KEGG   Oncorhynchus mykiss (rainbow trout): 110524080
Entry
110524080         CDS       T07259                                 
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
  KO
K06245  laminin, beta 4
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510  Focal adhesion
omy04512  ECM-receptor interaction
omy04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110524080 (lamb4)
   04518 Integrin signaling
    110524080 (lamb4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110524080 (lamb4)
SSDB
Motif
Pfam: EGF_laminin Laminin_N LAMININ_IV_B EGF_LMN_ATRN LAMB1 LAMB4 Laminin_I DUF3375
Other DBs
NCBI-GeneID: 110524080
NCBI-ProteinID: XP_021459076
Ensembl: ENSOMYG00000004239
LinkDB
Position
1:47316298..47339999
AA seq 1789 aa
MVSLFLLVLLVPGALLQEDCDVNSCHPQLGDLMVGRAAQLSASSTCGRNGPQNYCILGYL
EDEQKCFKCDSRQPYNLYNNQNSHQIENVITTFGPERKMKWWQSENGVHQVSIRLDLETL
FQFSHLVLTFKSFRPAAMLVERSKDYGYSWKVFRYFAEDCASHFPGVSQGPADSTDDVVC
DSRYSASEPSTDGEVVLKALDPSFDIENPYAPHIQEQITLTNLRVNFTHLFTLGDTLLGR
KKRNPQEKYYYALYEMVVRGSCFCNGHASMCMPVDGTRGDVLNEPGVIHGRCVCQHNTVG
TNCERCQDFYNDVPWRPAGQSDPHVCRRCNCHGHSETCHFDIDQYQASGGVSGGVCDGCR
HDRMGPQCERCRPYLYQDPQLSMEDPRGCISCDCDLTGSLDNGLCDPVSGRCVCKENVAG
DRCDRCKFGFYGFSQEDPTGCQRCRCNFLGSVLTPYPCDQVTGQCVCQRFAMGPLCDQCL
PGYWGLGNTVHTCSPCDCDHGGAYSSTCSSLDGQCQCLPNMVGRSCGDPAPGHFLAALDY
YLYEAENAAPLEGKSSSPLLKPTDLPVCEEYYRQQGYDIKYQNGRLVLTRRSKRQARRRR
QGQRSIPLDPGSALQIVPRERTPDVPITWTGPGFVRVLDGAGLRFTVDNLPASLDYHLVI
RYEPESPDDWMASVSIVSLLAGDGGCPTSPKGEKTLTIPGAARVAILDTPVCLNAGRRYY
VDITFRKQPNSNPQSSSHTLVDSMGLIPKMESVQDFCSQSELDSFRRFRCFELAAEQETL
PDVCYGLIGSLSARIHNGAMLCRCNIQGSHGPYCSKFGGLCECKANVVGRCCDSCAPLNF
GFGPNGCAPCECDPRGAVAELCDQVRGQCPCRMEVGGRRCDRCLSGYYGFPLCRPCKCNG
LAELCDQDTGACLDCKEHSTGYNCESCVEGYFGDPVSREPCKPCLCPDTQSSGRFFASTC
NKDPESGSLTCDCLAGHTGLRCDACSAGFYGDLTAPGGGGCDECLCNNNIDPADSDACDS
VTGECLRCLHNTQGPRCQSCKPGYYGDALAQDCKECSCDRQGTDVTQCPLGSPCFCDPLT
GQCPCRAGAVGTLCDECATGFWNIQGESGCQPCKCDPANSFNNHCDKVTGHCQCRTEFGG
RQCNECGENHFGNPDLQCVSCDCNMEGTDRPACNPLTGECLCRVGVMGIFCDECAPGYDQ
VFPACLPCHPCAVLWADNVTDVHRAAQRMRTFIPPPREQLEPGHSRQLQRMLEMHSKLDY
LGNLTGRSLPRVKDVEKLCVIISKLKDSIDPNAIIVDSSSLLNTEIDNIHHEFKMLLDNL
RNKIGEAPKLDLKEMQEALEKIRKQHADFMADEKKVKEAERALENSMDTRQEIKDHLSSC
SILGDMEGLEKKVKALSVAKLNKNICGGPGDEECSKSECGGALCRDFLGQRECGGPTCKG
SFPVSHNATKTAEQVENDLIDLLQKLKDSKIKINEAKQVTQGTHEQAEELQKKITDSKEK
YKREKNDTKDLINRVKDYLTDEMVAPEDIENLVKVVLAIQLPGSPDDIRSMIQNIRGVLT
NFIEFKEDLKKLKDQAKTAQDLLEKAQAIRDRTRAIDVTDLKKTITDTENTQDRVAQDLE
KAKESHGVADKMIKEIEKKLNNIETNLNSTRTPEMLEEIEVLKSKTEMNREQAEQAKADA
DAAIGATTDAEKGLDKVTALFDRLKTGNTNQTNNEAANERLKNITVEAEKVAKDIRDKIQ
QIDDLEKKIQDFIRNKEDKAKEVAMLLEMVEALQKEITARVDGYINCTS
NT seq 5370 nt   +upstreamnt  +downstreamnt
atggtttctctgttcctgctcgtgttgctggtacccggggccctcctccaggaagactgt
gatgtcaactcttgccacccccagctgggggacctgatggtgggccgtgctgcccagctc
