Oncorhynchus mykiss (rainbow trout): 110524243
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Entry
110524243 CDS
T07259
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110524243
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110524243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Motif
Other DBs
NCBI-GeneID:
110524243
NCBI-ProteinID:
XP_021459385
Ensembl:
ENSOMYG00000011414
UniProt:
A0A8C7Q4M8
LinkDB
All DBs
Position
5:complement(61139319..61242006)
Genome browser
AA seq
1523 aa
AA seq
DB search
MPTLPSPSLAMDGENYLHPEGPQLNSSMFEVASSNMESSMYPSASWGSFSQQSGGYSAHC
PMQSGNQQYHLNDTMPDMHIDMFSHSGFHDDFPCLNLPRNGGFPQDLSCIDDLSNNSLFS
SPADSLSEYADAQDFIHADNLAHVPTLWDINTPAQSQLELNANRFQGLSSLEDISAIIST
PPLGGYQVQRTQTPAEEEEEEEETEELGHVDTYADYKPSKSTIGISHPDIVVETNTLSSV
PPPDITYTLSIPNLTINCGLLSALQLEAIIYACQQHEVILQNNQRAGFLIGDGAGVGKGR
TVAGIILENYLKGRKKALWFSVSNDLKYDAERDLKDINAPTIPVHALNKIKYGDTATSEG
VLFATYSALIGESQAGGQRRTRLKQILDWCKPGFDGVIVFDECHKAKNATSTKMGKAVLD
LQHKLPLARVVYASATGASEPKNMIYMSRLGIWGDGTPFKTFDDFLHAIEKRGVGAMEIV
AMDMKVSGMYIARQLSFSGVSFRIEEISLDDDFKLVYNKSAKLWAETLAVFMRAADELCL
VSRKSLWGQFWSSHQRFFKYLCIAAKVRCLVELANKELEAGKCIVIGLQSTGEARTREVL
DENDGHLDRFVSAAEGVFKALVQKHFPSEKPRREKAPGNKRKRKPRGRQPKFPKHTMVDP
GGVINISDDSSTDTDGMDTDSNSSPDSLLDNNNDDDVIFVDTRIEEMKQDLLNKIADLGK
ELPLNTLDELIDKLGGPEKVSEMTGRKGRVVRRPDGSVRYESRAEQSHTIDHINLKEKDR
FMCGEKLVAIISEAASSGISLQADKRVKNQCRRVHMTLELPWSADRAIQQFGRTHRSNQV
TAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTKALD
KITKAILGHIESKVSPPKGYPGGDSLFFRDMKHGMMDVGIFCKEPRFGLSTEKDCSITKF
LNRILGLEVHKQNSLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGNDEIYEEKQETFMT
VGNPQDGQVVLYKISVDRGMPWEEAYEKAQNLNSPDEGFYLSYKLRGNHPCVLLAEQGRG
RNFIVYKPNIGKQAHPESLDNLQQRYRKVTPDQAKDSWESQFNFSFGKCSHANWNGKCKK
IEEGQECLQGMRLRQYHMLCGALLRVWKRVADVVSDITSSSILQIVRLKTKNSNKQVGIK
IPENCVARVRVELLKMDEEVKRRRKEREQHAQEQRLAEQRQLQDIHLLAKPYSQPHSQSQ
SHRTQNFYQSLIQAKPLQVKPLLQPKPQPSPINQLPSMASIFSHFPHHFPSLPPMQPAPT
STTKPFRVGEEVLDLTVSSSPSPDSTEGVLGLISLTGGSDFDLERLISRHALAAQNTAHI
LQQPLQPPLIKQRQLQSPQQIQPQLQQWSDQPLINSAHQDYYILDHPDSLPYSLSSQTAT
NPSTSSTSSSSSNTVAHVSSPSTPSHFSSSALAPSEQQPLPLANSHCSTDTLINAREVLD
NMMRTSVDRQSVIQYQPNEWDSA
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgcccacactcccgtcaccctcactggccatggacggggagaactacctgcacccagag
gggccgcagctgaacagcagcatgttcgaagtggcctcttccaatatggagagttctatg
tatccttctgcttcctggggatcattctcacagcagtctggaggctacagcgcacactgc
cctatgcaatctggaaaccagcaataccacttgaatgacaccatgccggatatgcacatc
gacatgttcagccattctgggttccatgacgatttcccctgcctcaacctccccagaaac
ggaggcttccctcaggacctgtcctgcatcgatgacctctccaacaactctctgttctcc
tctccggccgactctctgtcagagtacgccgatgcccaggacttcatacacgcagacaac
ctggcccacgtgcctacactatgggacataaacacaccagcacaaagccagctggagcta
aatgccaacaggtttcagggtttgagcagtttggaggatatctctgccattatcagcacc
ccacctttgggaggataccaggttcagagaacccagactccggcagaagaggaggaggag
gaggaggagacagaggagctgggacacgtagacacttacgccgactacaaaccatccaaa
tctaccatagggatctcccacccagacatagtggtggagaccaacacgctgtccagcgtc
cctcctcctgacatcacctacactctatccattcctaacctcaccatcaactgtggcctg
ctctctgccctgcaactcgaggccatcatctacgcctgccagcaacatgaggtgatcctg
cagaacaaccagagagcaggcttcctgataggagacggggccggagtggggaagggccgt
acggtggccggcatcatcctggagaattaccttaaaggaaggaagaaagcactatggttc
agtgtgtccaatgacctgaaatacgacgcagagagagatctcaaagacataaatgctccc
actattcctgtgcatgccttaaacaagataaagtatggcgacacagctacctcagaagga
gtcctgtttgcgacatactctgctctgattggtgagagtcaagcaggagggcagcgccgc
accagactcaagcagatcctggactggtgcaagcccggctttgacggcgtcattgtgttt
gacgaatgccacaaggccaagaatgccacgtccaccaagatgggcaaggccgtgctggac
