Oncorhynchus mykiss (rainbow trout): 110524289
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Entry
110524289 CDS
T07259
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
110524289 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110524289 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
omy04131
]
110524289 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
omy03029
]
110524289 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110524289 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
110524289 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
110524289 (si:dkey-110c1.10)
Membrane trafficking [BR:
omy04131
]
Others
Actin-binding proteins
Myosins
110524289 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
omy03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
110524289 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
110524289 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
110524289
NCBI-ProteinID:
XP_036833944
LinkDB
All DBs
Position
5:complement(63380799..63402249)
Genome browser
AA seq
1685 aa
AA seq
DB search
MIGTMELYAKGASVWVPDPEAVWVSAKLLKDYNLGDENVVLQISDGREVQYPVAPPSGLP
PLANPDILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVALNPYDQLPIYG
EEVIDAYSGQDMADMEPHIFSVAEEAYRTMTREEKNQSIIISGESGAGKTVSAKFTMRYF
AVVGGAAQQTSVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFGRKGDIIGANMR
TYLLEKSRVVFQASQERNYHIFYQLCASRDLPEMRVLKLGGAETFRYTNQGGEDSMQIPG
TDDVVDLERTRNAFTILGVPPDQQMELFRILAAVLHLGNVNIQASGRGGDRSYIDGEERS
LSVFSKLLGVERTQMAHWLCHRRLTVGGEMLVKPMPGQQSLEARDALAKHVYGQLFTWTV
TRLNSALRAQSEKPKSFIGVLDIYGFETFERNSFEQFCINYANEKLQQQFNRHVFQLEQE
EYVREELPWNRIEFSDNQPCIALIEGQLGLLDLLDEECRMPKGSEESWARKLYDQHQSNN
PSPHFRKPRMSNTAFIILHFADMVQYECDGFLDKNRDTVFEEPINILRASQSELVSELFQ
QKPVGGSLSLSEGKSSLPNGSLRSGPGMRAQREHKLTVGFQFRQSLQLLMDTLNSTTPHY
IRCIKPNDLKEPFMFDPKRAVQQLRACGVLETIRISAAGYPSRWTYAEFFSRYRVLLRGG
GVQTQEQIQASCQRALPELIPDPEQYCFGKTKVFFRAGQVALLERLRAERLRAAGVIIQS
WVRGWLGRRRYIKTRWATLTIQRYTRGALARRLADLLRYTKAALIIQKTYRMVAIRQMFL
MIREATVTIQAFTRGSLARRQYRRVVAERAAVLLQSAVRGWLARLAYRRVRAAIVLMQCC
VRRRAARRELLKLKAEARSVEKFRELNKGMEVKLMQLQLRADQKARESGALRETLQAERK
AHNTELDTLRGALVKLEYQLETQLQTQQSQPSTAITEEETEERRRAEEKAAQEILRLTHE
VQALRVERDCLGKEKEDLTTRLLEQETAQEESVVQAVAQEGKALTAELDEERRKYQGLLR
EFTRLEQRYENLREMSMLTEHSKGYRRTDSNQSLIMEPPSPSPMSSPFSGPPTFPATPSF
FGLPPFPSPEEVRRVSVTSPTAERRAWLSSDTLMDTLMENMGVAKDSAGKMTGEDLWHAY
DAVRVANKFLENQLRSQRSQEEAELEALRLQAKRTCSDPSPSADQQYLVELVEAREQEVC
RLRRELKELRHTVTLRRLLAQTGPVLSQSTEDSSAPHAKAGTVTGLLECRKRDEAKLMKT
LITDVRVDSALSLPPGLAASVLFLCVRQADCSGDEIRARSLCTAAVTAMKGALKKHCNDV
DMTALWLKNACLLNDLLTQHSKQDEDLVPLTSDLSELNRALSALCIQAYQQLLSISETRL
QPIIVPAMLESEMIPGLSGSGVKLGNFRKRAGSDPRAVERNAGETPSMAAVLRELSALHT
AMSRQALPPTLMEQAFRQLTHLLSASALNSLLLRKDMCSWSRGLQIRYNVSLLEEWLRTR
