagagaaaaagagagtgggagaaagaccggcaaagagaagccaggagagacgaggagagg
gagagagacgcaccaagacacgaggagagatcgcgaggcggacagagacatgggctgcga
tcgcaagaccaagagcatggccgagacaaacacagagaaaaagacagacgccgagagaga
accaagagcagggagcgaggtcttgatgaagactattacgagcccatacccagcagccgg
gcctggactgttggtggggtggagggccctggggatgagggggggcccatggccaggctc
cactctggccccagtgagctgtgtgaggaggaggaggaggccagaaggagcccccgcgtg
atgaggggggagaggagaggtcacaaggaccctgaggaggggcccagcatgggcacggag
cgctcctacacgcaccccgctcccagggagccaggtcgtatcgtgcaagggggaccaggg
ggtcgcggcgcagtggtggtaggaggggagtacgggatgggcgaggccacccagggcatc
gcccaactggacctgagggagcaggagatcctggacatggaggtggcccggaaactacaa
gaggaagaggtcaaggcgagcaagatggacaagcgcgcagcccaagtggctcaggatgag
gagatagcccggctgctgatggagcaggagaagaaggagtacaagaagtccagggagaag
gagaagcaggggatgaggccggaagagagggggatgaggctggaagagaggaggcggcca
gagggaggagacttcaagcccaactcagaggaggtagtgcgtcccaggtcccgagaggag
gagtatcagaggcacaggaaccaccaaaagcctgccaggactatgagaatgtggagacca
gctacagctactcagagagccactactcttcccgcactccagccagacctgaggctgctt
acaaaggtacctattacaggcagtgacccaggctccctaagttatccatccgtgactttg
ttgttccttttcttttttactcatcgttgctgtatttgtaaaaactcccatcactttata
ttgaccaagagccttgggacaatgtcacctagtcgttggcggtgggattctccagcatgt
ccagttggccgggagttcgggaaaacgtgcggctga
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