Oncorhynchus mykiss (rainbow trout): 110524379
Help
Entry
110524379 CDS
T07259
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110524379 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omy03009
]
110524379 (rexo1)
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
Pre-60S particles
RNases
110524379 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
REX3_middle
Motif
Other DBs
NCBI-GeneID:
110524379
NCBI-ProteinID:
XP_021459642
Ensembl:
ENSOMYG00000011649
UniProt:
A0A8C7VGV0
LinkDB
All DBs
Position
5:66401096..66412427
Genome browser
AA seq
1313 aa
AA seq
DB search
MLRSTGFFRGIDCPFYTDSCNGISGKYGCNRPYCHFRHSKHRRASYGSNDTRTSKELYSK
QKEQGGYDPFNPEVVRPEEQQNGEPAAATVDMGALELELVNRAIEAVRSEVEREKKKLSQ
IGDLEYDPSASSPKVLLKPLSQTGDQKYDPTASSPKLVPKPPSRFGDQEYDPTASSPKVM
ANWPKPQAVASHLAYDPGSYQMTTTADYNPTPRSSKYTLDSDSKDNHASSMEYVPTSVTK
TALKKPAPRTRSPHLPSPPTSPKYSNNAAFSKNKYTVDNSKPSTDMEYDPLSNYSAKIAV
KDKKDQRTGASKGEVKKRPHLSGTEKLSTDEEYVPTTKKPRQVIPDPLKYTVSFSESDEE
SSGTEYRPTSLSRLQRRKSSSGSVEETSGPGKGERTERTLGGLKQQRSREAKEQEDSENQ
QVARQKVKPETEKVPGKTSHTKIIKVEKVHKSEKESSKKSGSSKEKGAGDGKKISDSKTS
SHETAKKDSKNQGKKEEEKSKIKDKSIDKGKEGQEEKRSDGKSKLRTDKVKGASSKSERE
KGGGDSKKLKTSDKEKDSSKFKEHKNGKHDSSGRERGFNKVSKGSSNSSKDKVKKNSRSF
LDGKTGKVKQRSLSHVDLFGDESAEEKREEDDEEEKIVRKSAAAFKRGHLNKRNASELTP
SSSEDDDVGPEDDRGYDDMDGGGVDYSGLQMDMDFDLDEDPMEECLRIFNESKDVKTEDK
GRQAKPSKDSDDEDATDSNQTTLFPGQKKRVSHFSAKGSTEATPKPPSYRRLTAQEICYQ
RMQIAQQQASQLAAAVKTASTPRPRPSLSPFPGERKRVAHRPTPLPSSSKSGVVEAKLAG
SRVLSPTRTLPGGVSVKAQTSAGILSKTTTTIAQKRVAHTPTMKSSAMKRPVIPTEFGAK
VPTNVRQRYLNNFIDECMKFCPSEDLAFQMALEEEKVVYDRSSSKNIYLNVAVNTLKKLR
SKSSSPTSPVARSPAVVGNRKAQSHEEVLGGRLAAKTSFTINRTGKQQEEKLSGVRLYRK
LRDYLMTEEQLQEHGYPRPHPERSGRAVVHNVPEKKNVDPFAKVCCRCGAEYKINANGNC
VRKEECNHHWGRLRRHKVSGGWETNYSCCSGTVGSPGCSVSKQHVQDGRKESLDGYVQTF
EKQLPPDGNGGVYALDCEMCYTKQGLELTRVTVINSELKVIYDTFVKPESKVVDYNTRFS
GVTEEDLENATITLRDVQAVILNMFSTESILIGHSLESDLFALKVIHSTVVDTAIVFPHR
LGLPYKRALRNLMADHLKRIIQDSVEGHDSSEDACACMELMIWKIREDAKVKR
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgctgagatccaccggtttcttccgtggaattgactgcccgttttacacggatagctgc
aatgggataagcggcaaatatgggtgcaacagaccatactgccacttcagacacagcaaa
catagacgtgcgtcttatggctcaaatgacactagaacatcaaaagaactttactccaaa
caaaaggagcaaggtggctatgacccattcaacccagaggtagtaagaccagaggagcaa
cagaatggggagcctgctgctgcaacagtggacatgggtgccctcgagcttgagttggtc
aatcgtgccatcgaggcggtacgcagtgaggtggagcgggaaaagaagaagctctcccaa
atcggggacctggaatatgacccttctgccagttctcctaaagtgttgctgaaaccactc
tcacaaactggagaccagaaatatgaccctactgccagttcccccaagctggtgccaaaa
ccaccatcacgatttggggaccaggaatatgatcctactgccagttcccccaaagtgatg
gctaactggccaaaaccacaagccgtggcatcccacttggcgtatgacccaggcagttat
cagatgactacaacagctgattataatcccacccctcgctccagtaagtacaccttggac
tctgacagcaaggacaaccatgccagctccatggaatatgtgcccacctcggttaccaaa
acagctttgaagaagcctgctcctcgaacacgatctcctcatctaccctctccccctact
agtcctaagtactccaataatgcggccttctccaagaacaagtacacagtggataattct
aaaccatccacagacatggaatatgaccctctctccaactattcagctaaaattgctgtc
aaggataagaaagaccagaggacaggtgcttctaagggagaagtgaaaaaaagacctcac
ctgtcagggacagaaaagctgtcaacggatgaggaatatgtgccaaccactaagaagcct
