Oncorhynchus mykiss (rainbow trout): 110524129
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Entry
110524129 CDS
T07259
Symbol
grin3bb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B isoform X1
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04020
Calcium signaling pathway
omy04080
Neuroactive ligand-receptor interaction
omy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
110524129 (grin3bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110524129 (grin3bb)
04082 Neuroactive ligand signaling
110524129 (grin3bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110524129 (grin3bb)
Ion channels [BR:
omy04040
]
Ligand-gated channels
Glutamate (ionotropic)
110524129 (grin3bb)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
110524129
NCBI-ProteinID:
XP_036833839
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Position
5:complement(57641220..57750792)
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AA seq
1162 aa
AA seq
DB search
MNLIFSRFLAYFYFGFQVILQFFIDPCHLHPQPCHILAQIGHTVRLGALLPTRQPARVQA
ALNRALTGLVQTGDNFLPYNLSLEVVPREPANGDPESLFRCVCQAIVVQGVSAVLAFPQT
QEEIVQVEFMASFLEIPFISIIEHGEPLKTQNRFHLQMVTRIPPSGLSELLLTILQRSGW
QEGMAVLCQGWEEAGLLELLELQSRLGWGATRWHLRALLNLTRAGPTESEIQDFLSEHFR
GQGPSQILPPAAVLLFGADPECAAAVLRSAQDLGLTLPTVHWVLGYPLSPDTLHSIGLPL
GLLAYGEVERKPLDFYIRDALQLVGQAVAAATVVRPDLALIQNMVNCYDKPNKHEVPSSG
QYLARFLSNTSFSGLTGPVSVQRNLSRVLTSQRFHIWSLRRDAVGQPTWVTVGSWEGGRL
KVEDQSLWQGPNGKGHDRGEGQRSGGRWQAGMPVADSRVRVVTLVEHPFVFTREVDEDGN
CPAGQYCLDAGTNSSDMLESYFSERASGNSTFLPTDYSKCCYGYCIDLLEKLAEDLRFEY
DLYIVGDGKYGASKSGRWTGLVGDLLNGVADMAVTSFSINSVRSRVIDFTSPFFSTSLGI
LVRSKDTAAPIGAFMWPLHWSMWVGIFVALHITALFLTLYEWKSPFGMTPHGRNRLRVFS
YSSALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFE
ELSGIHDAKLHHPSHGFRFGTVRESSAEEYMKKSFPEMHEYMRRYNEPTTPDGVSTLKVD
PPQLDAFIMDKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQNSPLTNNVSEFISRYK
SDGYMDMLHDKWYKVVPCGKRVFAVTETLQMGIRHFSGLFVLLCVGVATSLLTLAGEHAF
YHMVLPRIRRRQKYKYWLHTSQKIHRALNQTYEDVKKKQDTNTEKSSCCIQKNQHPQPPP
DPLLSRASAKWNSENSRDAAAAKDNKRVHFNLETLNSRRLLARGVTKSEGDRGGEGIPGA
NQATRVCANGGFGTSFANLVLSLPSASSSSIPSSSSSLGVPPRPGELQELQEKIDLIRDQ
LRTALARRAELQTSLAKEKAACSAPIVSGMPPVVLAAASLPTSTKTTSSLPSTRCATTMT
DPVLKALPTVRTAPAKHTNEKR
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaatcttctcaagattcttggcatacttttacttcggattccaagttattcta
cagttcttcatcgacccttgtcacctccatccccagccgtgccacattctggcgcagata
ggacacaccgtgcgccttggtgcccttctgcccacccgccagccggccagagtgcaggct
gccttgaaccgcgccctcaccggtctcgttcaaactggggacaactttctaccttacaac
ctgagcctagaagtggttccccgagagccggccaacggagatccggagtcccttttcagg
tgtgtttgtcaggctatcgttgttcagggggtctccgctgttctcgccttcccccagacc
caggaagagatcgtacaagtggaatttatggcttcttttttggaaatcccttttataagc
atcattgaacacggagagcctctgaaaacacagaaccgcttccacttgcagatggttacg
cggatccccccgtcaggcctgtcagagctgctgctgactattctccagcggagcggctgg
caggagggcatggctgtgctgtgccagggctgggaggaggctggcctgctggaactactg
gagctccagagccgccttggctggggcgccacccgctggcacctccgagccctcctcaat
