Oncorhynchus mykiss (rainbow trout): 110524358
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Entry
110524358 CDS
T07259
Symbol
notch2
Name
(RefSeq) neurogenic locus notch homolog protein 2
KO
K20994
Notch 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110524358 (notch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
EGF_3
Ank_4
EGF_Teneurin
EGF_DL_JAG
JAG1-like_EGF2
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
110524358
NCBI-ProteinID:
XP_036833997
Ensembl:
ENSOMYG00000002728
UniProt:
A0A8C7LWW3
LinkDB
All DBs
Position
5:65604119..65661449
Genome browser
AA seq
2488 aa
AA seq
DB search
MGQLPGFASDKVLVFVVCCIRLSLALQCLDAVKPCVNNATCATFTNGTGYCRCAAGFLGE
YCHHKDPCHPGYCLNGGNCSVAVLGIPGSPTCSCPLGYTGQHCQTPQNSTCYPNNPCANR
GVCTLLSLDKYKCQCAHGWTGIRCERVDTCLPGPCANGGTCSSLSGDKFSCTCPPGYWGP
RCLNDTDECAASAPVCQNQGACVNTPGSYRCNCAPGFTGRHCETPYIPCAPSPCLNGGTC
RQTSETSYWCHCLPGFNGTNCDNNIDDCPDHHCRNGGTCMDGVNTYNCKCPPEWTGQSCT
EDVDECRLQPNTCQNGGTCSNIQGSYTCVCVNGWSGLDCSENIDDCATAACTKGSTCIDR
VASFLCVCPYGKTGLLCHVNDACISSPCRDGAQCDTNPINGMFNCNCAPGYKGSTCNDDI
NECIIGPNPCEHGGLCVNTDGSFTCNCARGYGGPRCETDINECVSSPCQNDGTCLDRIGD
YSCICMEGFEGTHCEIDINECASSPCLNQGICLDQVKRYVCQCPLGFSGEMCQIDIDECS
STPCLNGAKCIDRPNGYECECAEGFYGPLCKENIDDCDPEPCHHGVCRDGIATFSCDCDP
GYTGSICNIQVMECHSLPCQNRGRCIDLVNKYQCNCLPGTSGVNCEINVDDCASNPCEYG
ECQDGINEYKCVCAPGYTGAKCDVDINECNSSPCMSGGTCVDKVNGFICQCPPGTHGPLC
HSGTDHCAPRPCVHGDCVEQQSGYHCECESGWVGQHCDQEKDECQSSPCQHSGSCVDRLN
GYSCQCRPGFTGVNCEVNIEECASSPCENHGTCVDGVNSYTCLCAAPYSGKHCEEELVPC
ASHPCERGGVCQPTPDYTFYTCRCPSGWQGPRCTEDVDECRKNPCQNSARCINSQGSYVC
KCQPGYSGLNCQTNIDDCSPNPCLNGGSCVDGVGGFSCDCRPGFDGERCEAEMDECASQP
CRNGAVCRDYVNSFVCECRPGFDGILCEHNIPECTESSCLNNGTCVDDINTFSCRCRPGF
YGTFCQYEQNECDSQPCKNGGTCTDGLGSYRCTCPVGYNGQNCQNFVNLCSQPLCRNGGS
CSQSQTTWSCHCPVGWTGLYCDVPNMSCQDYAARNGIPVEMVCKHMGRCVNVGNAHQCQC
QPGYTGSYCDKTVDECQSNPCRNGATCMDYQGTYECMCKAGYQGVNCEYDVDECHSNPCR
HGGTCINLINRFSCACPPGTHGVQCEVNMDDCAPKPGSWGPRCLNGGQCMDGVGRYTCSC
PPGFAGEHCEGDVNECLSGPCHSPGSLDCVQLANDYQCRCRLGYTGRLCESMVDLCQSKP
CHNSGTCSMNMSSVHGYSCTCQPSFTGFNCGEVEGYNCAQLRCQNGGHCQDSQGGQLHCR
CQPGFSGSRCETVHSCQNRPCLNGGTCMKDPHNPYQYSCRCPAHFSGRHCENAIFDQTPR
TPSCPYVECEQRSGDKVCDPQCNNHECQWDGGDCSLHWRRPWVNCTASVPCWELFRNGRC
DHECDNSGCLFDSFECQESTKSYCKYDDYCADHYANKICDKSCNTEACGWDGLDCSEDTP
AKVVDGTLVIVVLLQPEELLGDVRGFLRSLGTLLHTNLRVKMDAQQKLMVYPYYGLEHDN
TIEGQSATMKRRGKRELDKEVIGSKVYLEIDNRECAESSMDCFSSTELAASFIAAEYLKS
ALPYPVVSVDSDHMDPQKPPFMLYLAVGAAVIILLILVLGVLAAKRKRKHGILWLPDGFL
AKKDDKRREPLGQDDFGMKNFKTQDGGMMDGGQRWMEEEAPPKKSRTEDKPLLPLGVDGG
VDRREWTLQHHKAADISLTPPQADLEADCLDVNVKGPDGFTPLMLASLRNGGASDCGLQA
EEEEESGGDEPGPNVISDLITQGATLIAQTDRTGETALHLAARYARADAAKRLLDAGADA
NAHDNMGRTPLHAAVAADAQGVFQILIRNRATELDARMNDGTTPLILAARLAVEGMVEEL
VHCHADINAVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAAREGSF
EAAQVLLDHYSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHNGPNHMGGGVG
HSLVCGGNGAGYMGMRPGPQGKKSRRGGVKVGGPGGGTAKELKDMKAKRRKKPTGGEGPA
VGAVGGASGNGTKAAGGLSESSVTMSPVDSLESPHSYTGDAAVASNTANSPPLLSSPSSR
PLLPPVSHMLGQQQSWLGLKHGYGGHMFSLLPQQMGNGHSGISQHHGQGLLTPMNVTMSR
EQLPPIVTFQMMAPGGGQSLLKQPQPGQVQSQGQNQGQPRSQQGPTHLHCTQGMMYQMPG
VGLQHSLSHSLPHSHGLAHSHGMVHDGQSRQQLPPYQAIQSPVDKYPTPPSQHSYATAGS
EGTTPGHPAHPPSEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSPTPLGNPHALPPPRH
THIPEQPQSQQTQQNPQQPQHGNMQVFV
NT seq
7467 nt
NT seq
+upstream
nt +downstream
nt
atgggccaattacccggttttgcttcggacaaagtattagtcttcgtcgtctgctgcatt
cggctttctttggctcttcagtgtctggatgctgttaagccgtgtgtgaacaatgctacg
tgtgccaccttcaccaacgggacagggtactgcaggtgtgccgcaggcttcctgggtgag
tactgccatcacaaagacccgtgtcatcctggttactgtctgaatggagggaactgctca
gtggctgtgttgggcatcccgggcagccccacctgctcctgtcccctgggctacaccggg
cagcactgtcagaccccccagaactccacctgctatcccaacaacccttgtgccaacaga
ggagtctgcaccttgctctccctcgacaagtacaagtgccagtgtgctcacggatggaca
ggcatacgatgtgagcgtgtggacacctgtctaccaggaccctgtgctaacggaggcacc
tgcagctctctgtccggggacaagttcagctgtacctgtcctccaggctactggggtcct
cgctgcctcaacgacactgacgagtgtgctgcctctgccccggtgtgtcagaaccaaggg
gcgtgtgtcaacacccccggctcctacaggtgtaactgcgcccccgggttcaccggccgc
cactgtgagaccccctacatcccctgcgccccctcgccctgcctcaatgggggcacgtgt
cgccagacttctgagaccagctactggtgccactgcctgccaggtttcaatgggactaac
tgtgacaacaacattgacgactgccccgaccatcactgccggaatggagggacctgcatg
gatggcgtcaatacctacaattgcaaatgtcccccggaatggactggtcagtcctgtaca
gaggatgtggatgagtgtcgcctgcagcccaacacgtgtcagaacggggggacctgcagc
aacatccagggcagctacacctgtgtgtgtgtcaatggctggagtggcctggactgctct
gagaacatagatgactgtgctacggctgcctgcaccaagggctccacctgtatcgaccgt
gtggcatccttcctctgtgtctgcccctacggaaagacaggtttgctgtgccacgtgaac
gatgcctgcatcagtagcccgtgcagggacggggcacagtgcgacaccaaccccatcaac
ggcatgttcaactgcaactgtgccccaggctacaagggaagcacctgcaatgacgacatc
aacgagtgcatcattggtccaaacccctgtgagcatggaggattgtgtgtgaacacggat
ggctcgttcacatgtaactgtgcaagaggttatggtgggccgcgctgtgagacagacatc
aatgagtgtgtctccagcccctgccagaacgatggcacctgtctggaccgcataggagac
tacagctgcatctgtatggaaggatttgagggaacacactgtgagattgacatcaacgag
tgtgccagctctccatgtctgaaccaagggatctgtctggatcaagtcaaacgctacgtc
tgccagtgccctctaggattcagtggggagatgtgtcagatcgacattgacgagtgttcc
agcacgccctgcctcaacggggccaagtgtatcgaccgacccaacggatacgagtgtgaa
tgtgctgaaggcttctatgggccactgtgtaaagagaacatagatgactgtgacccggag
ccctgccaccatggtgtgtgtcgtgatggcatcgccaccttctcctgtgactgcgacccg
ggctacaccggctccatatgtaacatccaggtcatggagtgccacagcctcccctgccag
aaccgcggacgctgcatcgacctggtcaacaagtaccagtgcaactgtctgcctggcacc
tcaggggtgaactgtgagatcaatgttgatgactgcgccagtaacccctgtgagtatgga
gagtgccaggatgggatcaacgagtacaaatgtgtctgtgctccagggtacacaggtgca
aaatgtgacgtggacatcaatgagtgtaattccagcccgtgtatgagtgggggcacatgt
gtagacaaggtgaacggcttcatctgccagtgcccccctggcacccacggccccctgtgc
