Oncorhynchus mykiss (rainbow trout): 110524080
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Entry
110524080 CDS
T07259
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510
Focal adhesion
omy04512
ECM-receptor interaction
omy04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110524080 (lamb4)
04518 Integrin signaling
110524080 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110524080 (lamb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
LAMB4
Laminin_I
DUF3375
Motif
Other DBs
NCBI-GeneID:
110524080
NCBI-ProteinID:
XP_021459076
Ensembl:
ENSOMYG00000004239
LinkDB
All DBs
Position
1:47316298..47339999
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AA seq
1789 aa
AA seq
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MVSLFLLVLLVPGALLQEDCDVNSCHPQLGDLMVGRAAQLSASSTCGRNGPQNYCILGYL
EDEQKCFKCDSRQPYNLYNNQNSHQIENVITTFGPERKMKWWQSENGVHQVSIRLDLETL
FQFSHLVLTFKSFRPAAMLVERSKDYGYSWKVFRYFAEDCASHFPGVSQGPADSTDDVVC
DSRYSASEPSTDGEVVLKALDPSFDIENPYAPHIQEQITLTNLRVNFTHLFTLGDTLLGR
KKRNPQEKYYYALYEMVVRGSCFCNGHASMCMPVDGTRGDVLNEPGVIHGRCVCQHNTVG
TNCERCQDFYNDVPWRPAGQSDPHVCRRCNCHGHSETCHFDIDQYQASGGVSGGVCDGCR
HDRMGPQCERCRPYLYQDPQLSMEDPRGCISCDCDLTGSLDNGLCDPVSGRCVCKENVAG
DRCDRCKFGFYGFSQEDPTGCQRCRCNFLGSVLTPYPCDQVTGQCVCQRFAMGPLCDQCL
PGYWGLGNTVHTCSPCDCDHGGAYSSTCSSLDGQCQCLPNMVGRSCGDPAPGHFLAALDY
YLYEAENAAPLEGKSSSPLLKPTDLPVCEEYYRQQGYDIKYQNGRLVLTRRSKRQARRRR
QGQRSIPLDPGSALQIVPRERTPDVPITWTGPGFVRVLDGAGLRFTVDNLPASLDYHLVI
RYEPESPDDWMASVSIVSLLAGDGGCPTSPKGEKTLTIPGAARVAILDTPVCLNAGRRYY
VDITFRKQPNSNPQSSSHTLVDSMGLIPKMESVQDFCSQSELDSFRRFRCFELAAEQETL
PDVCYGLIGSLSARIHNGAMLCRCNIQGSHGPYCSKFGGLCECKANVVGRCCDSCAPLNF
GFGPNGCAPCECDPRGAVAELCDQVRGQCPCRMEVGGRRCDRCLSGYYGFPLCRPCKCNG
LAELCDQDTGACLDCKEHSTGYNCESCVEGYFGDPVSREPCKPCLCPDTQSSGRFFASTC
NKDPESGSLTCDCLAGHTGLRCDACSAGFYGDLTAPGGGGCDECLCNNNIDPADSDACDS
VTGECLRCLHNTQGPRCQSCKPGYYGDALAQDCKECSCDRQGTDVTQCPLGSPCFCDPLT
GQCPCRAGAVGTLCDECATGFWNIQGESGCQPCKCDPANSFNNHCDKVTGHCQCRTEFGG
RQCNECGENHFGNPDLQCVSCDCNMEGTDRPACNPLTGECLCRVGVMGIFCDECAPGYDQ
VFPACLPCHPCAVLWADNVTDVHRAAQRMRTFIPPPREQLEPGHSRQLQRMLEMHSKLDY
LGNLTGRSLPRVKDVEKLCVIISKLKDSIDPNAIIVDSSSLLNTEIDNIHHEFKMLLDNL
RNKIGEAPKLDLKEMQEALEKIRKQHADFMADEKKVKEAERALENSMDTRQEIKDHLSSC
SILGDMEGLEKKVKALSVAKLNKNICGGPGDEECSKSECGGALCRDFLGQRECGGPTCKG
SFPVSHNATKTAEQVENDLIDLLQKLKDSKIKINEAKQVTQGTHEQAEELQKKITDSKEK
YKREKNDTKDLINRVKDYLTDEMVAPEDIENLVKVVLAIQLPGSPDDIRSMIQNIRGVLT
NFIEFKEDLKKLKDQAKTAQDLLEKAQAIRDRTRAIDVTDLKKTITDTENTQDRVAQDLE
KAKESHGVADKMIKEIEKKLNNIETNLNSTRTPEMLEEIEVLKSKTEMNREQAEQAKADA
DAAIGATTDAEKGLDKVTALFDRLKTGNTNQTNNEAANERLKNITVEAEKVAKDIRDKIQ
QIDDLEKKIQDFIRNKEDKAKEVAMLLEMVEALQKEITARVDGYINCTS
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atggtttctctgttcctgctcgtgttgctggtacccggggccctcctccaggaagactgt