GLQAGGAVALLEPLIQAAQLLQVGKKTEADAQALVHTCTALSTQQIVKILTLYTPHSDLE
ERVTLNFIRTVQGLLKERSGGQPPQLLMDVRRVFPVTFPYLLPPPVRADQLDIPDSLKIS
FLRRP
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgattggaactatggagttgtacgccaagggtgccagtgtgtgggtacctgacccagag
gcagtgtgggtatcagccaagctcctcaaggactacaaccttggagatgagaatgtggtg
ctgcagatcagcgatggcagggaggtgcagtacccagtggcgccaccctctggcctcccc
cctctggcgaaccctgatattctggagggggagaatgacctcactgctctcagcttcctg
cacgagcctgctgttctacacaacctgagagtccgattcctggactacagcagcatctac
acctactgtgggattgtgttggtggccctcaacccatatgaccagctgcccatctatgga
gaggaagtgatcgatgcctacagtgggcaggacatggctgacatggagcctcacatcttc
tctgtggcagaagaggcctaccgcaccatgaccagggaggagaagaaccagtccattata
atcagtggggaatctggagcagggaaaacagtctctgctaagttcaccatgcgctacttt
gctgtggtggggggagcagcccagcagaccagtgtggaggagagagtactggcctccaac
cccatcatggagtccattgggaatgctaagactacacgcaatgacaacagtagccggttt
gggaagtacattgagatcggcttcggacggaagggggacatcattggggccaacatgagg
acgtacctgctggagaagtctcgagtcgtcttccaggcgtcacaggagagaaactaccac
atcttctaccagctgtgtgcttctagagacctgccagagatgagagtcctcaaactgggt
ggtgcggaaacgttccgctacacgaaccaaggaggggaagactccatgcagatcccaggc
actgatgatgtagtagatctggagcgcactcgcaatgctttcaccattctaggtgtgcct
ccggaccagcagatggagctcttcaggatccttgcagctgttctgcacctgggcaatgtc
aacatccaggccagtgggagaggtggtgatcgaagttacattgatggggaggagcgttcc
ctgtcggtgttctccaagctgctgggggtggagaggacacagatggcccactggctgtgc
caccgcaggctgacagtagggggagagatgctggtcaagcccatgcctggtcagcagtcc
ctagaggcccgggatgccctggccaagcatgtgtacggtcagctgttcacctggacagtg
acccggctcaactcagcccttcgagcccagagcgagaagcccaagtcatttattggggtg
ctggacatctatgggtttgagacgtttgaaaggaacagttttgaacagttctgtataaat
tacgccaatgagaaattgcagcagcaattcaacaggcacgtgttccagttggagcaggag
gagtatgtccgtgaggagctgccgtggaacaggatagagtttagtgataaccagccgtgc
atcgctctcatcgagggacagctgggcctgctcgacctgctggatgaggagtgcaggatg
cccaaaggttcagaggagagctgggctaggaagctgtatgatcagcatcagagtaacaac
cccagtccacacttccgcaaacctcgaatgtccaacactgccttcatcatcctgcacttt
gctgacatggtccaatatgaatgtgatgggtttttagacaagaaccgggatacagttttt
gaggaacccatcaacatcctaagagccagccagtctgagctggtgtctgagctgttccag
cagaagccagtagggggcagtctgtccctctcagaggggaagtcctctctgcccaatggc
agtctgcgctctggccctgggatgagagctcagcgggaacacaaactcactgtgggcttc
cagttccgtcagtctctgcagctgctgatggacactctgaacagcaccaccccccactac
atccgctgtattaagcccaatgacctcaaagagccttttatgtttgaccctaaaagggcc
gtccagcagctgcgagcctgtggggtgctagagaccatacgcatcagtgctgcaggctac
ccatccaggtggacctatgcagagttcttcagccggtaccgggttctgctgcgcgggggt
ggggttcagactcaggaacagatccaggcgtcgtgccagagggccctgccggagctcatt
ccagacccggagcagtattgctttgggaagaccaaggtgttcttccgtgctgggcaggtg
gctctgctggagagactgagggcagagagactgagggcagccggggtgatcatccagagc
tgggtcagaggctggctgggccgcaggcgatacatcaagacacgctgggcaacactcacc
atccagagatacacaagaggagccctggctagacggctggcagaccttctgcgctacacc
