Oncorhynchus mykiss (rainbow trout): 110524253
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Entry
110524253 CDS
T07259
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110524253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110524253
03036 Chromosome and associated proteins [BR:
omy03036
]
110524253
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110524253
Coactivators
SAGA/TFTC/STAGA complex
110524253
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
110524253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
110524253
NCBI-ProteinID:
XP_036835028
Ensembl:
ENSOMYG00000017384
UniProt:
A0A8C7QJ74
LinkDB
All DBs
Position
1:48256867..48289561
Genome browser
AA seq
1004 aa
AA seq
DB search
MAGASDPLEDMLFNEVDEKAVSDLVGSLESQLVSQKTSPATFSDIKREGSTGTVSQFSGK
VRDQVGSLEPPQQGHPKAVLNAELCANQAISNKSITASTSSITAGGIINAGTNLQTHGAA
SLIISPAPPGSVTLPAQTTSYNRGTVLGPAETSAVTAPNSNLTTTTAIRTPSPGLQSFNG
SPGAVKLVNSPAASPQIGLGGNTVISTASAGNSNIIVSMASQPPSLPNYPVSQSAVAFVT
PTVALQRHPNPMASASQNGVIDPKVSAVVTQGAGSPGATTSQVMNRNNTLINTTMVAPNQ
PVSAGQSIILGGSPSPVVVNSPISQAQSVASPTLAAGVKPTVNGVGQPTVTIVRPPGAPV
MATSVQQQRPGLVASPTRTVAPQMVVRPPQQTTIQLPPGFTIPPGMVLVRTDTGQLVMVP
QQVLAQAQAKTQQGQAAVSNICPRPATPTAGTTIRVSTPSQAPCTTQAVRLASPVQARML
QSPSPTSSAIQKAITVAPAGASVSVKMTTPQKAQTVITGGQALAKPGAVRPSITLNTAAS
ASASTTPTMVTAPVSQEMQENVKKCKNFLSTLIKLASHNSPSPDTSKNVKGLVQDLLDAK
IEPEEFTTRLQAELKSSPQPYLIPFLKKSLPALRLSLLNNQQTLLASTNASALAAASTTT
TSAIRARLPTTVSPATGIVRTPTTSLGVRRPGVQGVQTRMPMVIPQTIRPQGTVARGLTI
IAGRSPVGIGAQASANQKKLNEPGGGTFRDDDDINDVASMAGVNLNEENARIMATNSELV
GTKIRSCRDEAFLPPGLLHRRIMETAKRFGVTEVPAEAVNYISHATQARLRSVLEKVSTI
AQHRTDGGKDEEWYEPSTDVRAQLRFFEQLDRMEKQRKDEQEREVLLKAAKSRARQEDPE
QARLKAKAKEMQQAEQAQIRQREANLTALAAIGPRKKRKMDSPGSSTSGTEVALGSGAGS
STAASSRQQLRQRITRVNLRDFIFCLEQERVTSRSLLLYKALLK
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgacccactggaggacatgctcttcaatgaggtagacgaaaaagca
gtaagtgacttagttggctctttggaatcgcaacttgtcagccaaaagacttcgcccgcc
acattttccgatatcaagcgagaaggatctacgggtactgtcagccagttctcagggaaa
gtgcgtgatcaagtggggtctctggagccgccacaacaaggacacccaaaagcggtgtta
aacgcggaactctgcgcgaatcaggcgatttcgaataagagtatcaccgcttctacctct
tccatcactgctgggggcattataaacgctggtaccaatttacaaacacatggagccgca
tctctcataatttcccccgcaccaccaggatcggtaactttgcctgctcagacgactagc
tacaacagagggactgttttgggtccagctgaaacatcggcggtgactgctccgaactca
aacctcacaacaacaacggctatcaggactccttcacctggattacagagttttaacggt
agccccggagctgtgaagttggtcaactcgccagctgcttctccccaaatcgggttaggc
ggcaacactgttataagtactgccagtgcgggcaactcaaatatcattgtgtctatggct
