Oncorhynchus mykiss (rainbow trout): 110524321
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Entry
110524321 CDS
T07259
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110524321 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110524321 (nup160)
03036 Chromosome and associated proteins [BR:
omy03036
]
110524321 (nup160)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110524321 (nup160)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110524321 (nup160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_1
TPR_2
RMD1-3
Motif
Other DBs
NCBI-GeneID:
110524321
NCBI-ProteinID:
XP_036835079
Ensembl:
ENSOMYG00000020618
UniProt:
A0A8C7VT45
LinkDB
All DBs
Position
1:complement(48598178..48623416)
Genome browser
AA seq
1391 aa
AA seq
DB search
MAAVLERSFIEICGFERETLPRFREITVNLGLNALPGGVKYPDSAGGFHYEESGKLLSIT
SNRCIHWSTSGDTVQLVEQSLDTNLLNNAVKLKITHCHLLPGGVHIQETLNNVIILIVTN
QTVHRLVLPHPTRMYRSELVTELQMQSIFTDVGKLSLQDPAHSAAIPSPVGQTAGPSASA
AWLSHQGEAHYALASPAGGILVITLPPHDTQGSITILELKRSSVMQRLAGWMPTAIRGEQ
SPGDLALSLAVRELEDDTFIFALCQDHKLRMWSYRDQVCLMETDMLEYMPACRGVKGSPG
QGHRLRLAFSPSTGLCLAVYLAVPSRGQFTVLQLVATDNNRYSLDHISSLFATQETLVDF
ALTSTDIWGLWLDDTNQTVVKYINFEHSTAGQWNQVFVQPAPEEEVHIGADQDPRETYLD
MLFSPLRFTASAIVKALQIYRRGTERIADLPWETLKKEVTVAVENELQSSVTEFEFSQEE
YRQLQVEFWSKFYACCLQYQEALATPLGLLLNPHTHMVCLLKKGFVSFLLPCFAVDHMYL
SFDEYLFSEEDTPVSEDPEVARDVMQLVQCLRLVSDAVPGDMAYEMEKALEHLQSPERAA
EMVLENLLANDNENVIEDIQNKLQDIRNPVSAMAALIREMDLETDSEPGGEGPLTTAGLS
VRISLSQLYGSSVAVAVICQAVCQMAMTRVLFCRDLLILQQLYLRLGDNVFLAGGDQLLQ
LQQDLIPRSSHLLSSYYLLKHISQSLATAVPLDIIDANLQHLSVLELSDSPALASNRSVL
SPQTVVELFYQSVARKAIVTQIYSQQQSTALLHWPQMVSSVVTLLAQQLWPNNPGFQFPE
CLMGNCQYTQLQEYVRLIGPWCQVNVGSCRFMLGQCYLANGEGQKALQCFQEAATEVEKE
EFLLRLTGAEEEEVTAASRLQYYNKVLRLLEDVGLPELVIHLATLAITEAVNDPRSQAAL
WTRIFKHHLDLGHNSQAYEALTQNPDSSRQLDCLRQLVVVLCERSQLQDLVQFSYVNLHD
EVVGIIESRARAVDLMSHNYYELLYAFHINRHNYRKAGTVMFEYGMRLGREVRTQLGLQK
QVNCYLASLNCLRLIRPDYAWIVQPSSGAVYERPGASPKRNYDGEFATGPVSGQIDILEL
KDLQKEYTLARSRLNLAQHHPPSAAIAGSASAVEMVSLLVQTGLFDCALSLCQTFKLSLT
PIFEGLAFKCIKLQYGGEESQNEAWNWLAANQLSTIITTKESSATDEAWRLLASYLEKHP
TQNAQHHRCVINKLLSHGVPLPDWMVNTYKGVDAAALLRLYLNYDLLEEAAELVLEYVDA
LLGKGHQYFGIERPLSATASLVWLPYTSIDQLLQALNETQTNASIYNKLQDKLNDYHKLV
DQTTRRRLQAQ
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtcttggaaaggagttttatagagatatgtggatttgagagggaaacccta
ccaagattccgggagataactgtaaacctcggtctgaatgctcttcctggcggtgtaaaa
tacccggacagtgcaggaggctttcattatgaggagagtggaaaactcctgtccatcaca
agcaacagatgcatacactggtccacctctggggacacagttcagctggtggagcagtct
ctggacaccaacctactgaacaatgctgttaaactcaagatcacacactgccacctgctg
cctggaggtgtccacatccaggagaccctcaacaatgtcatcatcctcattgtcaccaat
cagaccgtgcaccggctggtgctgccacaccccacacgcatgtaccgcagtgagctggtg
accgagctccagatgcagtctatcttcacagacgtggggaagctgagtcttcaggaccca
gcccacagcgcggcgatccccagccccgtaggccagacagcaggcccctccgcctcggca
gcctggctcagccaccagggagaggcccactatgccctggcatcacctgctgggggcatc
ctggtcatcacactgcccccacatgacacacagggtagcataaccattctggagctgaag
aggagctctgtaatgcagagactcgctggctggatgccaactgcaatcagaggtgagcag
agtcctggagacttggccctgagtctggcagtaagggaactggaggacgacaccttcata
ttcgctctgtgtcaggaccataaactacgcatgtggtcctatagggaccaggtgtgtctg
atggagactgacatgttggagtacatgccagcgtgccgtggcgtgaagggttccccaggg
cagggccatcggctgcggctagccttctccccctctacggggctgtgtctggccgtatac
ctggctgtaccttccaggggacagttcactgttctgcagctggtggccacggacaacaat
