Oncorhynchus mykiss (rainbow trout): 110524174
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Entry
110524174 CDS
T07259
Name
(RefSeq) iroquois-class homeodomain protein IRX-5
KO
K24889
iroquois-class homeodomain protein IRX
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110524174
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
110524174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
110524174
NCBI-ProteinID:
XP_021459245
Ensembl:
ENSOMYG00000014902
UniProt:
A0A8C7Q4S4
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Position
1:complement(47785638..47788293)
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AA seq
450 aa
AA seq
DB search
MAYPQGFLFQPSVSLALHSCPPFSSSVILGGPRTEELGRSSSGSAFAPYAGSPAFNGSSP
GFNSHLQYSGEQTAALNSFVGSAYDPSAGIAGSLEYHPFGVALGYPYGDPAYRKNATRDA
TATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNR
SEDEEEDDNIDLEKNDDEEEPLKPTAEIGSKNEAVGQHPNPVGIPCEKYKEDNSGNDMEP
VLIDPNVKDHGDRRVPEMPRPTTAASPQNADLGVERDSDSAASESPPPLRRNDSGNSSNA
TSVIHSALPAPKPKLWSLAEIATSSDKCKGCSDAAQTVPRQLRTEIPGGRPMSSPLRDAS
QNIFPHSAALSRHVYYTSPFFQGYSNYHGTFGHLQNPGSNMGSATHLNGLHQTMLHRAEA
LARDSQARSQTQIDICKDLRYEIKKGMTHV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcctatcctcaaggctttctcttccaaccgtcggtgtctctagctctccattcctgt
cccccgttcagttccagtgtgattttaggaggaccaaggacagaggaactgggccggtcg
tcttcaggctcagccttcgccccttacgcgggatcaccggcgttcaatggttcatcccct
ggcttcaattctcacctccagtatagcggagagcagaccgcggcactgaactcatttgtg
ggctccgcgtacgatccctcggcgggtatcgctggctctttagagtatcacccgttcggt
gtagcattgggctatccatatggagaccctgcatacaggaaaaatgctacaagagatgcg
actgccactctcaaagcgtggctcaatgaacaccgtaaaaacccctacccaaccaagggt
gagaagatcatgctggccatcattactaagatgacccttacccaagtgtccacctggttc
gccaacgccagacggcggttgaagaaagagaataaaatgacgtggaccccgaggaataga
agtgaggatgaggaagaagatgacaacattgacctggagaagaatgacgacgaagaagag
ccacttaagcccacggcagaaattgggtcgaaaaatgaagcagttgggcagcatccaaat
ccagtgggaatcccctgtgagaaatacaaagaagacaatagcggcaatgacatggaacct
gtcttaattgatccgaatgtaaaggaccacggggacaggagagtgcccgagatgccacgg
cccaccaccgcagcatctccccaaaacgcggaccttggagtggaaagggattcagactcc
gcagcctcggaaagtccacctccactgaggcgtaatgactcaggcaactccagcaatgct
acatcagtgattcactcggcccttccggccccgaaaccaaaactgtggtcgctcgcggag
attgcaacttcttcggataaatgtaaagggtgtagtgatgccgctcagaccgtgcccaga
caattacgtacagaaattccgggcggtaggcctatgtcatctccattacgagacgcttct
cagaatattttccctcacagtgcagccctatccagacatgtctattatacgtctcccttt
ttccagggttactcgaactatcatggcacttttggacacctgcagaaccccggatccaac
atggggtcagcgacgcatttaaatggattacatcaaactatgttacacagagccgaggct
ctggcaagagacagccaagccaggagccaaacacagatagatatttgtaaagacttgaga
tatgaaattaagaaaggtatgacacatgtctag
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