Oncorhynchus mykiss (rainbow trout): 110524227
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Entry
110524227 CDS
T07259
Name
(RefSeq) fibrillin-2 isoform X1
KO
K23342
fibrillin 2/3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110524227
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
omy00536
]
110524227
Glycosaminoglycan binding proteins [BR:
omy00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110524227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
EGF
TB
hEGF
EGF_3
Fibrillin_U_N
Plasmod_Pvs28
EGF_FBN_1st
EGF_MSP1_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
110524227
NCBI-ProteinID:
XP_036833895
LinkDB
All DBs
Position
5:60770756..60861371
Genome browser
AA seq
2890 aa
AA seq
DB search
MGAGKLARLLLGWAAVCWAAVHTAYGQAGAGDGGYQASRFTGKVDEREVQRVRRRGQETL
RGPNVCGSRFHSYCCPGWKTLPGGNQCIVPICRNSCGDGFCSRPNMCTCGSGQLSPSCGA
GAGAGMQSCNVRCMNGGSCQEDSCSCQKGYTGNHCGQPVCENGCQNGGRCIGPNRCACVY
GFTGPQCERDYRTGPCFTQVNNQMCQGQLSGIVCTKTLCCATIGRAWGHPCEMCPAQPHP
CRRGFIPNIRSGACQDVDECQAIPGLCAGGNCINTVGSYECKCPAGHRQSDTSHKCEDID
ECSTNPGVCDGGECTNTAGSYVCTCPRGYITSTDGARCVDQRVGTCFSALASGRCAGDLQ
GQYTKMQCCCDTGRCWASGQIPEMCPVRGSDEYRRLCIDGVPHGTGNGGFPHGVFPNGGG
SNGNGYSYGYKLNPNGPNGNGHHGNGGGIGGGGQGGGGGNGFGGNGGGRNIVSLNETVDV
CKHFTNLCLNGRCIPTPTSYRCECNMGYRQDVRGECIDVDECVSNPCVNGDCVNTPGSYH
CKCHEGYQGTPTKQACIDIDECIVNGVMCRNGRCVNTGGSFQCICNAGFELTPDGKNCID
HDECATTNMCLNGMCINEDGSFKCICKSGFALAPNGRYCTDIDECQTPGICMNGRCLNSE
GSFRCECPPGLAIDVDGRVCVDTHMRTTCYGAIKMGTCSRPFPGAVTKSECCCASPEHGF
GEPCLPCPARNSAEFQAVCSSGIGITADGRDINECALDPDICQNGMCENLRGSYRCICNI
GYESDSSGKNCVDINECLVNRLLCDNGLCRNTPGSYTCSCPKGFVFKPDSETCEDINECD
SSPCVNGICRNIAGSFNCECSHGSKLDSTNTICVDSMKGTCWLNIQDGRCEVNINGATLK
SECCSTLGAAWGSPCERCEIDTACSRGFARMKGVNCEDINECEVFPGVCTNGRCVNTQGS
FLCECAEGLTLDGSGRTCVDVRSEQCYMKWHEDECGEPLPGRYRVDMCCCSVGAAWGIDC
EECPKAGTPENKAICPRGPGFANRGDILTGRPFYKDVNECKVFSGLCSHGTCRNTIGSFK
CRCSSGFALNMEERNCTDIDECRISPDLCGHGTCVNTPGSFECECFEGYESGFMMMKNCM
DIDECERNTLLCQGGACLNTEGSYECECPPGHQLSPDGSSCEDVNECQLSNNLCKNGHCV
NMVGNYQCSCDTGYQVTPDRQGCVDIDECTIMNGGCDTHCTNSEGSYECSCSEGYALMPD
LRTCADIDECEDSPDICDGGQCTNVPGEYRCLCYDGFMASMDMRTCIDVNECELNPNICL
HGDCENTKGSFICHCQLGYFVKKGSTGCTDIDECEIGAHNCDMHAACVNVPGSFKCRCRD
GWVGDGIKCVDVDECSTEEHNCNLNADCVNTPGSYRCACKEGFNGDGFSCSDMDECADNV
NLCENGQCLNAPGGYRCECEMGFTPTEDSKACQDIDECNFQNICVFGTCQNLPGMFRCVC
DDGYELDRSGGNCTDINECADPVNCINGLCVNTPGSYLCNCPPDFELNPTGVGCVDTRVG
NCFLDTLARGDGGISCSAEIGVGVTRASCCCSLGGAWGNPCELCPPINSTEYKTLCPGGE
GFRPNPITVILEDIDECQELPGLCQGGNCVNTFGSFQCECPAGYYLNEETRICEDIDECT
AHIGICGPGTCYNTLGNYTCVCPPEYMQVNGGNNCMDMRKSVCYRNFNDTCENELSFNMT