tccgcctcctccacctgtggacggaacgggccccagaactactgcatcctcggatacctg
gaggatgagcagaagtgtttcaaatgtgactccaggcagccctacaacctctacaacaac
caaaacagccaccagattgagaacgtcatcaccacctttggccctgagcgcaagatgaag
tggtggcagtctgagaacggggttcatcaagtcagtatccggctggatctggagactctg
ttccagttcagccatcttgtcctcactttcaagagtttccgtcctgccgccatgctggtg
gagaggtccaaagactacggatacagttggaaggtgttccgttactttgccgaggactgt
gcctcccacttccccggggtctcacaggggccggctgacagcaccgatgacgtcgtctgt
gacagcagatactctgcctcagagccatctactgacggagaggtggtgttgaaggctcta
gatccaagctttgacatagagaacccatatgctccccatattcaagagcagatcaccttg
accaacctgcgggtcaacttcacccatctgttcaccctgggtgacaccctactggggcgg
aagaagaggaaccctcaggagaagtactactatgccctgtacgaaatggtggtgcgcggc
agctgcttctgtaatggccatgccagcatgtgtatgcccgtggatggcacccggggtgac
gtcttaaatgagcctggcgtgattcacgggcgctgtgtatgccaacacaacactgtgggc
acaaactgtgagagatgccaggacttttacaacgatgtcccctggaggccggccggccaa
tctgacccacatgtctgcagaaggtgtaactgtcacggtcattcggagacgtgtcacttc
gacatagaccagtaccaggccagtgggggggtcagcgggggggtgtgtgacggctgccga
catgaccgcatgggtccccagtgtgaacgctgccgaccctatctctatcaggacccccag
ctctccatggaagaccctcggggctgtatctcatgtgactgtgacctgacgggatccctg
gataacggcctgtgtgaccccgtgtcgggccgctgcgtgtgtaaggagaacgtggcgggg
gacaggtgtgatcgctgtaaatttggcttttacgggttcagccaggaggaccccactggc
tgccagaggtgcaggtgtaacttcctgggtagtgttctgactccctacccatgtgaccag
gtgacaggccagtgtgtatgtcaacgcttcgccatgggacccctgtgtgaccaatgtctg
ccaggttactggggtctggggaacactgtacacacctgctcaccttgtgactgtgaccat
ggaggagcctacagcagcacgtgctcttcattggacggacagtgtcagtgcctgccaaac
atggtgggccggagctgtggtgatcctgccccgggacatttcctggctgctctagactac
tacctgtatgaggcagagaacgctgccccactggagggaaaaagctcctcccctctgttg
aaacccacagacctgcctgtgtgtgaggaatactacagacagcagggctatgacatcaaa
tatcaaaatggccgcttggtcctgaccaggagaagcaaaagacaagccaggaggagaaga
cagggacagaggtccattcccctggacccaggctcagccctccagattgtgccccgggag
aggacaccagatgtaccaatcacttggaccggcccaggattcgtgcgggtcctggatggt
gctgggcttaggttcactgtggacaacctcccagcgtccctcgactaccatctagtcatc
cgctatgaaccagagtcgccagatgactggatggcctctgtgagcattgtttcattattg
gctggtgacggaggttgtcccactagcccgaaaggggagaaaaccctcaccatacctggg
gctgccagggttgccattttggatacgcctgtgtgtctgaacgcgggaagaagatattat
gtggacatcacttttaggaagcagcccaattctaaccctcagtccagctcacataccctt
gtcgactcaatgggtctgatccctaagatggagtctgtgcaggacttctgttcgcagagt
gagctggactcgttcagaagattccgctgttttgagttggctgctgagcaggagaccctg
cctgatgtgtgttatggcctcattggaagcctgtcggctcgcatacacaacggtgccatg
ctttgcaggtgcaacattcagggttctcatggcccctactgcagtaaattcggagggctc
tgtgagtgcaaggccaacgtggttggccgctgctgtgactcctgcgcccccctgaacttc
ggcttcggacccaacggctgtgcaccctgtgagtgtgaccctcgcggtgcagtggcggag
ctgtgtgaccaggtcagaggtcagtgtccgtgtcgtatggaggtgggcgggcgacgctgt
gatcgttgcctgtctgggtactacggcttcccactgtgtcggccctgtaagtgtaacggc
ctggctgaactgtgtgaccaggacactggagcctgcctggactgcaaggagcactccacc
