Oncorhynchus mykiss (rainbow trout): 110524185
Help
Entry
110524185 CDS
T07259
Symbol
rpgrip1l
Name
(RefSeq) protein fantom isoform X2
KO
K16550
protein fantom
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omy01009
]
110524185 (rpgrip1l)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110524185 (rpgrip1l)
Protein phosphatases and associated proteins [BR:
omy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110524185 (rpgrip1l)
Cilium and associated proteins [BR:
omy03037
]
Primary cilia and associated proteins
MKS complex
110524185 (rpgrip1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-C2_1
RPGR1_C
C2
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
110524185
NCBI-ProteinID:
XP_021459279
Ensembl:
ENSOMYG00000015024
UniProt:
A0A8C7VLF7
LinkDB
All DBs
Position
1:47949465..47978305
Genome browser
AA seq
1327 aa
AA seq
DB search
MSTFADETAADVPVKDITLNLTKVGVGLSEMLVAQNARARQAILRVSREELEDRFLRLHE
ENLLLKQHTHKQEDKIKRMATKLVRLVKDRRRVEQVAAGGVRPGSRDVELEEMMEELQEK
VQELQMQNEGLKQRLLAAKQQLQTQSKRPTPYGHVQSRVNTGLRRLREDTFSLAQLPPAA
PRGPRSVEVEMSGRAPQGLLPRYGHSLLDDARAEIRNLENVIETQRSHIEEMDKATELLR
DQLRRKERKFEESLLHLREQQTTGQRSTIKDNVEMIRLQKQLVEKGNAFTVLEGRFLQLQ
ESQRTLKVSHEAVMAKVDELMGQLKDERLRSLGLESQLQANSFSQRRTEELQEQIFDLEK
ERVLLKENCDKLVNSAFDVSQDQTFRMREQQLKLQIAQLELALKSDLTDKNEILDKIKVE
RDMNEKLSQEKEDIQLRFLEQKQQLDEIRDRIKFYTKESEVDVAELSEALMLIKVRKSQR
SGELGFLEQVEEEVRSDTEHSVRELQATYAETIQELEKTRNMLIVQHKINKDYQAEVEAV
TRKMDDSKLQYELKLERLAQLLDMRAAKIKKLEAQLKDIAYGTKSHVFKPEVTDDDVADE
FDETVHLERGENLLEIHIGMATLSPVALETLSDREPSTFCTYAFYDFELQATPVVRGARP
AYGFTSQYVVRVDDLFLQYLHTGSVTLELQLARGMDFTTVAVGQLRLSQLLENDSKAHGI
VQLVGVAGEVQSFGSVEYWVRLRVPMEQAIRLYKERVKALGYLGSAFNTEQQESTSTLTP
HSVSADGGMNLNELNVTVRCCSNLTSRHAQPPSPYVVYQFYDFPDHDTCIVGDCSEPQFE
DNMSFPVAMEAELDSYLKAGALLLYVFDDHDTQSEMYLGKARVPLLSLAHDKAITGTFEL
TDPSGLPSGHIDVTLKWKFTYLPPPGSTMTVEQAKFVPKERPVKLTTRKVEEKKVEVEEK
RKEEGGKKEELRMVVKEEKRAKALIPLPTTSTASEMPLPKPRLRTVVKEKTASKKVSFVD
VTAPGNQEAKNFSCPSILPGTEKREVSKLLPLTKVFTGSAVAPEPPQSTTEEEDDEEESH
FSEGQVIVASSQSTSDESDISEEILEQMEDLEAAPVAEDEEQSESILSDSDDCIVPGQSS
MGRKPSERVRVEIVSLSLRPESRAAADCSVVRLFVEYSLLDMPSEETPLSLPKPSPGKTS
HYNYSNVIHVDIENNKSRREILRGVLEGRNPQMESIRFTVVSEPPEEEEQEKECEDVGVA
FFRIPDILEQQQDLIETSLNIVDVQDNSVVVGSLCVSVEGLEALQSIMEDADHDYTPLSS
LEQKAEG
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgtttgctgacgagactgcagcagatgtgcccgttaaagacatcaccctaaac
ctcactaaggttggagtgggattatcagagatgctggtagcccagaatgcccgggcgagg
caggcgatcttgcgggtgagcagggaggagctggaggacaggttcctacggctccatgag
gaaaacctgctcctcaaacaacacacacacaaacaggaggacaaaatcaagaggatggcc
accaagctggtgcgcttggtgaaggaccgtcggcgtgtggaacaagtggctgcaggtggg
gtgcgaccagggagccgggacgtggagctggaggagatgatggaagagctgcaggagaag
gtccaggaactgcagatgcagaatgagggcctgaagcagcgcctgttggccgccaaacag
cagctgcagacacagagcaaacggcccaccccctatggccatgtccaatcacgagtcaat
acaggcctgcggaggctgagggaggacacgttcagcctggctcagctaccccctgctgcc
cccagaggccctagaagtgtggaagtggagatgagtggcagggcccctcagggtctgctg
cccagatacggacacagtttgctggacgacgccagagctgagatccgcaatcttgagaat
gtgattgagacccaacggtctcacatagaggagatggacaaagctacagagctgctaagg
gaccagctgaggaggaaggagagaaaatttgaggagtcgctcctccacctgcgagagcag
cagaccactgggcagagatctactatcaaggacaacgtggagatgatcaggttgcagaag
cagcttgttgagaagggcaacgcgttcactgtgctcgagggccgattcctacaactccaa