KKMCCCAYNVGKAWNKPCEACPTPVTSEYQVLCGNQAPGFIIDIHTGKPIDIDECREIPG
ICAHGACINQIGSFRCECPMGFSYNNILLICEDIDECNSGDNLCQRNANCINFPGSYRCE
CSPGFKLSPSGACVDRNECQEIPNVCSHGECIDTQGSYRCLCHNGFKATADQTMCMDIDE
CDRQPCGNGTCKNTVGSYNCLCFPGFELTHNNDCMDIDECSALVGQVCRNGQCINSLGSF
QCLCQDGYELTPDGKNCVDINECVSLPGTCSPGTCQNLDGSFRCICPTGYEVQNDQCIDI
NECEVEPNICQFGTCTNTPGSFQCICQNGFVLSDNGRRCFDTRESFCFTRFESGKCSVPK
AFNTTKAKCCCSKMPGEGWGDPCELCPHDSEASFKSLCPYGHGSLPGLGETREDMNECLD
NPGVCVNGVCINTDGSFRCECPFGYNLDYTGVNCVDTDECSIGNPCGNGTCTNVVGGFEC
SCHEGFEPGSMMTCEDINECSLNPLLCAFRCVNTFGSYECMCPSGYVLRDDHRMCRDQDE
CSEGLDDCESKGMSCKNLIGTFMCICPPGMQHRPDGDGCMDLNECRAKPGVCKNGRCENT
VGSYRCVCNEGFQPSSTGTDCIDNRQGFCFTEVLQTMCQQGSTNRNSVTKSECCCNLGRG
WGPQCELCPLPGTVQYKRMCPLGPGYTTDGRDINECTVMPDLCKNGQCINTIGSFRCHCN
VGYTTDFTSTSCIDMDECSASPKPCNFLCKNTEGSYLCSCPRGYTMQPDGKTCKDLDECS
TKQHNCQFLCVNTIGGFTCKCPAGFTQHQTACIDNNECNGQNSVCGSRASCVNTPGSFNC
DCGKGFSLDTTGLECEDVDECGSNHRCQHGCQNMMGGFRCGCPQGYVQHYQWNQCVDENE
CSGASVCGSASCYNTLGSFKCLCPSGFDFEQGGGGCQDVNECSMGSNPCSFGCSNTDGGY
LCGCPGGYYRAGQGHCITGQGFQDQYSSEGDDEDSLSPEACYECKINGDVGKKGRHRRHA
AGDNDLKEVSMASVDTQESIPMNLSLALLLNKEPLLELLPALEPLEHHVRYVITHGNQGE
HFRLLERRDGKSVLRLGRKSPPPGSYRLEIASLPLFGPRRLRQLEEEHDSDYLLGEIGDA
LRIKLHIHLH
NT seq
8673 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagggaagctggcccggttgctgctgggatgggcggccgtttgctgggccgcg
gtccacacagcgtatggccaggcaggagcgggagatggagggtaccaagccagccgcttc
acggggaaggtggacgagagggaggtgcagagggttcgccggagaggccaggagacactc
agagggcccaatgtgtgtggctctcgcttccactcctactgttgccctggctggaagact
ctgcctggagggaaccagtgtattgtcccgatctgccgtaactcgtgcggtgatggcttc
tgttccagacccaacatgtgcacctgcggcagtggccagctctcccccagctgtggggcc
ggagccggagccggaatgcagagctgtaatgtcaggtgtatgaacggaggcagctgccaa
gaggactcctgctcctgtcagaaaggctacaccggcaaccactgtggacagcctgtgtgt
gagaatggttgccagaacggcgggcgctgcattgggcccaacagatgtgcctgtgtctac
ggcttcactgggccgcagtgcgagagagactaccggactgggccctgtttcacgcaggtc
aacaatcagatgtgccagggccagttgagtggcatcgtgtgcaccaagacattgtgctgt
gccaccatcggacgggcatggggacacccctgtgagatgtgccccgcccagcctcacccc
tgtcgccgaggcttcatccccaacatccgcagtggcgcgtgccaggatgtggatgagtgc
caggccatcccggggctgtgtgcaggaggtaattgcatcaacacagtgggctcctatgag
tgtaaatgtcctgcgggccaccgccagagtgacaccagccacaagtgtgaagatattgac
gagtgcagcactaacccaggtgtttgtgacggaggtgaatgcaccaacacagccggcagc
tacgtctgcacctgtccccgtggttacatcaccagcactgacggtgccagatgtgtagac
cagcgtgtgggcacgtgtttctcagcgctagcgagtgggcgctgtgcaggtgacctgcag
ggccagtataccaagatgcagtgctgctgtgacacgggccgctgctgggcttctggacag
atccctgagatgtgccctgtcagagggtccgatgagtacagaaggctgtgcatcgatggg
gttccccatggcacaggtaacggaggtttcccccacggagtcttccccaatggtggtggc