gatgtcaactcttgccacccccagctgggggacctgatggtgggccgtgctgcccagctc
tccgcctcctccacctgtggacggaacgggccccagaactactgcatcctcggatacctg
gaggatgagcagaagtgtttcaaatgtgactccaggcagccctacaacctctacaacaac
caaaacagccaccagattgagaacgtcatcaccacctttggccctgagcgcaagatgaag
tggtggcagtctgagaacggggttcatcaagtcagtatccggctggatctggagactctg
ttccagttcagccatcttgtcctcactttcaagagtttccgtcctgccgccatgctggtg
gagaggtccaaagactacggatacagttggaaggtgttccgttactttgccgaggactgt
gcctcccacttccccggggtctcacaggggccggctgacagcaccgatgacgtcgtctgt
gacagcagatactctgcctcagagccatctactgacggagaggtggtgttgaaggctcta
gatccaagctttgacatagagaacccatatgctccccatattcaagagcagatcaccttg
accaacctgcgggtcaacttcacccatctgttcaccctgggtgacaccctactggggcgg
aagaagaggaaccctcaggagaagtactactatgccctgtacgaaatggtggtgcgcggc
agctgcttctgtaatggccatgccagcatgtgtatgcccgtggatggcacccggggtgac
gtcttaaatgagcctggcgtgattcacgggcgctgtgtatgccaacacaacactgtgggc
acaaactgtgagagatgccaggacttttacaacgatgtcccctggaggccggccggccaa
tctgacccacatgtctgcagaaggtgtaactgtcacggtcattcggagacgtgtcacttc
gacatagaccagtaccaggccagtgggggggtcagcgggggggtgtgtgacggctgccga
catgaccgcatgggtccccagtgtgaacgctgccgaccctatctctatcaggacccccag
ctctccatggaagaccctcggggctgtatctcatgtgactgtgacctgacgggatccctg
gataacggcctgtgtgaccccgtgtcgggccgctgcgtgtgtaaggagaacgtggcgggg
gacaggtgtgatcgctgtaaatttggcttttacgggttcagccaggaggaccccactggc
tgccagaggtgcaggtgtaacttcctgggtagtgttctgactccctacccatgtgaccag
gtgacaggccagtgtgtatgtcaacgcttcgccatgggacccctgtgtgaccaatgtctg
ccaggttactggggtctggggaacactgtacacacctgctcaccttgtgactgtgaccat
ggaggagcctacagcagcacgtgctcttcattggacggacagtgtcagtgcctgccaaac
atggtgggccggagctgtggtgatcctgccccgggacatttcctggctgctctagactac
tacctgtatgaggcagagaacgctgccccactggagggaaaaagctcctcccctctgttg
aaacccacagacctgcctgtgtgtgaggaatactacagacagcagggctatgacatcaaa
tatcaaaatggccgcttggtcctgaccaggagaagcaaaagacaagccaggaggagaaga
cagggacagaggtccattcccctggacccaggctcagccctccagattgtgccccgggag
aggacaccagatgtaccaatcacttggaccggcccaggattcgtgcgggtcctggatggt
gctgggcttaggttcactgtggacaacctcccagcgtccctcgactaccatctagtcatc
cgctatgaaccagagtcgccagatgactggatggcctctgtgagcattgtttcattattg
gctggtgacggaggttgtcccactagcccgaaaggggagaaaaccctcaccatacctggg
gctgccagggttgccattttggatacgcctgtgtgtctgaacgcgggaagaagatattat
gtggacatcacttttaggaagcagcccaattctaaccctcagtccagctcacataccctt
gtcgactcaatgggtctgatccctaagatggagtctgtgcaggacttctgttcgcagagt
gagctggactcgttcagaagattccgctgttttgagttggctgctgagcaggagaccctg
cctgatgtgtgttatggcctcattggaagcctgtcggctcgcatacacaacggtgccatg
ctttgcaggtgcaacattcagggttctcatggcccctactgcagtaaattcggagggctc
tgtgagtgcaaggccaacgtggttggccgctgctgtgactcctgcgcccccctgaacttc
ggcttcggacccaacggctgtgcaccctgtgagtgtgaccctcgcggtgcagtggcggag
ctgtgtgaccaggtcagaggtcagtgtccgtgtcgtatggaggtgggcgggcgacgctgt
gatcgttgcctgtctgggtactacggcttcccactgtgtcggccctgtaagtgtaacggc
ctggctgaactgtgtgaccaggacactggagcctgcctggactgcaaggagcactccacc
