KEGG   Oncorhynchus mykiss (rainbow trout): 110524379
Entry
110524379         CDS       T07259                                 
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    110524379 (rexo1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:omy03009]
    110524379 (rexo1)
Ribosome biogenesis [BR:omy03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    110524379 (rexo1)
SSDB
Motif
Pfam: EloA-BP1 RNase_T REX3_middle
Other DBs
NCBI-GeneID: 110524379
NCBI-ProteinID: XP_021459642
Ensembl: ENSOMYG00000011649
UniProt: A0A8C7VGV0
LinkDB
Position
5:66401096..66412427
AA seq 1313 aa
MLRSTGFFRGIDCPFYTDSCNGISGKYGCNRPYCHFRHSKHRRASYGSNDTRTSKELYSK
QKEQGGYDPFNPEVVRPEEQQNGEPAAATVDMGALELELVNRAIEAVRSEVEREKKKLSQ
IGDLEYDPSASSPKVLLKPLSQTGDQKYDPTASSPKLVPKPPSRFGDQEYDPTASSPKVM
ANWPKPQAVASHLAYDPGSYQMTTTADYNPTPRSSKYTLDSDSKDNHASSMEYVPTSVTK
TALKKPAPRTRSPHLPSPPTSPKYSNNAAFSKNKYTVDNSKPSTDMEYDPLSNYSAKIAV
KDKKDQRTGASKGEVKKRPHLSGTEKLSTDEEYVPTTKKPRQVIPDPLKYTVSFSESDEE
SSGTEYRPTSLSRLQRRKSSSGSVEETSGPGKGERTERTLGGLKQQRSREAKEQEDSENQ
QVARQKVKPETEKVPGKTSHTKIIKVEKVHKSEKESSKKSGSSKEKGAGDGKKISDSKTS
SHETAKKDSKNQGKKEEEKSKIKDKSIDKGKEGQEEKRSDGKSKLRTDKVKGASSKSERE
KGGGDSKKLKTSDKEKDSSKFKEHKNGKHDSSGRERGFNKVSKGSSNSSKDKVKKNSRSF
LDGKTGKVKQRSLSHVDLFGDESAEEKREEDDEEEKIVRKSAAAFKRGHLNKRNASELTP
SSSEDDDVGPEDDRGYDDMDGGGVDYSGLQMDMDFDLDEDPMEECLRIFNESKDVKTEDK
GRQAKPSKDSDDEDATDSNQTTLFPGQKKRVSHFSAKGSTEATPKPPSYRRLTAQEICYQ
RMQIAQQQASQLAAAVKTASTPRPRPSLSPFPGERKRVAHRPTPLPSSSKSGVVEAKLAG
SRVLSPTRTLPGGVSVKAQTSAGILSKTTTTIAQKRVAHTPTMKSSAMKRPVIPTEFGAK
VPTNVRQRYLNNFIDECMKFCPSEDLAFQMALEEEKVVYDRSSSKNIYLNVAVNTLKKLR
SKSSSPTSPVARSPAVVGNRKAQSHEEVLGGRLAAKTSFTINRTGKQQEEKLSGVRLYRK
LRDYLMTEEQLQEHGYPRPHPERSGRAVVHNVPEKKNVDPFAKVCCRCGAEYKINANGNC
VRKEECNHHWGRLRRHKVSGGWETNYSCCSGTVGSPGCSVSKQHVQDGRKESLDGYVQTF
EKQLPPDGNGGVYALDCEMCYTKQGLELTRVTVINSELKVIYDTFVKPESKVVDYNTRFS
GVTEEDLENATITLRDVQAVILNMFSTESILIGHSLESDLFALKVIHSTVVDTAIVFPHR
LGLPYKRALRNLMADHLKRIIQDSVEGHDSSEDACACMELMIWKIREDAKVKR
NT seq 3942 nt   +upstreamnt  +downstreamnt
atgctgagatccaccggtttcttccgtggaattgactgcccgttttacacggatagctgc
aatgggataagcggcaaatatgggtgcaacagaccatactgccacttcagacacagcaaa
catagacgtgcgtcttatggctcaaatgacactagaacatcaaaagaactttactccaaa
caaaaggagcaaggtggctatgacccattcaacccagaggtagtaagaccagaggagcaa
cagaatggggagcctgctgctgcaacagtggacatgggtgccctcgagcttgagttggtc
aatcgtgccatcgaggcggtacgcagtgaggtggagcgggaaaagaagaagctctcccaa
atcggggacctggaatatgacccttctgccagttctcctaaagtgttgctgaaaccactc
tcacaaactggagaccagaaatatgaccctactgccagttcccccaagctggtgccaaaa
ccaccatcacgatttggggaccaggaatatgatcctactgccagttcccccaaagtgatg
gctaactggccaaaaccacaagccgtggcatcccacttggcgtatgacccaggcagttat
cagatgactacaacagctgattataatcccacccctcgctccagtaagtacaccttggac
tctgacagcaaggacaaccatgccagctccatggaatatgtgcccacctcggttaccaaa
acagctttgaagaagcctgctcctcgaacacgatctcctcatctaccctctccccctact
agtcctaagtactccaataatgcggccttctccaagaacaagtacacagtggataattct
aaaccatccacagacatggaatatgaccctctctccaactattcagctaaaattgctgtc
aaggataagaaagaccagaggacaggtgcttctaagggagaagtgaaaaaaagacctcac
ctgtcagggacagaaaagctgtcaacggatgaggaatatgtgccaaccactaagaagcct