ctgcagcacaagctgcccctggccagggtggtttatgccagtgccacaggtgcctctgag
ccaaagaacatgatttatatgagccgcctggggatctggggcgacggcacgcctttcaag
acctttgatgatttcctgcacgccatcgagaagaggggtgtgggcgccatggagattgtt
gcaatggacatgaaggtgagtgggatgtacatcgcccggcagctgagcttctcaggggtg
tccttccgcatcgaagaaatcagcctggacgatgacttcaaactggtctacaacaaatct
gccaaactgtgggcggagactctggccgtgttcatgcgtgcagcggatgagctgtgcttg
gtcagcaggaagtccctgtggggtcagttctggtcttctcaccagcgcttcttcaaatac
ctctgcatcgccgccaaggtccgctgcctggtggagctggccaataaggagctggaggct
ggcaagtgcattgtgattggtctacagtctacaggagaggcccgaaccagagaggtcctg
gatgagaatgatggacacctggacagattcgtatccgcagcagagggggtgttcaaagct
ctggtacagaaacactttccctctgagaagccgaggagagagaaagcgcctggaaacaag
agaaaacgtaagcccaggggccggcagcccaagttcccaaagcacaccatggtggatccg
gggggtgtaatcaacatcagtgacgacagcagcacggacacggacggcatggacaccgac
tccaactcctcacccgactccctgctggacaacaacaacgacgacgacgtcatcttcgtc
gacaccaggatagaggagatgaagcaggacctcctgaacaagatcgctgacctggggaag
gagctacctctgaacactctggatgaactcatcgacaagttgggaggtccagagaaagtc
tcggagatgactggtcgtaaggggcgtgtggtgcgacggcctgacgggagcgtgcgctac
gagtcgcgtgcggagcagagccataccatcgaccacatcaaccttaaggagaaggaccgc
ttcatgtgcggagagaagctggtggccatcatctcagaggcggccagctcgggcatctcc
ctgcaggcagacaagcgggtgaagaaccagtgtcggagggtccacatgacgctggagctg
ccctggagtgcagacagagccattcagcagtttggtcgtacccatcgctccaaccaggtg
acggctccagagtacatcttcctcatctctgagctggccggggagagacgctttgcctcc
atcgtggccaagagactggagagcctgggtgcattgacccacggtgacaggagagccaca
gagtccagagacctgagcaaatacaactttgaaaacaagtatggtaccaaggctctagat
aagatcaccaaagccatcctgggtcacattgagagcaaggtgtcccctcccaaaggctac
cccgggggcgattccctgttcttcagagacatgaagcatggcatgatggacgtgggcatc
ttctgcaaggagcctcgctttggtctcagtactgagaaagactgcagcatcaccaagttc
ctcaacaggatcctgggcctggaggtccacaagcagaactctctgttccagtacttcact
gacaactttgactacctgatcgaaaaggacaagaaggagggcaaatacgacatgggcatc
ttagatctggccccaggtaacgatgaaatctatgaggagaaacaggaaaccttcatgaca
gtgggtaacccccaggacggacaggttgtgctctacaagatcagcgtggatagagggatg
ccctgggaggaggcctacgagaaggcccagaacctcaacagtcctgacgaaggcttctac
ctctcctacaagttgcgggggaaccacccttgtgtgctgctggcggagcagggccgaggg
aggaacttcatcgtctacaagcccaacatcggcaagcaggcccaccctgagagcctggac
aacctgcagcaacgctaccgcaaggtgaccccagaccaagccaaggacagctgggagagc
cagttcaatttctcctttgggaaatgtagccatgctaactggaacgggaagtgtaagaag
atcgaggagggacaggagtgtctgcagggtatgcgtctgcgccagtaccacatgctgtgc
ggggcgctgctgcgtgtctggaagcgcgtggctgacgtggtctctgacatcaccagctcc
agcatcctgcaaattgtacgcctcaaaaccaaaaatagtaacaagcaagtcggtatcaag
atcccagaaaactgcgtggcccgtgtgcgagtggagcttctcaaaatggatgaggaggta
aagaggaggcgcaaggagagggagcagcatgcccaggagcagaggctagccgagcagcgg
cagcttcaggacatacacctgcttgccaagccctacagccagccccacagccagtctcag
agccacaggactcagaacttctaccagagcctgatccaggccaagcctttacaggtcaag
cctctactacagcccaaaccccagcccagcccgatcaaccagctccccagcatggccagc
atcttctcccacttcccccaccacttcccctccctgcccccaatgcagcccgctccaacc
tccaccaccaagcccttccgggttggggaggaggtcctggacctgacggtgagctcctct
ccctccccagacagcacggagggagtcctgggcctgatcagcctgacagggggctccgac
tttgacctggagagactgatatcgcggcacgcactcgccgcccagaacacagcacacatt
ctgcagcaacctctacagccaccgctgatcaaacagcggcagctacagtcgccacagcag
atacaaccacagctacagcagtggtcagatcagcctttaatcaacagcgcccaccaggac
tactatatccttgaccatccagactctctgccttactctctgtccagccagacagctact
aacccctcgacctcttctacctcctcctcttcctccaacacagtggctcatgtctcgtcc
ccctccaccccctctcacttctcctcctcggcccttgccccctcagaacagcagcccctc
cctctagccaacagccactgcagcacggacacactcatcaacgcgcgcgaggtcctggac
aacatgatgcggaccagtgtggaccgccagtcggttatccagtaccagccgaacgaatgg
gactctgcgtaa
DBGET
integrated database retrieval system