aaggcagcgctgatcatccagaagacataccgtatggtggcgataagacagatgtttctg
atgatccgtgaggccaccgtcaccatccaggctttcaccaggggctcgctggcacgacgc
caatacagacgggtggtggcagagcgggctgcggtgttgctccagtctgcagtgcgtggc
tggctggcccgccttgcttacaggagggtgagggccgccatagtgttgatgcagtgttgt
gtgaggcggcgggctgccaggagggagctgctgaagctgaaggcagaggctcgctcggtg
gagaagttcagagaactcaacaagggcatggaggtcaaactgatgcagctgcagctcagg
gccgaccagaaggccagggagagcggtgctctgagagagaccctccaggcggagcgtaag
gcccacaacactgagctggacaccctgcggggggcgctagttaagctggagtaccagtta
gagacccagctccagactcagcagtctcagcccagcaccgccatcacagaggaggagacg
gaggagaggaggagggcagaggagaaagcagcccaggagatcctacgactcacacatgag
gtgcaggccctgcgggttgagagggactgtttggggaaagagaaggaggatctgaccact
cgcttactggagcaggagacagctcaggaggagagtgtagtacaggctgtagcccaggaa
ggtaaagctctgacagcagagctggatgaggagaggaggaagtaccagggtctgctcaga
gagttcaccaggctggagcagagatacgaaaacctacgggaaatgagcatgctcactgag
cactctaagggctacagacggacagattcaaaccaaagcctgatcatggagcccccatct
ccttccccgatgtcgtcgcccttttctgggccccctaccttcccagccacaccttccttc
ttcggcctccctcccttcccctctccggaggaggtgaggagggttagtgtgacgtccccc
accgcagagaggagggcctggcttagctctgacacactcatggacactttgatggagaat
atgggtgtggctaaagactcagccgggaagatgactggagaagacctgtggcacgcctat
gatgctgtacgagtggccaacaagttcctggagaaccagctgcgtagccagcgctctcag
gaggaggcggagctggaggctctgcggctgcaggctaaacggacgtgctctgatccctcc
ccctctgcagaccagcagtacctggtggaactggtggaagccagggagcaggaggtctgc
agactgaggagagaactgaaggagctgagacacacagtcacactcagaagactactggca
cagacaggcccagtgctttcccagtccacagaggattcctctgccccccatgccaaagct
gggactgtcacagggctgctggagtgtaggaagagggatgaggccaagctcatgaagacc
ctcatcacagacgtgagggtggacagtgccctctccctgccccctggcctggctgctagt
gtgctgttcctgtgtgtacgccaggcagactgtagcggagacgaaatccgcgcccgctct
ctctgcactgctgctgtcactgccatgaagggggctctgaaaaaacactgtaatgatgtg
gacatgacagcactgtggctgaaaaatgcctgccttctcaatgacctactgacccagcac
tccaaacaggatgaggatttggttcctttgacctctgacctgagtgagttaaaccgtgct
ctgagtgccctctgtatccaggcctatcagcagctcctgtccatctcagaaacccgcctg
cagcccatcattgttcctgccatgctggagagtgagatgatcccaggactgtctgggtcg
ggggtgaagctggggaactttaggaagcgtgcggggtctgatcccagggccgtagagagg
aatgcaggggagacccctagtatggctgcagtgctgagggagctgagtgccctccacacg
gccatgtcccgccaggccctaccccccaccctgatggagcaggccttccgtcagctcacc
cacctcctttctgcctctgccctcaacagcctgctgctacgcaaggacatgtgtagctgg
agccgcggcttgcagatacggtataatgtgagtctgctggaggagtggctgcggacccgt
gggctgcaggcagggggagctgtggccctgttggagcctctcatccaggccgctcagctc
ctgcaagtgggcaagaagacagaggctgacgcacaggccctcgttcacacctgcactgcc
ctgtctacccagcagattgtaaagattctgaccctgtacacccctcacagtgacctagag
gagagggtgacactcaattttatccgcacagtgcagggtctgctgaaggagcgttcaggc
ggtcagcctccacagctgctgatggatgtacggcgtgtgttccccgtcaccttcccctac
ctgctgcccccgcctgtccgcgctgaccagctggacatcccagactccctcaaaatctcc
ttcctacgacggccttag
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integrated database retrieval system
