Oncorhynchus mykiss (rainbow trout): 110524050
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Entry
110524050 CDS
T07259
Name
(RefSeq) zinc finger protein GLIS1 isoform X1
KO
K09232
zinc finger protein GLIS1/3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110524050
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
110524050
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
Zap1_zf1
FOXP-CC
zf-C2H2_8
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
110524050
NCBI-ProteinID:
XP_021459023
Ensembl:
ENSOMYG00000013310
UniProt:
A0A8C7PW61
LinkDB
All DBs
Position
5:complement(54378123..54543804)
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AA seq
1000 aa
AA seq
DB search
MQKSSALFGMVSHCQTPSFSDFTGLTLSMYSSKSDICARRIGNDGFGAQSHMQCPSPKRH
AAPEERYGSQEKGLLTAKSPRACFSLSPEQVNGSCSGAYCPEKESGPELGGSEGTLMRCG
QSLAVPVPPGSQPGPVGHYHSVHCERPTPTHNLHLQDSQQQHAEARSSAFQRSLASPDPG
CGTSNGARALPLSYPIKQEASMGYNISQGPGVPTTIQGAFQNSRGNIGVRRGEMEGPLGG
SGGGSGLGSALSADSAYPFNNEDGSSPLSLSPSGSRHSARLLTTSSLKRRCLSLASQSAA
ASSNASAVANAVVTATEGIDITAIICSSQMSVVACVNGLRTNPSPQPSGGFSSRAGPHKP
PPPQKCSSPQQPLSQESCQLPSPAACLLSLSSGSSSGSSSSSVSSLDPEQQNQGLCEEPG
SMQPVGGGGGGAGADGLGLLMSGALMTGGLLGNVSMLEGCQRAGGGALKQEPLDDFSPSE
EELFQHHYHHHHHYNHLTGRTAASHLRPHPHHPAPPRPSMPPPYHLHQYGGPSPGGLLHL
QNQPTSSSSSLLSGLKTSSPVGGEDGGPLSDKQVCRWIDCSVAYEQQEELVRHIEKVHID
QRKGEDFTCFWAGCIRRYKPFNARYKLLIHMRVHSGEKPNKCMFEGCSKAFSRLENLKIH
LRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRTHLDTKPYACQIPGCTKRYTDPSSLRKH
VKIHSAKEQQVRRKLRPCPHLEQDVLSECLSVHHPQGSVPSQHQHLHCPAPSQQHLFNGK
DGRSPGLCQDIFTGLYTGSSTPHHGVSVELLSPGPAPTPGSASAPDLPPRQPRLDRDLSS
PHHLSPLSTMESTRDGVSGPLLSPGMKGTGTPPPLEKQQQQQQHIHPHHKPYSHYHHQAA
SDDYQGSFQSCFHFGDSYRMEQSVSGVHLPADSHGYTSHQHNGFHMSSTSGGSAAGFSLA
QDLQGPGGCQFSSSPEESIFFQVNSFDRSLSQMSSVYTET
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaatcctcagcactcttcgggatggtcagtcactgccaaaccccatcgttttca
gacttcacgggactgactctctccatgtacagcagtaaatcggacatctgcgccagacgc
atcgggaacgacggttttggagcccagagtcatatgcaatgtccgagtccaaagcggcat
gccgcgccagaagagcgctatggatctcaagagaaaggccttctgacagccaaatctccc
cgcgcctgcttctctctctcccccgaacaagtgaacggcagttgcagcggtgcctactgc
ccagagaaggagagtgggccagagctggggggcagtgagggcacactgatgcgctgtggg
cagagtctggcggtgccggtgccaccagggagccagccaggtccagtgggtcattaccac
agtgtccactgtgagcggcccacacccacacacaaccttcatctgcaggacagccagcag
cagcacgctgaagccaggtcctctgccttccagagatccctggcctctcccgacccaggc
tgcggaacctccaacggggccagggcacttcctctctcctatcccatcaaacaggaggca
tccatgggctacaacatctcacagggaccaggggtccccaccacaatccagggtgccttc