cactctggcaccgaccactgtgccccccggccctgtgtgcacggagactgtgtagagcag
cagagcgggtaccattgtgagtgtgagtctggctgggtggggcagcactgtgaccaggag
aaggatgagtgtcagtccagcccctgccagcacagtggcagctgtgtggacagactcaat
ggatactcctgccagtgtcgccccggattcacaggtgtgaattgcgaggtcaacatagag
gagtgtgcatcaagcccgtgtgagaaccatggtacctgtgtggacggagtcaacagctac
acctgcctgtgtgccgctccgtactcaggaaaacactgcgaggaggagttggttccctgt
gcgtctcatccatgtgagcggggaggtgtgtgtcagccaaccccagactacaccttttac
acctgtagatgtcccagtggctggcaaggccctcgttgcactgaggatgtggatgagtgc
aggaagaacccgtgtcagaacagcgcccgttgcatcaacagccagggcagctacgtgtgc
aagtgtcagccaggctacagcggtctcaactgccaaaccaacatcgatgactgctccccc
aacccgtgtctgaacggcggttcctgtgtggatggagtgggagggttctcctgtgactgc
cggccagggtttgatggggagcgctgtgaggcagagatggatgagtgtgccagtcagccg
tgccggaacggagccgtgtgccgggactacgtcaacagctttgtctgcgagtgccggcca
ggtttcgacggaatcctatgtgaacacaacatcccagaatgcactgagagttcctgtctg
aataacgggacctgtgttgacgacatcaacaccttctcgtgtcgttgtcgtcctggtttc
tacgggaccttctgtcagtatgagcagaatgagtgtgactctcagccctgtaagaacgga
gggacctgtacagacggcctaggatcctaccgttgcacctgccctgtgggctacaacggg
cagaactgccagaactttgtgaacttgtgtagccagccactgtgcaggaacggagggtcc
tgttcccagtcacagactacctggtcatgtcactgtcctgtgggctggactggtctgtac
tgtgatgtccccaacatgtcctgtcaggactatgctgctcggaatggtattccagtggag
atggtgtgtaagcacatgggtcgctgtgtgaacgtcggtaatgcccaccagtgtcagtgc
cagcctggctacacaggcagctactgtgacaagactgtggacgagtgccagtctaacccc
tgccgcaacggagccacctgcatggactaccagggcacatatgagtgtatgtgcaaggct
ggctaccagggggtgaactgtgagtatgacgtagatgagtgtcactctaacccttgtcgt
catggaggaacctgcatcaacctcatcaaccgcttctcctgcgcctgcccacctggtaca
catggtgttcagtgtgaggtgaacatggacgactgtgctcccaagcctggctcctggggg
cctcgctgtctgaacgggggccagtgtatggatggggtgggccgctacacctgctcctgc
ccccctggcttcgctggggaacactgtgagggggacgtcaacgagtgtctctctggaccc
tgtcactctcctggcagcctggactgtgtgcagctggccaacgactaccagtgccgctgt
cgcctgggctacaccggacgcctctgtgagtccatggtggatctgtgccagtctaagccg
tgccataacagtggcacctgttccatgaacatgagctcagtgcatggatactcatgcacc
tgtcaaccaagtttcactggcttcaactgtggagaggtagagggctacaactgtgcccag
ctgcgttgtcagaacggcgggcactgccaggattctcagggtggtcagctgcactgccgt
tgccagccaggctttagtgggtcgcgctgcgagaccgtgcacagctgccagaaccgaccc
tgtttgaatggaggcacctgtatgaaggacccacacaacccataccagtacagctgtcgc
tgcccagcccacttctcaggcaggcactgtgagaatgccatcttcgaccagaccccccgc
accccctcctgcccttatgtagagtgtgagcagcggtccggggataaggtgtgtgacccg
cagtgcaacaaccatgagtgccagtgggacggaggggactgttctctacattggcgccgg
ccatgggtcaactgcaccgcctccgtgccctgctgggagctgttccgcaacggccgctgt
gaccacgagtgtgacaactctggctgcctcttcgacagctttgagtgtcaagagagcaca
aagtcctactgcaagtatgatgactactgtgcggaccactatgccaacaagatctgtgac
aagagctgtaacacagaggcatgtggctgggatggcctggactgctctgaggacacccct
gctaaggtggttgatggcactctggtgatcgtagtgttactgcagcctgaggagctgctg
ggagacgtgagaggcttcctgcgctccctgggaactctgctgcacaccaacctccgtgtt
aagatggacgcccagcagaaactcatggtgtatccttactatggcctggagcatgacaac