agcaacggtaacggttacagctacggctacaagctcaacccaaacggacctaatggcaat
ggtcaccatggcaacggaggaggaattggaggagggggacagggaggaggaggaggaaat
ggtttcggaggaaacggtggggggcgtaatatcgtatcactcaatgagaccgttgatgtg
tgtaaacatttcaccaacctgtgtttgaacggacgctgtatccccaccccgaccagctac
cgctgtgaatgtaacatgggctacagacaggatgtacgcggggagtgtatcgatgtggat
gagtgcgtcagcaacccctgtgtcaatggagactgtgtcaacacacctgggtcgtaccac
tgcaagtgtcacgaaggctaccagggcacccccaccaaacaggcctgcattgatattgac
gagtgcatcgtgaacggagtgatgtgtcgtaacggacgttgtgtcaacactggcggaagc
ttccagtgcatctgcaacgctggctttgaactcactcctgatggaaagaactgcatagat
catgatgagtgtgccaccaccaacatgtgtctcaatggaatgtgtatcaatgaggatggt
agcttcaagtgtatctgtaaatctggctttgccctggcacctaacggacgctactgcaca
gacattgatgagtgccagaccccaggcatctgtatgaacggacgctgtctcaactctgag
ggctccttccgctgtgagtgcccgccgggcctggccatcgacgtggacgggagagtgtgt
gtagacacacacatgcgcaccacctgctacggcgccatcaagatgggcacgtgctcgcgg
cccttcccgggagccgtcaccaagtccgagtgctgctgtgccagtcctgaacacggcttc
ggagagccctgcctgccctgccctgcccgcaactcagctgagttccaggccgtgtgcagc
agtgggattggcatcaccgctgacggcagagacatcaacgagtgtgccttggaccctgac
atctgtcagaacggcatgtgtgagaacctgagagggagctaccgctgcatctgtaacatc
ggctacgagtccgactccagcggaaagaactgcgtggacatcaacgagtgtctcgtgaac
cgtctgctgtgtgacaacggcctgtgtagaaacacccccggcagctacacctgctcctgt
cccaaaggcttcgtcttcaaaccagactctgagacctgcgaagatatcaacgagtgtgac
tccagcccgtgtgtcaacggaatctgccgcaacatcgccgggtccttcaactgcgagtgt
tctcacggcagcaagctggactccaccaacaccatctgcgtggacagcatgaaaggaacg
tgctggctgaatatccaagatggccgctgtgaggtcaacatcaacggcgccacactcaag
tctgagtgctgctctacgctgggagccgcctggggcagtccttgtgaacgctgcgagatc
gacactgcctgttccagagggttcgctcgtatgaagggagtcaattgtgaagacatcaat
gagtgtgaggtgttcccgggggtgtgtaccaacgggcgctgtgtcaacacccagggctcc
ttcctctgtgagtgtgctgagggtctcaccctggacgggagcggacgcacctgcgtggac
gtgcgcagcgagcagtgctacatgaagtggcacgaggatgagtgtggcgaaccgctgccc
gggcgctaccgcgtggacatgtgctgctgctcggtgggcgcggcctggggcatcgactgt
gaggagtgtcccaaggcgggaaccccggagaacaaggccatctgcccccgaggaccaggc
ttcgccaaccgaggagacatcctgactggcagacccttttacaaagatgtgaatgagtgt
aaggtgttcagcggcctgtgttctcacggaacgtgtcgcaacaccatcggcagcttcaag
tgtcgctgcagcagcggcttcgccctcaacatggaggagaggaactgcaccgatattgac
gaatgtcgtatctctccggacctgtgtggccacggcacctgtgtgaacacccccggcagc
ttcgagtgtgaatgcttcgagggctacgagagcggcttcatgatgatgaagaactgcatg
gatattgatgagtgtgagaggaacacactgctgtgtcaaggaggcgcctgtctgaacaca
gaggggagttacgagtgtgaatgtccccccggacaccagctgagccccgacggctcctcc
tgcgaagatgtgaacgagtgccagctgagcaacaacctgtgtaagaacggccactgtgtc
aacatggtggggaactaccagtgctcctgtgacacgggctaccaggttacaccagacaga
cagggctgtgtggatattgatgaatgtaccatcatgaacggcggctgtgacacacactgt
accaactcagagggcagctacgagtgcagctgtagtgagggctacgctctcatgcccgac