cagaacagcaggggaaacattggggtccggcggggggagatggagggtcctctcggtgga
agcggcggtggcagtggcttaggcagtgctctatcggcagactcggcgtacccgtttaat
aatgaagatggctcctccccgctgtctttgtccccaagcggctcccgtcattcagcgcgg
ctgctcactactagcagcctgaagagacgctgcctgtccctggcttcccagtccgccgct
gccagcagcaacgctagcgccgtcgcgaacgccgtcgtcaccgccaccgaggggatcgat
atcaccgccattatctgctcctcccagatgtccgtggtggcctgtgtcaacgggctccgg
acaaacccctcaccccagcccagcggcggcttctcctcccgggctggcccccacaagccc
ccacccccccagaagtgcagcagcccccagcagcccctctcgcaggagagttgtcagctg
ccctcgcctgccgcctgcctgctgtccctctcctcgggctcctcctcgggctcctcctcc
tcctccgtgtcttctctggacccggagcagcagaaccagggactgtgtgaggagcccggc
tcaatgcagccggtgggtggaggaggaggaggagcaggcgccgatgggctgggtctgctg
atgagtggggccctgatgacgggaggcctgcttgggaacgtgtctatgctggagggctgt
cagagggccggtggaggagctctgaaacaggagcctctagatgacttctctcccagcgag
gaggagctctttcagcaccactaccaccatcaccaccattataatcacctgactggccgc
actgctgccagccacctccgtcctcacccccaccaccctgcccccccgcggccctccatg
cccccaccctaccacctgcaccagtacgggggcccaagcccagggggcttgctgcacctc
cagaaccagcccacatcatcttcatcgtcactcctctcgggcctcaagacctcgagcccc
gtcgggggagaggacggtgggccgctcagcgacaagcaggtttgccgctggattgactgc
agtgtggcgtacgagcaacaggaggagctagtgaggcacatcgagaaggtgcacatcgac
cagcgcaaaggggaggacttcacctgcttctgggccggctgcatccgccgctacaagccc
ttcaacgcccgctacaaactcctcatccacatgagggtccactcgggagagaagcccaac
aagtgtatgtttgagggctgcagcaaggccttttcccgcctggagaacctaaagatccac
ctacggagccacacaggggagaagccctacctgtgccagcaccccggctgccagaaagct
ttcagcaactccagcgaccgggccaagcaccagcgcactcacctggacacgaaaccgtac
gcgtgtcagatcccgggatgcaccaagcgctacaccgatcccagctccctacgcaaacac
gtcaagatccactcggccaaagagcaacaggtgcgtagaaagctgaggccctgcccccac
ctggagcaggacgtcctgagtgagtgtctgtctgtgcaccacccgcagggctccgtcccc
tctcagcaccagcacctgcactgccccgccccctcgcagcagcatttgttcaacgggaag
gatggccgctccccgggactgtgccaggacatcttcacaggcctgtacactggctccagc
actccccaccacggtgtctcagtggagctcctctccccaggaccagcccccacccctggc
tcagcctccgcccctgacctgccccctaggcagccccgtctggaccgggacctgagcagc
ccgcatcatctgtcccctctgtccaccatggagagcacacgtgacggggtgtcgggtcct
ctcctctccccagggatgaagggtacaggcactcctcctcccttggagaagcagcagcag
cagcaacagcacatccacccccaccacaagccctactctcattaccaccaccaggctgcc
agtgacgattaccaaggcagctttcagagctgcttccattttggagactcctacagaatg
gagcagtctgtgagtggtgttcacttaccagcggactcacatggctacacttcccaccaa
cacaatggcttccacatgtccagcaccagcggtggctctgcggcaggcttcagcttggcc
caggacctccaggggccaggggggtgccagttctcctccagcccagaggagagcatcttc
ttccaggtgaacagcttcgaccgcagcctgagccagatgtcctctgtctacacagagaca
tag
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