cgctacagcctggaccacatctcctctctttttgccacacaggagacactggtggacttt
gctctgacctcaacggacatctggggcctgtggcttgacgataccaaccagaccgtggtg
aaatacatcaactttgaacattccacggcaggtcagtggaaccaggtttttgtgcagcct
gcccccgaggaggaggtccacatcggcgcagaccaggaccccagggagacctacctggac
atgctgttctcccccctgagattcactgcctctgctatagtcaaagccttacagatttac
aggagaggcacagagcgaatcgctgacctcccctgggagaccctcaagaaagaagtgacg
gtggcggtggagaacgagctgcagagcagtgtgacagagtttgagtttagccaggaggag
tacaggcagctgcaagtggagttctggtctaaattctacgcctgctgtctgcagtaccag
gaggctctggccactccgctcggcctactgctcaacccacacacacacatggtctgtttg
ctcaagaagggctttgtgtcattcctgctgccctgctttgctgtggaccacatgtacctg
tcctttgacgagtacctgttctcagaggaggatacgcctgtcagtgaagacccagaagtt
gctcgtgacgtgatgcagctggtgcagtgtctgaggctggtgagtgacgcggttccgggg
gacatggcctatgagatggagaaggccctggaacatttacagtcacctgagagggctgca
gagatggtgctggagaacctactggccaatgacaatgagaatgtgatcgaggacattcag
aacaagctgcaggacatccgtaacccggtgtcggccatggctgcactgatcagagagatg
gacctggagacggactccgagccaggaggagagggacctctcaccacagcaggcctgtca
gtgcgtattagtctgtcccaactgtatggcagcagtgtggcagtggctgttatctgtcag
gctgtctgccagatggccatgaccagagtcctgttctgtagggacctactcatactgcag
cagctctacctacgcctcggagacaatgtgttcctggctggaggggatcagctgctccag
ctacaacaggacctaatcccccgctcctctcacctgctctcctcctactatctcctcaaa
cacatcagccagagcctggccactgccgtgcccctcgacattatagatgccaacctgcag
cacctttcagtcttagagctgtctgattctccagccctggccagcaacagatcagtgttg
agccctcagacggtggtggagctgttctaccagagcgtagcgcggaaggccatcgtcacc
cagatctactcccagcagcagagcacggctctactccactggccccaaatggtctccagc
gtggtcaccttgctggctcagcaactttggcctaacaatccaggcttccagttccctgaa
tgtctgatgggcaactgccagtacacacaactgcaggagtatgtgcgtctcattgggccc
tggtgtcaggtgaacgtgggctcctgccgcttcatgctgggccagtgttacctggccaac
ggagagggacagaaggcactgcagtgttttcaggaggcagcgacagaggtggagaaagag
gagtttctgctgagattgacaggagctgaggaggaggaggtcacagccgcctcaagacta
cagtactacaacaaggtgttgcgattactggaggatgttggtctaccagagctggtcatc
catctagccactctggccataacggaggccgtcaacgaccccaggagtcaggctgccctg
tggacccgcatcttcaagcaccacctggacctgggacacaacagccaagcctacgaagcc
ctcacacagaaccctgactccagcaggcagttggactgtctgcgtcagctggtggtggtt
ctttgtgaacgctctcaacttcaggatctggtccagttctcctacgtcaacctgcacgac
gaggtggtcggcatcatagagtccagggccagagcagtggacctgatgtctcacaactac
tacgagctgctctacgccttccacatcaacagacacaactacaggaaagcgggtacagtg
atgtttgagtacggcatgcgtctgggcagggaggtgaggacccagctaggtctccagaaa
caggttaactgttacctggcctccctcaactgtctacgactcatcagacctgactacgcc
tggatcgtacagccgtcctctggcgcggtgtatgagaggcctggcgcgtcaccgaagagg
aactacgacggagagtttgctactggtccagtgagtggtcagatcgacatcctggagctg
aaggaccttcagaaggagtacaccctggcccgtagccgcctcaacctggctcagcaccac
ccgccgtccgctgccatcgcaggcagtgcctctgcagtagagatggtgtccctgctggtt
caaacaggactgtttgactgtgccctctcactatgccagaccttcaaactgtccctcaca
cccatcttcgaggggctcgccttcaagtgtataaagttacagtacggtggagaggagagt
cagaatgaagcctggaactggctggctgccaatcagctgtctaccatcatcacaaccaaa
gagtcaagtgcgacagatgaggcttggcgcctgctggcctcctacctggagaagcacccc
acacagaatgctcagcaccatcgctgtgtcatcaacaagctgctgtcacacggtgtacca
ttgccggactggatggtcaacacctacaagggcgtggacgctgcagcgttgttacggctc
tacctgaactatgacctgctggaggaagcagctgagctggtgttggagtacgtagatgct
ctcctggggaagggacaccagtacttcggcattgagaggcccctctctgctacagcatca
ttggtgtggctcccatacacttccatcgaccagcttcttcaggcgctcaacgagacccag
actaatgccagtatatacaacaaactgcaggacaagctgaatgactaccacaaactggtg
gaccagacaacaaggcgaagactccaggcccagtag
DBGET
integrated database retrieval system