ggatacaattgtgagagctgtgtggagggttactttggtgacccagtctccagggagccc
tgtaagccttgtctgtgtcctgacactcagtccagtggacggttctttgccagcacctgc
aacaaggacccagagtctggtagcctgacttgtgactgcctggctggacacacaggtctc
cgctgcgatgcctgctccgctggtttctacggcgacctgaccgcgccgggcggcggaggc
tgcgacgagtgtctatgtaacaacaacatcgaccctgctgacagtgacgcgtgtgacagt
gtgacgggcgagtgtttgcgttgcctccacaacacccagggaccccgctgtcagagctgt
aagcctggctactatggagacgcactggcccaggactgcaaagagtgctcctgtgaccgg
cagggaacggatgtgacccagtgccctctgggcagcccgtgtttctgtgacccgctgacg
ggtcagtgcccgtgtcgggcgggcgcggtgggcacgctgtgtgacgagtgtgccaccggc
ttctggaacattcagggagagtccgggtgccaaccgtgtaaatgtgaccctgctaactcc
ttcaataaccactgtgacaaggtgactggtcattgccagtgtcgtactgagtttggagga
agacagtgtaatgagtgtggggaaaatcactttgggaaccctgacctgcagtgtgtttcc
tgcgattgtaacatggagggtaccgaccgccccgcctgcaacccattgacgggtgagtgt
ctgtgccgcgttggtgtgatgggcatcttctgtgatgagtgtgcccctgggtatgaccaa
gtcttccccgcctgcctcccgtgccacccctgtgccgtcctgtgggcggacaacgtcacc
gacgtccaccgtgccgcccagaggatgcgcaccttcatccctcccccccgcgaacagctg
gagcctggacacagtcgtcagttgcaacgaatgctggagatgcactccaagctggactat
ctggggaacctgacagggagatccctacctcgggtgaaagacgtggagaagctgtgtgtc
ataatctcgaaactcaaagactccatagaccccaacgccatcatcgtggactcatcatct
cttctgaacactgagatcgacaacatccaccacgagttcaagatgctgttggataactta
aggaacaaaatcggcgaggctccaaaactagatctaaaagaaatgcaggaggccctggag
aagatccggaagcagcatgcagacttcatggctgatgagaagaaggtgaaggaggccgag
agggccctggagaactccatggacacacggcaggaaatcaaagaccatctgtccagctgc
agcatcttgggagacatggaggggctggagaagaaggtcaaggctctgagtgtggccaaa
ctcaacaaaaacatctgtggaggcccaggcgatgaggaatgctccaaatcagagtgtggg
ggtgcgctgtgtcgagacttcctgggacagagagaatgtgggggtcctacgtgcaagggc
agcttccctgtgagccacaatgccacaaaaacagctgagcaagtagagaatgaccttatc
gacctgctccaaaaactaaaggactccaagatcaagatcaatgaggccaaacaggtgacc
caaggcactcatgagcaggcagaggagctacagaagaagatcactgacagcaaggagaag
tataagagggagaagaatgacaccaaggacctcatcaatagggtcaaagactacctcaca
gatgagatggtggcgccagaggacatagagaatttggtcaaggttgttctggccatccag
ctgccgggctctccggacgacatccgctccatgatccagaacatccggggcgtgctgacc
aacttcattgagttcaaggaggatctgaaaaaactgaaggaccaagccaagacagcccag
gacctgctggagaaagctcaggctatcagggacagaaccagggctattgatgttacggat
ctcaagaaaaccatcacggacactgagaatacacaggacagggtcgcgcaagacctggag
aaggctaaggaaagccatggcgtggcggacaagatgattaaagagattgagaagaaactg
aacaacatagagactaacttgaactctactagaactccagagatgctggaggagattgag
gttctgaagagcaagaccgagatgaacagagagcaggcggagcaggccaaagctgatgca
gatgcagccataggtgccactactgacgcagagaaggggcttgacaaggtgactgcgctg
tttgataggctaaagacgggaaacacaaaccagaccaataatgaagcggccaacgaacgc
ctgaagaacattactgtggaggcagagaaagttgcaaaagacatccgagataaaattcaa
caaattgacgacttggagaaaaagatccaagacttcatcagaaacaaagaggacaaggcc
aaggaggttgccatgttgctggagatggtagaagccctccaaaaggagattactgcgcgt
gtggatggttacattaactgtacctcctaa

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