ctcagaacctgcgctgacattgatgagtgcgaggacagccctgatatctgtgacgggggt
cagtgtaccaacgtccccggagagtaccgctgtctctgctacgacggattcatggcctcc
atggatatgaggacctgcattgatgtgaacgagtgtgagctgaaccctaacatctgtctg
catggggactgtgagaacaccaagggatccttcatctgtcactgtcagctgggatacttt
gtcaagaagggctccaccggctgcacagatattgatgagtgtgagattggagcccataac
tgtgacatgcatgctgcctgcgtcaacgtccccggaagcttcaagtgtcgctgtcgtgac
ggctgggtgggggacggcatcaagtgtgtggacgtggatgagtgttccactgaggagcac
aactgcaacctcaacgcagactgtgtcaacaccccaggctcctaccgctgtgcctgcaag
gagggcttcaatggggatggcttctcctgttctgatatggatgagtgtgctgacaacgtg
aacctgtgtgagaacggccagtgtctgaacgctccgggtggctaccgctgcgagtgtgag
atgggcttcacccctactgaggacagcaaggcctgccaggacatcgacgagtgtaacttc
cagaacatctgtgtgtttggaacgtgtcagaacctcccggggatgttccggtgtgtgtgt
gacgacggctacgagctggaccgcagcggaggaaactgcactgacattaacgaatgtgcg
gaccctgtgaactgcatcaacggcttgtgtgtgaacacaccaggaagctacctgtgtaac
tgccctccggacttcgagctcaatccaactggagtgggctgtgtggacacacgagtgggc
aactgtttcctggacacgttggcgcgtggcgacggcggcatctcctgcagcgctgagatc
ggcgtgggcgtaacccgcgcctcctgctgctgctccctagggggagcctggggaaacccc
tgtgaactctgcccccccatcaactccacggagtacaagacactgtgtcccggaggagag
ggcttcagacctaaccccatcactgtcatcctggaagacattgatgagtgccaggagctg
ccaggcctgtgccagggtggcaactgtgtcaacaccttcggtagcttccagtgtgagtgc
cccgcaggctactacctcaacgaggagacacgcatctgcgaggatattgatgagtgcaca
gcccacattggaatctgtggccctggtacctgctacaacaccttggggaactacacctgc
gtgtgtcctcctgagtacatgcaggtcaacggaggaaacaactgcatggacatgaggaag
agcgtgtgttaccgcaacttcaacgacacgtgtgagaacgagctgtcgttcaacatgacc
aagaagatgtgctgctgtgcctacaacgtgggcaaagcctggaacaagccctgtgaagcc
tgccctacccctgtcacctcggagtaccaggtactgtgtgggaaccaggctcctgggttc
atcatagacatccacacaggcaagcccatcgatattgatgagtgtcgagagatcccgggg
atatgtgcacacggagcgtgtatcaaccagataggaagcttccgctgtgaatgtcccatg
ggcttcagctacaacaatatactgctcatctgtgaagatattgacgagtgtaacagcgga
gacaacctgtgccaacgcaacgccaactgtatcaacttcccagggagctaccgctgcgag
tgctcaccaggcttcaagctgtccccaagtggggcctgcgtggaccgcaacgagtgccag
gagatccctaacgtgtgtagccacggagagtgtatcgacacccagggcagctaccgctgt
ctctgccacaacggcttcaaggccaccgccgaccagacaatgtgcatggatatcgacgag
tgtgacagacagccgtgtgggaacggaacctgtaagaacacagtgggctcctacaactgt
ctctgcttccctggattcgagctcacgcacaacaatgactgcatggacattgatgagtgc
agtgcgttggtgggtcaggtgtgtaggaacggccagtgtatcaacagcctgggatccttc
cagtgtctctgtcaggatggctacgaactcaccccagacggaaaaaactgtgtcgatatc
aatgagtgtgtgagtcttcctggtacctgctctcctggaacctgtcagaacctggacggg
tcgttccgctgtatctgcccaactggatacgaggtccagaacgaccagtgtatagatatc
aacgagtgtgaggtggagcccaatatttgccagtttggcacgtgcaccaacaccccagga
agcttccagtgtatctgccagaatggctttgtcctgtcggacaatgggcgccgctgtttt
