KEGG   Oncorhynchus mykiss (rainbow trout): 110524130
Entry
110524130         CDS       T07259                                 
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18 isoform X1
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:omy03009]
    110524130 (wdr18)
Ribosome biogenesis [BR:omy03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    110524130 (wdr18)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WDR18_C Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_TEP1_2nd NBCH_WD40 WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_EML WDR55 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_Nup120_160 Beta-prop_WDR19_1st Ge1_WD40 WDR54 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 110524130
NCBI-ProteinID: XP_036833844
Ensembl: ENSOMYG00000031522
UniProt: A0A8C7SPI9
LinkDB
Position
5:complement(57771636..57862459)
AA seq 431 aa
MSAPMEIVLSADSAGQLWNCAVLELHSGTNLLAYRGGNTSSRSLTVLNGEYILGAQLGKN
FINVWEIQRKDQLQQKIVCPGIVTCLTASPNGLYLVAGIADAIYLWEVSSGNLLAILSRH
YQDLTCLRFSDDSSHFISGGKDNLALVWSLASVVQLDPSHTPEPRHVLSRHSLPITDIHC
GLMGPQARVATASLDQTVKLWELSSGEMLLSVLFDVGIMSVTLDPCEYYLFCGGSDGGIF
QVSLCSQSLSRDKTFQSDNEGNQVFKGHRNLVTCLSVSMDGTLLLSGSHDETIRLWDIQS
KQSVRSINHKGPVTNALIIPAPANMFLPDSRPGIPLPRFSRHLNPSEQGEGVETGGVCLR
LAPHTQAQKETYLEKADKLYSIMSAVTDKSVFGDGENTKVRVSELEEEVRTLKKVNKDLY
DFSTQLLTKPS
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtccgcgcctatggaaatagttctgagtgccgattcggctggacagctatggaactgt
gccgttttggaactccattcgggcacaaatctcttggcctatcgaggtggcaatacttct
tcgaggtcactcacagttttgaatggagagtacatcctcggagcccaactcgggaaaaac
ttcatcaacgtgtgggaaatccagagaaaggatcagctgcagcagaaaattgtgtgccct
gggattgtgacatgcttgactgcatcccccaatggcctgtacttggtggcaggcattgct
gatgccatctacttatgggaggtttcctctgggaatttgctggccatcttgagccgccat
taccaagacctgacctgcctacgcttcagtgacgacagcagccatttcatctcaggaggc
aaagacaacctggcactggtctggagtctagccagtgtggtgcagctggatccgtcacac
acccctgagcctcgtcatgtcctgtcccgtcattctctccccatcaccgacatccactgt
ggcctgatgggaccccaggctcgagtagctactgcatccctggaccagacagtcaagctt
tgggagctatcctctggcgagatgctcctgtctgttctttttgacgtaggcatcatgtct
gtgactcttgacccctgcgagtactacctcttctgcggtggcagtgacggcggtatattt
caggtgtccctctgtagccagagcttaagtcgggataagactttccagtcggacaacgag
ggcaaccaggtttttaaaggacacaggaacctagtgacatgtctgtctgtgtctatggat
ggcactctcctcctctcgggctcccacgatgagaccatacgactgtgggacatccagagc
aagcagagcgtccgcagcatcaaccacaaaggtccagtcacaaatgccctcatcatccct
gcccctgccaacatgttcctgcctgacagccgcccgggcatacccctgccccgcttcagc
cgccacctcaacccctcagaacagggcgagggcgtggagaccggaggagtgtgcctgcgc
ctggccccccacacccaggcccaaaaggagacctatttggagaaagcagacaaactctac
tccatcatgagtgccgtaacagacaagagtgtgtttggtgatggcgagaacaccaaggtg
cgtgtgtcggagctggaggaggaagtgagaacgctgaagaaggttaacaaggacctgtac
gacttctccacacagctcctcaccaagcccagctag

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