gagagtcagaggaccctgaaggtcagtcatgaagctgtgatggccaaggtggatgagtta
atgggccagctgaaagacgagcgactgaggagtctgggcctggagagccaactacaggcc
aactcattctcacagagaaggacagaggagttgcaggagcaaatctttgacctggagaag
gagagagtgttgctgaaggagaactgtgataaactggtgaacagtgctttcgatgtaagc
caggatcagacatttaggatgcgggagcagcagctgaaactacagatagcccagctagag
ttggcactgaagtcggacctgacggacaaaaacgagattctggacaagatcaaggttgaa
agagatatgaacgaaaaattgagccaagaaaaggaagacattcagcttcggttcctggaa
caaaagcagcagttagatgaaataagggatcgaatcaagttttacaccaaggagagtgag
gtcgatgtggcagaactcagtgaggcactgatgctaatcaaggtgcgtaagtcccagagg
agtggtgagctgggcttcctggagcaggtggaggaggaggtgcgtagcgacacggagcac
tccgtgagggagctgcaggccacgtacgctgagaccatccaggagctggagaagaccagg
aacatgctcatagtccagcacaagatcaacaaggactaccaggcggaagttgaagcggtg
acgcgtaagatggatgactccaaactgcagtacgagctaaagttggaacgccttgcccag
ctgctggacatgagggctgccaagatcaagaaactagaggcccaactgaaagacattgcc
tacggcaccaaatcacacgttttcaaacccgaggttaccgacgacgacgtggccgacgag
ttcgacgagaccgtacacctagagcgtggagagaaccttctggaaatccacatcggcatg
gcgaccctctccccagtcgccctggagacactgagcgaccgcgagccctccaccttctgc
acctacgccttctacgatttcgagctgcaggctacacccgtagtcaggggagcccggccg
gcgtacggcttcacgtcgcagtacgtggtgagggtggacgatctattcctgcagtacctc
cacacgggttcggtgacgctggagctgcagctggcccggggcatggactttacgactgtg
gctgtggggcagctcaggctgtcgcagctcctagagaacgacagcaaagcccatgggatc
gtacagctggttggtgtggctggcgaggtgcagtcatttggctctgtggagtactgggtg
aggctgcgggtgcccatggagcaggccattcggctgtacaaggagagagtgaaagccctg
ggctacctcggctctgctttcaatacggaacagcaggagtcaacctcaaccctaaccccc
cattcagtgtcagccgacggaggcatgaacctgaatgagctcaacgtcaccgtccgatgc
tgcagcaacctgacctcccgccatgcccagccacccagcccctacgtggtctaccagttc
tatgacttccctgaccacgacacctgcatcgtgggcgactgcagcgagcctcagtttgag
gacaacatgtccttcccagtggccatggaggcagagctggacagctacctgaaggcaggg
gctctgctgctctacgtgttcgatgaccacgatacccagagtgagatgtacctgggcaag
gccagggtgcccctcctgtctctggcccacgacaaggccatcactggtacatttgagctg
actgacccgtccggcctccccagtggccatattgatgtgacgctgaagtggaagttcacc
tacctgcctcctcctggctctaccatgacagttgaacaggccaagtttgtacccaaagag
agaccagtgaagctaacaacacgaaaggtagaggagaagaaggtggaagtggaggaaaag
aggaaagaggagggggggaagaaagaggagttgaggatggtggtgaaggaagagaaaagg
gccaaagctttaattcctcttcctactacttcaactgcatccgagatgccgttaccaaag
cctagactacggaccgtggtgaaagaaaaaacggcaagcaaaaaagtctcattcgtagat
gtcacagcacccggaaatcaagaagctaaaaacttttcatgtccctctattttgcctgga
acagagaaaagggaagtctcaaagttactgcccctaacaaaggtgttcacagggtcagcg
gtagcaccagagcctcctcagagcaccacagaggaagaggatgatgaggaagagtctcac
ttctctgagggacaggtgatcgtagccagctctcagtctacctcagacgaatcagacatt
tccgaggagattctcgaacagatggaagacttggaggcggccccagtggcagaggacgag
gaacagagtgaatctatcctctcagacagtgatgactgcattgttcctggccagtcctcc
atgggacggaagccttcggagcgcgtgcgcgtggagatcgtgtctctgagcctgaggcct
gagtcgcgggcagcagcagactgtagtgtggtcaggttgtttgtagagtactccctgttg
gacatgccctctgaagagacgccactgtccctgcccaaaccctcgccgggtaagaccagc
cactacaactacagcaatgtgattcatgtggacatagagaacaacaagtccagacgggag
attctaaggggggtgctagagggacgcaacccccaaatggaaagtatcaggttcacggtg
gtgagcgagccaccggaggaggaggagcaggagaaagagtgtgaagatgtaggcgtggcc
ttcttcaggatccctgacatcctggagcaacagcaagacctgattgagaccagcctgaac
attgtggatgtgcaggacaacagtgtggtggtgggcagtctgtgtgtgtctgtagaggga
ctggaggcactacagtctatcatggaggacgcagaccatgactacacgcccctctcctca
ctggaacaaaaggcagagggttaa
DBGET
integrated database retrieval system