ctcacccgggccgggcccacagaatccgaaatccaggacttcctttcggaacacttccgg
ggacaggggccaagtcagatcctgccaccggccgcggtactgctgttcggggccgacccg
gagtgtgcagcggcggtgctgcggagtgcccaggacttggggcttacgctgcccacagtg
cactgggtgctgggctacccactgagccccgacaccctgcactccatcggcctgcccctg
gggctgctggcctacggtgaggtggagcgcaagccgctggacttctacatccgcgacgcg
ctgcagctggtgggccaagctgtggcagcagccacagtggtgcgtcccgacctggcgctc
atccagaacatggtcaactgctacgacaagcccaacaagcacgaggtgccctcgtccgga
cagtacctcgccagattcctgtctaacacgtcgttctcggggctgaccgggccggtgtcg
gtgcagaggaacctgtcccgggttctcacctctcagcgcttccacatctggagcctgcgg
cgggatgcggtgggccaacccacctgggtgacggtgggcagctgggagggaggccgcctg
aaggtggaggaccagagcctttggcagggtcccaatggcaagggccacgaccggggggag
ggccaaaggagtgggggccggtggcaggcaggcatgcctgtggcagacagccgggtgcgg
gtagttaccctggtggagcacccctttgtattcacgcgggaagtcgatgaggacgggaac
tgcccggcgggacagtactgcctggacgcagggacgaacagctctgacatgctggagagc
tacttcagcgagcgtgcctcgggaaactctaccttcctgcccacggactacagcaagtgt
tgctacggatactgcattgacctgctggagaaactggccgaggacttgcgctttgagtac
gacctgtacatcgtgggtgacgggaagtatggagcgtcgaagagcggccgctggacaggg
ctggtgggcgacctgctcaatggcgtggccgacatggccgtcacctcattcagcattaac
tcagtgcgtagccgcgtcatcgacttcacctcgcccttcttctccacctcgctaggcatc
ctagtgcgcagcaaggacacagcggcgcccattggcgccttcatgtggccccttcactgg
tccatgtgggtgggtatcttcgtggcactgcacatcaccgccctcttcctcaccctctac
gagtggaaaagcccttttggcatgacgccacacggacgcaaccgcctgcgggtcttctcc
tactcgtcggcgctcaacctgtgctacgccatcctgttcggccgcacagtctccagcaag
actcctaagtgctggacgggtcggtttctgatgaacctgtgggccatcttctgcctgctg
gtgctgtccagctatacagccaacctggccgccgtcatggtcggcgagaagacattcgag
gagctctcggggatccacgacgccaagctccaccacccgtcccatggtttcaggtttggg
acggtgagggagagcagtgccgaggagtacatgaagaagagtttcccagagatgcacgag
tacatgaggcgctacaatgagcccaccacacctgatggagtgtccaccctcaaggtagat
ccccctcagcttgatgccttcatcatggacaaggccctgctggactacgaggtgtccatc
gacgcagactgcaagctgctcaccgtgggcaaacccttcgccattgaaggctatggaata
ggcctcccgcagaactcccctctgaccaacaacgtgtcagagttcatcagtcgctacaag
tcagacggctacatggacatgctgcacgacaagtggtacaaggtggtgccctgtgggaag
agggtgttcgccgtcaccgagactctccagatgggcatccgtcacttctcagggctgttt
gtgctgctgtgtgtgggcgtggccacgtcgctgctcaccctggctggggagcacgccttc
tatcacatggtgctgccccgcatccgacgacgacaaaagtacaagtactggctccacacc
agccagaaaatccaccgagccctgaaccagacctatgaggacgtgaagaagaagcaagac
accaacacagagaaaagtagctgctgcatccagaagaaccagcacccccagcctccccct
gacccccttctctccagggcatcggccaagtggaacagcgagaatagcagggacgctgca
gccgctaaggacaacaagcgcgtccactttaacctggagaccctcaacagccgccgcctg
ctggcccggggcgtgaccaagtccgaaggggacagagggggggaaggtatccccggggct
aaccaggcaacacgtgtctgtgcaaatggaggcttcgggacttcctttgccaacctggtg
ctctccctcccctccgcctcttcttcatccatcccttcttcatcttcctccttgggcgtt
cctccaaggccaggggagctacaagagctacaggagaagatcgacttgatccgggatcag
ctaaggacggctctggccaggagggctgagctgcagacttctctggccaaggagaaggcc
gcctgctctgcacccatagtgtcaggaatgccccccgtggttttagctgcagcatccctc
cccacctccaccaaaaccacctcgtccctcccctccacccgctgtgccaccaccatgaca
gaccctgtcctcaaggccctgcccacagtccgcacagcccccgccaaacacaccaacgag
aagaggtga
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