cgacaggtgataccagacccactgaagtacactgtcagtttctctgagtctgatgaggag
agctctgggacagagtatcgacccacctctctcagccgtctgcagaggaggaagagtagc
agtgggtcagtggaggaaacctctggtccagggaaaggagagaggactgaaagaactcta
ggtgggctgaaacaacagaggagtcgggaggctaaagagcaggaagactcggagaaccag
caagtagcaaggcaaaaagtcaaaccagaaactgaaaaagtgccaggtaaaaccagccac
acgaagatcatcaaagtagagaaggtgcataaatctgaaaaggagtccagtaaaaagagt
ggtagtagtaaagaaaaaggagcaggggacggtaagaaaataagtgattcaaagacatca
agccacgaaactgcaaagaaggacagcaagaatcagggaaagaaagaagaggagaaaagc
aagataaaggataaatccatagacaaaggcaaggagggacaggaagaaaagagaagtgat
ggaaagagtaagctaaggacagacaaagtaaaaggggcgtcaagcaagagtgagagagaa
aaggggggtggggatagtaaaaaactgaagacttcagacaaggaaaaggactcttcaaag
tttaaagaacacaagaatggtaaacatgacagcagtggaagagaaaggggcttcaataaa
gttagcaaagggagttctaacagcagtaaagacaaggtgaagaaaaacagcagaagcttc
ttggatggcaaaacaggaaaggtgaaacaaagatctctgagtcacgtagatctgtttggg
gatgagagtgcagaggagaaacgcgaggaggatgacgaggaggaaaaaattgtgaggaag
tcagctgctgctttcaagagggggcatttgaataagaggaatgcctcagagctcaccccc
tcatcctcagaggatgatgacgttggtccagaggatgacagaggctatgatgacatggat
ggtggtggggtggactactccggtctgcagatggacatggactttgacctggatgaagac
ccaatggaggagtgcttacggatcttcaatgaatccaaggatgtgaagacagaggacaag
ggaaggcaagccaagccctctaaagattctgatgatgaggatgccacagacagcaatcaa
actactctctttcctgggcagaagaagagggtttcacatttctccgccaaaggaagtact
gaggcaacaccaaagcctccatcgtacaggagactgactgcccaggagatctgttaccag
cgcatgcagattgcccagcagcaggcctctcagcttgcagcagccgtgaagactgcctct
acacccagacccaggccaagcctcagccccttccctggggagaggaagagagtagcccac
cgccccacccccttaccatcctcctccaagtctggtgttgtcgaggcaaagctagcaggc
agcagagtgttgtcgcccaccaggactctcccaggtggtgtctctgtgaaggcccagaca
tcagccggcatcttgtcaaagaccaccaccactattgcacagaagagggtggcacacact
cccacaatgaagagctctgcaatgaagcgcccagtgattcccactgagtttggagccaaa
gtgcccaccaacgtccgccagcgatacctcaacaactttatagatgagtgtatgaagttc
tgcccctctgaagacttggccttccaaatggccctggaggaagagaaggtggtgtatgac
cggagcagcagtaagaacatctacctcaacgtggcagtcaacacactgaagaagctacgc
agcaagagcagctcccccacctcacccgttgccaggagccctgcagtggtggggaacagg
aaggcccagtcccatgaggaagtgctggggggacgcctcgctgccaagaccagcttcacc
atcaacaggactggcaagcaacaggaggagaaactcagtggtgtcaggctgtacaggaag
ctgagggactatctgatgacggaggagcagctgcaggagcatggataccccaggccacac
cctgagcgctcaggtcgagccgtggtccacaacgtcccggaaaagaagaatgttgaccct
tttgccaaggtgtgctgtcgatgtggggccgagtataagatcaacgccaacggcaactgt
gttcgcaaggaggagtgtaatcatcactggggccgtctgcgcagacataaagtgtcggga
ggctgggagaccaactacagctgctgctcagggactgtgggctctcctggctgctctgtg
tctaagcaacacgttcaggacggacgcaaagaatcattggacggctatgttcagaccttt
gagaaacagctgcccccagacggcaacggtggagtctacgccctggactgtgagatgtgt
tacacaaagcaaggtctggagctgaccagggtgactgttatcaactctgagctgaaagtc
atctatgacacatttgtcaaacccgaaagcaaagtggttgactacaacacacggttttcg
ggtgtaacagaggaggacctggagaatgcgaccatcaccctgagagacgtgcaggctgtg
atcctcaacatgttcagcactgagtccatcctcataggacacagcctggagagtgacctc
tttgccctcaaggtcatacacagcactgtagtggacacagccattgtgttcccccatcgc
ctgggcttgccatacaagagggccctgaggaacctcatggcagaccacctcaaacgcatc
atacaggacagcgttgaaggtcatgactccagtgaggacgcctgcgcctgcatggagctc
atgatatggaagatccgagaagacgccaaggtgaagagatga
DBGET
integrated database retrieval system