ggatacaattgtgagagctgtgtggagggttactttggtgacccagtctccagggagccc
tgtaagccttgtctgtgtcctgacactcagtccagtggacggttctttgccagcacctgc
aacaaggacccagagtctggtagcctgacttgtgactgcctggctggacacacaggtctc
cgctgcgatgcctgctccgctggtttctacggcgacctgaccgcgccgggcggcggaggc
tgcgacgagtgtctatgtaacaacaacatcgaccctgctgacagtgacgcgtgtgacagt
gtgacgggcgagtgtttgcgttgcctccacaacacccagggaccccgctgtcagagctgt
aagcctggctactatggagacgcactggcccaggactgcaaagagtgctcctgtgaccgg
cagggaacggatgtgacccagtgccctctgggcagcccgtgtttctgtgacccgctgacg
ggtcagtgcccgtgtcgggcgggcgcggtgggcacgctgtgtgacgagtgtgccaccggc
ttctggaacattcagggagagtccgggtgccaaccgtgtaaatgtgaccctgctaactcc
ttcaataaccactgtgacaaggtgactggtcattgccagtgtcgtactgagtttggagga
agacagtgtaatgagtgtggggaaaatcactttgggaaccctgacctgcagtgtgtttcc
tgcgattgtaacatggagggtaccgaccgccccgcctgcaacccattgacgggtgagtgt
ctgtgccgcgttggtgtgatgggcatcttctgtgatgagtgtgcccctgggtatgaccaa
gtcttccccgcctgcctcccgtgccacccctgtgccgtcctgtgggcggacaacgtcacc
gacgtccaccgtgccgcccagaggatgcgcaccttcatccctcccccccgcgaacagctg
gagcctggacacagtcgtcagttgcaacgaatgctggagatgcactccaagctggactat
ctggggaacctgacagggagatccctacctcgggtgaaagacgtggagaagctgtgtgtc
ataatctcgaaactcaaagactccatagaccccaacgccatcatcgtggactcatcatct
cttctgaacactgagatcgacaacatccaccacgagttcaagatgctgttggataactta
aggaacaaaatcggcgaggctccaaaactagatctaaaagaaatgcaggaggccctggag
aagatccggaagcagcatgcagacttcatggctgatgagaagaaggtgaaggaggccgag
agggccctggagaactccatggacacacggcaggaaatcaaagaccatctgtccagctgc
agcatcttgggagacatggaggggctggagaagaaggtcaaggctctgagtgtggccaaa
ctcaacaaaaacatctgtggaggcccaggcgatgaggaatgctccaaatcagagtgtggg
ggtgcgctgtgtcgagacttcctgggacagagagaatgtgggggtcctacgtgcaagggc
agcttccctgtgagccacaatgccacaaaaacagctgagcaagtagagaatgaccttatc
gacctgctccaaaaactaaaggactccaagatcaagatcaatgaggccaaacaggtgacc
caaggcactcatgagcaggcagaggagctacagaagaagatcactgacagcaaggagaag
tataagagggagaagaatgacaccaaggacctcatcaatagggtcaaagactacctcaca
gatgagatggtggcgccagaggacatagagaatttggtcaaggttgttctggccatccag
ctgccgggctctccggacgacatccgctccatgatccagaacatccggggcgtgctgacc
aacttcattgagttcaaggaggatctgaaaaaactgaaggaccaagccaagacagcccag
gacctgctggagaaagctcaggctatcagggacagaaccagggctattgatgttacggat
ctcaagaaaaccatcacggacactgagaatacacaggacagggtcgcgcaagacctggag
aaggctaaggaaagccatggcgtggcggacaagatgattaaagagattgagaagaaactg
aacaacatagagactaacttgaactctactagaactccagagatgctggaggagattgag
gttctgaagagcaagaccgagatgaacagagagcaggcggagcaggccaaagctgatgca
gatgcagccataggtgccactactgacgcagagaaggggcttgacaaggtgactgcgctg
tttgataggctaaagacgggaaacacaaaccagaccaataatgaagcggccaacgaacgc
ctgaagaacattactgtggaggcagagaaagttgcaaaagacatccgagataaaattcaa
caaattgacgacttggagaaaaagatccaagacttcatcagaaacaaagaggacaaggcc
aaggaggttgccatgttgctggagatggtagaagccctccaaaaggagattactgcgcgt
gtggatggttacattaactgtacctcctaa
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