accattgaaggacagtctgctacaatgaaacgtagaggcaaacgggagctggacaaggag
gttatcgggtctaaggtttacctggagatcgataaccgagagtgtgctgagagctccatg
gactgtttctccagcacagagctggctgcatccttcatcgctgcagagtacctgaagtct
gcgctgccctaccctgtggtctctgtcgacagtgaccatatggacccccagaagcccccc
ttcatgctgtacctggctgtgggagcagctgtcatcatcctgctcatcctggtgctgggt
gtcctggccgccaagaggaaacgcaaacacggcatcctctggctccccgatggcttcctg
gccaagaaagacgacaagaggagggagcccctgggtcaggacgacttcggcatgaagaac
ttcaagacccaggatggagggatgatggatggaggccagagatggatggaagaggaggct
ccgcccaagaaatcaaggactgaggacaagcccctgctgccactgggtgtggatggagga
gtggaccgacgggagtggactttacagcaccacaaggctgctgacatctctctcactcca
ccacaggctgatctggaagcagactgccttgatgttaatgtcaaaggaccagatggcttt
acccccctgatgctggcttctctacgaaacggaggggcatctgattgcggcctgcaggca
gaggaggaagaggagagtgggggagatgagccgggacccaacgtcatctcagacctcatc
acccagggtgcaacactcatagcccagacagatcgcaccggggagacggcactccacctg
gctgctcgctacgcccgggccgatgccgccaaaaggctgctggatgccggggcagatgcc
aatgctcacgacaacatgggtcgcacacctctccacgctgctgtggcagccgatgcccag
ggagtgttccagatcctgatccgtaaccgggccaccgagttggatgccaggatgaacgat
ggaaccacacctctgatcctggctgccaggctggctgtggagggcatggtggaggaactg
gtccactgccacgcggacatcaatgctgtcgacgaccacggtaagtctgctctgcactgg
gcagctgctgtgaacaatgtggaggccaccctagtgctgctgaagaatggagccaacaga
gacatgcaggacaacaaggaggagaccccattgttcctggcagccagggagggtagtttt
gaggcggcccaggttctgctggaccactactctaatagggacatcacagaccacctggac
cggctgccccgtgacaccgcgcaggagcgcatgcaccatgacattgttcgtctgctcgat
cagtacaacctggtccacagccctcacaacggccccaaccacatgggcgggggagtggga
cactccctggtctgtgggggcaacggagcgggctacatgggcatgcggcccgggccccag
ggcaagaagagcaggcggggcggggtgaaggttggaggtcctggcggaggtacagccaaa
gagctgaaagacatgaaggctaagcggaggaagaagccaacaggaggagaagggcctgca
gtgggagctgttggaggagccagtggcaacggcactaaagctgcaggagggctgtcagag
agctcagtcaccatgtctcctgtggactccctggagtctccacactcatacacaggagat
gctgccgtggcatccaacacagccaactctcctcctctcctgagcagcccctcctctagg
cccctgctgcctcccgtcagccacatgctgggccaacagcagagctggctgggtttgaag
catggatacggcggccacatgttcagcctccttccccagcagatgggtaacggccattct
ggtatttcccagcaccacggccaaggcctgctcacccccatgaatgtcaccatgagccga
gagcagctgcctcccatcgttaccttccagatgatggcaccggggggcgggcagtccctg
ctgaagcagccccagcctgggcaggtgcagtcacaggggcaaaaccagggccagccccgc
tctcagcagggccctactcacctgcactgcacccagggcatgatgtaccagatgcccggc
gtgggcctccagcacagcctgtcccacagccttccccactctcatggcctggcccacagc
cacggcatggtgcatgacggccagtcccgccagcagctccctccatatcaggctatccag
agccccgtggataagtaccccacccctccctctcagcacagctacgccaccgctggctcg
gagggcaccaccccggggcacccggctcacccgcccagtgagcacccgtacctcaccccc
tcccccgagtcccctgacccctggtcctcttcctccccccactccaactcagactggtct
gacgtcaccaccagccccacccccctggggaaccctcatgcactgccgcctccccgccac
acacatattccggagcagccacagtcccagcagacgcaacagaacccccagcagcctcag
catggcaacatgcaggtgtttgtatag
DBGET
integrated database retrieval system