gataccagagagagcttctgtttcacccgcttcgagtcaggcaagtgttctgtgcccaag
gccttcaacaccaccaaggccaagtgctgctgcagcaagatgccaggcgagggctgggga
gacccgtgcgagctgtgcccacacgatagcgaggcgtcctttaaaagcctgtgtccctac
ggccatggatccctgcctggacttggggaaacccgtgaggacatgaacgagtgtctggac
aacccaggcgtctgtgtgaacggtgtctgtatcaacacggacggatcgttccgctgcgag
tgtccctttggctacaacctggactataccggggtcaactgtgttgacactgatgagtgc
tctataggaaacccctgtggtaacgggacctgtactaatgtggtgggaggctttgagtgc
tcctgtcatgaaggcttcgaacctggctccatgatgacctgtgaagatatcaacgagtgc
tctctgaaccccctgctgtgtgccttccgctgtgtcaatacttttggttcctacgagtgc
atgtgtccctcgggctacgtgctgcgagacgaccaccgcatgtgcagagaccaggatgag
tgttcggaggggctggatgactgtgagtccaagggcatgtcctgtaagaacctgattggc
actttcatgtgtatctgcccccctggcatgcagcacagacctgacggagatggctgcatg
gacctgaatgagtgtcgcgcgaagcctggcgtctgtaagaacgggcggtgtgagaacaca
gtgggcagctaccgctgtgtgtgcaacgagggcttccagcccagctccaccggaacggac
tgtatcgataaccgacagggcttctgtttcaccgaggtgcttcagactatgtgtcagcag
ggctccaccaacaggaacagtgtcaccaaatcggagtgctgctgcaatcttgggcgcggc
tggggaccccagtgtgagctctgcccactgcctggcaccgtgcagtacaagaggatgtgc
ccactgggacccgggtacaccaccgacggcagagacatcaatgagtgcacggtgatgcca
gacctgtgtaagaacggccagtgcatcaacaccatcggatcgttccgctgccactgcaac
gtgggttataccaccgacttcaccagcacctcctgcattgatatggatgagtgttccgcg
tctcccaagccctgtaacttcctgtgtaagaacacagagggcagctacctgtgctcctgc
cccagaggatacactatgcagcctgacggaaagacctgcaaagatctggatgagtgttcc
accaagcagcacaactgtcagttcctgtgtgtcaacaccatcggcggttttacctgcaag
tgtcccgcaggcttcacccagcaccaaaccgcctgcatcgacaacaatgagtgtaatggg
cagaacagtgtgtgtggctccagggcttcctgcgtcaacactcccggcagcttcaactgt
gactgtgggaaaggcttctctctggacaccactggcctggagtgtgaagatgtggatgag
tgtggcagtaaccatcgctgtcagcacggctgtcagaacatgatgggagggttccgctgt
ggctgtcctcagggctatgtacaacactaccagtggaaccagtgtgtggatgagaatgag
tgttcgggtgcatctgtgtgtggctcggcctcctgctacaacaccctgggcagctttaag
tgtttgtgtccgtccggctttgactttgaacagggagggggcggctgccaggatgtcaat
gagtgttccatgggcagtaacccctgcagcttcggctgctccaacacagacggaggatac
ctgtgtggctgtcctggaggttactacagggctggacagggtcattgtataacgggccag
ggcttccaggaccagtatagctcagagggagacgatgaggacagtctgtctccagaggcc
tgctacgaatgtaagatcaacggagacgtcggcaagaagggacgacacagacgtcacgct
gctggggacaacgacctcaaggaggtgagcatggccagcgtggacacccaggagtccatc
cctatgaacctgagcctggccttgctgctcaacaaggagcccctgctggagctgctgccg
gccctggagcccctggagcaccatgtgcgctacgtcatcacccacggcaaccagggcgag
cactttcgcctgctggagcgccgcgacgggaaaagcgtgctgaggttgggcaggaagtcg
cctccccctggctcctaccgcctggagatcgctagtctgcccctgttcgggccgcggcgc
ctccgacagctggaggaggaacacgacagcgactacctgctgggagagataggagacgcc
ctgcgcatcaagctgcacatccacctgcactga
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