Oncorhynchus mykiss (rainbow trout): 110524136
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Entry
110524136 CDS
T07259
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03010
Ribosome
omy04120
Ubiquitin mediated proteolysis
omy04137
Mitophagy - animal
omy04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
110524136
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110524136
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110524136
04137 Mitophagy - animal
110524136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
omy03011
]
110524136
04121 Ubiquitin system [BR:
omy04121
]
110524136
Ribosome [BR:
omy03011
]
Ribosomal proteins
Eukaryotes
Large subunit
110524136
Archaea
110524136
Ubiquitin system [BR:
omy04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
110524136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Ubiquitin_5
zf-C4pol
TBK1_ULD
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
110524136
NCBI-ProteinID:
XP_036833849
Ensembl:
ENSOMYG00000031649
LinkDB
All DBs
Position
5:58028761..58030894
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTSN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagacgttgacggggaaaaccatcacccttgaggttgagcccagc
gatactattgaaaatgtcaaggccaagatccaggataaggaaggtattcctcctgaccag
cagcgtctgatctttgctggaaaacagcttgaagatggtcgtaccttgtcagactacaac
atccagaaagagtccaccctgcatcttgtgctgcgtctgcgtggaggcatcattgagcca
tctctgagacagctggcccagaagtacaactgcgacaaaatgatctgccgcaagtgctac
gctcgcctccatcctcgtgctgtcaactgccgcaagaagaagtgtggacacaccagcaac
ctgcgccccaagaagaagctgaagtaa
DBGET
integrated database retrieval system