cgacaggtgataccagacccactgaagtacactgtcagtttctctgagtctgatgaggag
agctctgggacagagtatcgacccacctctctcagccgtctgcagaggaggaagagtagc
agtgggtcagtggaggaaacctctggtccagggaaaggagagaggactgaaagaactcta
ggtgggctgaaacaacagaggagtcgggaggctaaagagcaggaagactcggagaaccag
caagtagcaaggcaaaaagtcaaaccagaaactgaaaaagtgccaggtaaaaccagccac
acgaagatcatcaaagtagagaaggtgcataaatctgaaaaggagtccagtaaaaagagt
ggtagtagtaaagaaaaaggagcaggggacggtaagaaaataagtgattcaaagacatca
agccacgaaactgcaaagaaggacagcaagaatcagggaaagaaagaagaggagaaaagc
aagataaaggataaatccatagacaaaggcaaggagggacaggaagaaaagagaagtgat
ggaaagagtaagctaaggacagacaaagtaaaaggggcgtcaagcaagagtgagagagaa
aaggggggtggggatagtaaaaaactgaagacttcagacaaggaaaaggactcttcaaag
tttaaagaacacaagaatggtaaacatgacagcagtggaagagaaaggggcttcaataaa
gttagcaaagggagttctaacagcagtaaagacaaggtgaagaaaaacagcagaagcttc
ttggatggcaaaacaggaaaggtgaaacaaagatctctgagtcacgtagatctgtttggg
gatgagagtgcagaggagaaacgcgaggaggatgacgaggaggaaaaaattgtgaggaag
tcagctgctgctttcaagagggggcatttgaataagaggaatgcctcagagctcaccccc
tcatcctcagaggatgatgacgttggtccagaggatgacagaggctatgatgacatggat
ggtggtggggtggactactccggtctgcagatggacatggactttgacctggatgaagac
ccaatggaggagtgcttacggatcttcaatgaatccaaggatgtgaagacagaggacaag
ggaaggcaagccaagccctctaaagattctgatgatgaggatgccacagacagcaatcaa
actactctctttcctgggcagaagaagagggtttcacatttctccgccaaaggaagtact
gaggcaacaccaaagcctccatcgtacaggagactgactgcccaggagatctgttaccag
cgcatgcagattgcccagcagcaggcctctcagcttgcagcagccgtgaagactgcctct
acacccagacccaggccaagcctcagccccttccctggggagaggaagagagtagcccac
cgccccacccccttaccatcctcctccaagtctggtgttgtcgaggcaaagctagcaggc
agcagagtgttgtcgcccaccaggactctcccaggtggtgtctctgtgaaggcccagaca
tcagccggcatcttgtcaaagaccaccaccactattgcacagaagagggtggcacacact
cccacaatgaagagctctgcaatgaagcgcccagtgattcccactgagtttggagccaaa
gtgcccaccaacgtccgccagcgatacctcaacaactttatagatgagtgtatgaagttc
tgcccctctgaagacttggccttccaaatggccctggaggaagagaaggtggtgtatgac
cggagcagcagtaagaacatctacctcaacgtggcagtcaacacactgaagaagctacgc
agcaagagcagctcccccacctcacccgttgccaggagccctgcagtggtggggaacagg
aaggcccagtcccatgaggaagtgctggggggacgcctcgctgccaagaccagcttcacc
atcaacaggactggcaagcaacaggaggagaaactcagtggtgtcaggctgtacaggaag
ctgagggactatctgatgacggaggagcagctgcaggagcatggataccccaggccacac
cctgagcgctcaggtcgagccgtggtccacaacgtcccggaaaagaagaatgttgaccct
tttgccaaggtgtgctgtcgatgtggggccgagtataagatcaacgccaacggcaactgt
gttcgcaaggaggagtgtaatcatcactggggccgtctgcgcagacataaagtgtcggga
ggctgggagaccaactacagctgctgctcagggactgtgggctctcctggctgctctgtg
tctaagcaacacgttcaggacggacgcaaagaatcattggacggctatgttcagaccttt
gagaaacagctgcccccagacggcaacggtggagtctacgccctggactgtgagatgtgt
tacacaaagcaaggtctggagctgaccagggtgactgttatcaactctgagctgaaagtc
atctatgacacatttgtcaaacccgaaagcaaagtggttgactacaacacacggttttcg
ggtgtaacagaggaggacctggagaatgcgaccatcaccctgagagacgtgcaggctgtg
atcctcaacatgttcagcactgagtccatcctcataggacacagcctggagagtgacctc
tttgccctcaaggtcatacacagcactgtagtggacacagccattgtgttcccccatcgc
ctgggcttgccatacaagagggccctgaggaacctcatggcagaccacctcaaacgcatc
atacaggacagcgttgaaggtcatgactccagtgaggacgcctgcgcctgcatggagctc
atgatatggaagatccgagaagacgccaaggtgaagagatga

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