Oncorhynchus mykiss (rainbow trout): 110524403
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Entry
110524403 CDS
T07259
Name
(RefSeq) glypican-1
KO
K08107
glypican 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
omy00535
]
110524403
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omy00537
]
110524403
Proteoglycans [BR:
omy00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
110524403
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omy00537
]
Others
110524403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Fz
PRAI
Motif
Other DBs
NCBI-GeneID:
110524403
NCBI-ProteinID:
XP_021459678
Ensembl:
ENSOMYG00000013713
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Position
5:67003157..67057676
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AA seq
553 aa
AA seq
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MDFLQALLFFFLSAVPLSADNANSKARSCLDVRQFYSGKGFTLNGVPQTEISGEHLRICP
QGYTCCTSAMEETLSNLSRREFEGLVREAGRSLQASLNTQYRSFDTYFTDLLNRSERSLQ
ESFLATLGSLYSKNAPVFQDLYADLRRYYRGSAVNLEETLNDFWARLLERLFKASSLPQY
TLTDDYLECVAKQTETLRPFGDVPRDLKPKVTRAFVAARSFVQGLTVSGEVVRKVSQVPL
SPECTRAMMKLVYCPHCRGLASVKPCANYCRNVMKGCLANQADLDTEWQNLVDTMLQVAS
SFSADPSVDVVIYSLPIRISEAILYMQENTEVFTSKVFQACGTPRVADTQSSGSEERKKR
VNPASTAMEYKPSPTVGVPLEMQISDVSSKLREMQQYWVQLPAALCNSKVAAGAAGDKCW
NGMTKARYLPEVMGDGLASQINNPEVEIDITKPDMTIRQQIMQLKIMTNRLRNALNGNDV
DFQDASDDISGSGSGMCTGESCARSGPRVIVPKTDSTRYYNPPENKKVKGTGTQTHPSIL
LPLLSLATLLLRR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctacaggctcttctattcttttttctatccgctgtcccgttgtcggcggac
aatgcgaacagtaaagcccggagctgtttggatgtccgacagttctacagcgggaaaggc
ttcaccctcaacggggtgccacagacagagatatctggtgagcacctgcgcatctgtccc
caggggtacacctgctgtaccagtgccatggaggagaccctgtccaacctgagtcgcagg
gagtttgaggggctggtcagagaggcagggcgctcgctacaggcctccctcaacacacaa
tacaggagcttcgacacgtacttcacagacctcttgaacagatccgagcgttcccttcaa
gagtccttcctggccacgctgggctctctctactccaagaacgcccctgtgttccaggac
ctgtacgctgacctgcgtcgctactaccgtggctccgctgtcaacctggaggagacgctc
aacgacttctgggcacggctgctggagcgcctgttcaaggcctcctccctcccgcagtac
accctcactgacgactacctggagtgtgtggccaagcaaacggagaccctgcggcccttt
ggggacgtcccccgtgacctcaagcccaaggtcaccagggccttcgtggcggcgcggtca
ttcgtccagggcttgactgtcagtggggaggtggtccgcaaagtttcccaggttcctctg
agcccagagtgtacccgtgctatgatgaagcttgtgtactgcccccactgtagaggcctg
gcctccgtcaagccctgtgccaactactgcagaaacgtcatgaagggctgccttgccaac
caggccgacctggacaccgagtggcagaacctcgtcgacaccatgctgcaggtggcgtct
agtttcagtgctgaccccagtgtggatgtggtcatctactccctccccatccgcatctca
gaggccatcctctacatgcaggagaacacagaggtcttcaccagcaaggtgttccaggcc
tgtgggacccccagggtggcagacacacagagctcagggtctgaggagagaaagaagaga
gtgaaccctgccagcaccgcaatggagtacaaacccagccccaccgtaggggtcccactg
gagatgcagatatctgatgtgtccagtaagctgcgggagatgcagcagtactgggtccag
ctgccagctgctctgtgcaatagtaaagtggcagcaggagcagctggtgacaagtgttgg
aatggcatgaccaaggccaggtatcttcctgaggtgatgggtgacggcctggccagccag
atcaataaccccgaggtggaaattgacatcaccaagccagacatgactatccgccagcaa
atcatgcagctgaagatcatgaccaaccggctgaggaacgccctcaacggcaacgacgtg
gacttccaggatgccagtgatgacatcagcggttcaggaagtggaatgtgtacaggcgag
tcatgtgctcgtagcggacctcgtgtcattgtgcccaaaacagacagcaccagatactac
aatcctcctgagaacaagaaggtgaagggcacaggaacccagacccacccctctatcctc
ctccccctgctctcattggccacactgctgctcaggcgataa
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