Oncorhynchus mykiss (rainbow trout): 110524230
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Entry
110524230 CDS
T07259
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110524230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110524230
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
hnRNP proteins
110524230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RBD_DEAH11
HnRNP_M_NLS
RRM_MARF1
RRM_10
RRM_5
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
110524230
NCBI-ProteinID:
XP_021459361
Ensembl:
ENSOMYG00000010314
LinkDB
All DBs
Position
5:complement(60915017..60930663)
Genome browser
AA seq
666 aa
AA seq
DB search
MSTEAAATEKPGQGEMNGKSKHEPNTRKERPQKRGGGRFEPYGNPSKRYRVFVSNIPYDV
KWQALKDLMKEKVGEVTYVEHLMDGEGKSRGCAIVEFRTEELMKKAVEKVNKHNLNGRPL
KVKEDPDGVIAQRDSHRAQGGGGGPPGGHGGMNMGMGMDHMNMERMNMDCMGPGPGGPPM
VNIPPSLMNNSNIPNEIIHGLQAGKIGSTVFVANLDYKVGWKKLKEVFGMAGVVVRTDIL
EDKDGNSRGMGTVTFDMPIEAVQAVSMFNGQLLFNRVMHVKLDEKSLPKGDFAPQERPPA
LPRGLSGIGQGLGPGGQPIDATALNRGGGGMGNMGPGGMDGMGFGGGMGRMGGMDNFGGG
MNNMERYGPSGMGRMNEMDRGIGGAFDRECGRNEMGMSRNNFGESFDRGMGSSLGMDRMS
SGMDRLGGGMDRLGGMERMDRVSDLDRLGGSGFDRMGSGLDRLGPSMDRLGSGLDRMSSS
MDRLGPAGFDCLGPSSLDRMSAGLDFTSPMGMADRMNTGMERMGTNFDRMGSAGMDRFPT
TGLDRMGSTMDHMGAASVGGQYDRPAEMERGGFGGNGFGGPGANARKGCQIFVRNLPYDF
TWKVLKDTFNTCGIVQYADIKTENGKSKGCGVVRFDNPETAERACHTMNGYRLNGREIDV
RIDRNA
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgaggccgctgctacggagaaaccaggccagggggaaatgaacggcaagtcc
aagcatgaacccaataccaggaaggagaggccccagaagcgtggaggtggtcgctttgag
ccctatggaaacccatcaaagagataccgtgtgtttgtcagcaacatcccatacgatgtg
aaatggcaggcactcaaagatctaatgaaagaaaaagtgggtgaggtaacgtacgtggaa
cacttaatggacggagaaggcaaatcaaggggttgtgcgattgttgagttcaggactgag
gagctgatgaagaaggctgtggagaaggtcaacaagcacaacctgaatggtcggcccctg
aaggttaaagaggacccagatggtgtgattgcccagagggattcacacagggcccagggt
ggtggtggtggccccccaggcggccatggtggaatgaacatggggatggggatggatcac
atgaatatggagcggatgaacatggactgcatgggcccaggaccgggcggcccacccatg
gtcaacattccccccagcctcatgaacaactctaacatccccaatgagattattcacggg
ctgcaggctggcaagatcggaagcacggtcttcgtagctaacctggactacaaggttggc
tggaagaagctgaaggaggtgtttggcatggcaggagtggtggtgcgtactgacatcttg
gaggacaaggatgggaatagcaggggcatgggaactgtcacctttgacatgcctattgaa
gctgtccaagccgtcagcatgttcaacggtcaactactgttcaaccgggtcatgcatgtc
aaactggatgagaagtccttaccaaaaggagactttgcaccacaggagagacccccagca
ctaccccgtggcctgagtggcattgggcagggactggggcctggtggccaacccattgac
gccaccgcactgaacagaggtggtggaggaatgggcaacatgggacctgggggcatggat
ggcatgggcttcggtggtggcatgggtagaatgggaggcatggataactttggcggagga
atgaataacatggagcgctatggaccatcaggaatgggacgtatgaatgagatggaccgt
gggattggtggtgcttttgaccgggagtgtggtcgaaatgaaatgggcatgtctcgcaat
aattttggagagtcctttgatagaggaatgggtagctcactgggcatggaccgcatgagc
tctggcatggatcgcctgggtggtggaatggaccgtctgggtgggatggagaggatggac
cgcgtgtctgatctggacaggctggggggctctggctttgaccgtatgggctctgggctg
gaccggctgggtcccagtatggacagacttggttctggcctggatcgtatgagctccagc
atggaccgcctgggcccagctgggtttgactgcctaggcccatccagtttagaccgcatg
tccgccggcctggacttcacctcccccatgggcatggcggaccgcatgaacaccggcatg
gagaggatgggaaccaactttgaccgcatggggtctgctggcatggaccgcttcccgacc
accgggctggaccgcatgggctccaccatggaccacatgggcgctgcaagtgttggaggc
cagtatgaccggcctgctgagatggaacgtgggggctttggaggaaatggctttggaggt
cctggggccaatgccaggaagggctgtcagatctttgtccggaatctgccatatgacttc
acctggaaggtgctgaaggatactttcaatacatgcggtatcgtccaatatgctgacatc
aagacggagaatggcaagtccaagggctgtggcgtggttcgcttcgacaacccggagact
gccgagagagcctgtcacaccatgaatggctacaggctgaatggaagagagattgacgtc
agaattgacagaaatgcctaa
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