tcacagcctccttctctaccaaactatcctgtatctcaatctgctgtggcatttgttact
cccactgttgcattgcaaaggcatcccaaccccatggccagtgcctcacagaatggagta
atagaccctaaggtttctgcagtggtcacacagggtgcaggttctccgggggccaccacc
tctcaggtcatgaaccgcaataacactcttattaacactacaatggtggcacccaaccag
ccagtctctgctggccaatcaatcattctcggagggtctccctctcctgttgttgtgaac
tcacccataagccaggcacagagtgtggcgagtcccactctcgcagccggtgtgaaacca
acggttaacggagttggtcagcccacggtgaccatcgtgaggccccccggtgctcctgtg
atggccacctccgtgcagcagcagagacctgggctggtagcgagtcccacgaggactgtg
gcaccacagatggtcgtcagaccaccacagcagaccaccattcagttaccccctggattt
accatacctcccggtatggtgctggtgcgtacagacacaggccagctggtaatggttcct
cagcaggttctagcccaggctcaggctaagacccaacaaggccaggctgctgtctctaac
atctgcccccggcctgctacacctaccgctgggaccaccatcagagtcagtactcccagc
caggccccttgtacaacccaggctgttcgtctggcctcccctgtccaggccagaatgttg
cagtccccctctcccaccagctctgctatacagaaggcgataaccgtggctcctgcaggt
gcgtctgtgtcggtgaagatgaccacccctcagaaagcccagacagtgatcacagggggc
caagccctggccaagcctggtgctgtacggccctctataacccttaacactgcagcatca
gccagtgcctccacaacccctacaatggtaactgcaccagtctcccaggaaatgcaagaa
aatgtgaagaagtgcaagaacttcctgtccaccctgatcaagctggcgtcccacaactcc
ccatctccagacacatccaagaacgtcaagggcctggtgcaggatcttctggatgctaaa
atcgagcctgaggagttcaccacacgtctgcaggctgagctgaagtcctctccccagccg
tacctcatccccttcctcaagaaaagccttcctgccctgcggctgtccctgctcaacaac
cagcagactctgttggcctccaccaacgcttctgccctggccgctgcctccactactacc
accagcgctatcagggcccggctccccaccaccgtcagccccgccacaggcattgtcagg
acacccaccacttctctgggtgtgagaagaccaggggttcagggggtccagactcgcatg
ccgatggtcatccctcagaccatccggccacaaggcacagttgcaagaggactcactatt
attgcaggcagatctcctgtgggcattggtgcccaggcctctgccaatcagaagaagctg
aatgagcctggaggcgggacgttcagagatgatgatgacatcaacgacgtggcgtccatg
gcgggggtgaacctgaacgaggagaacgcccgcatcatggccaccaactctgagctggtg
ggcaccaagatccgctcctgtagggacgaggccttcctcccgccaggcctgttgcacaga
cgcatcatggagaccgccaagaggtttggggtgacagaggtcccagctgaggcagtgaac
tacatctcccatgccacccaggccaggctgagatccgtgctagagaaagtgtcaactatc
gcccagcaccgcactgacgggggcaaggatgaggagtggtatgagccgtcgacagacgtc
agggcccagctccgcttctttgagcagctggacaggatggagaaacagaggaaggacgag
caggagagggaggtcctactcaaggctgccaagagtcgcgccaggcaggaggacccagag
caagctcggttgaaggcgaaagctaaagagatgcagcaggcggagcaggcccagatccgg
cagcgtgaagccaacctcactgccctggctgccatcggtccccgcaagaaacgcaagatg
gactcgccagggagctccacatcgggcacagaggttgctttgggttcaggggctggctct
tccacagccgcctcctcccgccaacagctccgtcagcggatcacgcgagtcaatctcagg
gactttatcttctgcctggagcaggagagggtcacatcccggtccttactgctctataag
gctctcctgaagtag
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integrated database retrieval system
