Oncorhynchus mykiss (rainbow trout): 110524442
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Entry
110524442 CDS
T07259
Name
(RefSeq) probable voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110524442
04020 Calcium signaling pathway
110524442
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110524442
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
110524442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
110524442
NCBI-ProteinID:
XP_036834129
Ensembl:
ENSOMYG00000021474
LinkDB
All DBs
Position
5:complement(69239531..69350551)
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AA seq
2253 aa
AA seq
DB search
MILATIIANCIVLALEQHLPGEDKTPMSKRLEKTEPYFIGMFCFEAGIKVVALGFVFHKG
SYLRNGWNVMDFIVVLSGILATAGAHMNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKS
IMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHNTCLPMPNILENETVDKSESEFPCG
VRKCPDKYACSETWIGPNDGITQFDNILFAVLTVFQCITMEGWTTVLYNTNDALGPTWNC
MYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIERELNGYRAWID
RAEEVMLAEENKNLGPSALDAPKRLSEWNTGGNHVLKRTTIKRRGLDAVHRGPEEEQYGD
ISSVGIPMTRASIRSAKRGPTAYFKRKERLLRISIRRMVKTHTFYWTVLGLVALNTLCVA
IVHHNQPHWLSVFLYYAEFLFLGLFLTEMCLKMYSLGPRLYFHSAFNRFDCGVIVGSIFE
VMWGFFRPDMSFGISVLRALRLLRIFKITKYWASLRNLVVSLMNSMKSIISLIFLLFLFI
LVFALLGMQLFGGRFIFEDYTPTNFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVKS
GMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEDEEAAFNQKHALQKAKEV
GAMSSLMSSHRRRRPYLYRKRAIHRSRPAYSLEEAESLAEGPPCPPLNSSNSFMSRGERR
RRMTMSVWEQRTSQLRRHRQMSSREILFSSPSEEQEAPPGCPHNLKATGTPTGSLKLADP
TADPTASTTQPPKPMDQTLEEPPLSMGVLEPPLSLPLAEPPIPIDSPLPDPPTSTVVSIP
EPTESEPCPEGQLDDTDHCHPGLNGRRSPRLNGERRQRAVRKFRPPAGDTLTPDMAGMRL
RRPRGTGHHEAQAGARGLDSPQGEGNSRSVSKERKTPEERQDKERRACNTGETSQPSETR
EAEHRQGDPNQAGGPELQNREEGPQSEPPPIQPFQAAVPERPEGQTRDSDTGNNATTLNQ
DKSPLSSSIYIEVTNVQSSLELTPITGNSKDMEASKPEKEEEQLTSPANIVTPDSMFIFK
PGNPIRRACHYVVNLRYFETCILLVIAASSIALAAEDPVSATSNWNKVLRYFDYVFTGVF
TFEMIIKMIDQGLILHDGSYFRDLWNILDFIVVVGALVAFALTNVLGNNKGRDIKTIKSL
RVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFY
CTDGSKDTEKDCQGFYIDYEKDKKEVKRRDWRRHDFHYDNIVWALLTLFTVSTGEGWPQV
LQHSVDVTEEDRGPSRGNRMEMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEEC
SLEKNERACIDFAISAKPLTRYMPQNRQTFQYRLWHFVVSPSFEYTVLAMIALNTIVLMM
KYYSAPPAYEAVLKHLNTAFTVLFSVECVLKIMAFGFLNYFRDTWNIFDFITVLGSITEI
VVDLQSIETFNMGFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFI
YAIIGMQVFGNIRLDEETHINQHNNFKTFFGALMLLFRSATGESWQEIMLSCLGGQKCEP
DPLALTSDHEERCGTEFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHL
DEFVRIWGEYDRAACGRIHYTDMYEMLTLMSPPLGLGKKCPSKVAYKRLVLMNMPVDEEM
SVHFTSTLMALIRTALEVKIARGGEDRGQMDSDLQKEISVIWSHLSQKTLDLLVPIHKAS
HMTIGKIYAAMMIMDYYKQSKAKKLRQQLEEQKHAPMFQRMDASSLPQEILCSAKALPFL
PHSPGSALTRGGFVALSPISPQEMFMQPMSQDLEDREEDYHNYHHHHLLHHQLHTLVPER
KEFNRNLCPTNRQDAPLRVPGRAVSIRASSMPRLAVDTQVGTDSSKSMKRSFSTIGDQCV
NGLWQEEYSLKRVSPDRLNRPRQRSIRGIRCNLREPVDHERGRSKERRHLLSPDVSRCNS
EERSQDPSQERKQSRSPSEGRTHALHRQGNTSGSPDLSSTPRGRRQLPQTPLRPRPHISY
SPLVCRAHLSPPAASEGRARTQEAPGETEDPSLREEGERLAPESGAGVGVVIGVGGPGLG
VSHPHHSPHRYISEPYLTLHEELHSPDSSGLDETLTFEAAIATSLGRANTISSAPQLRHN
WQVPNGHFHKRLGQASSVVACELLSDTDEDDRC
NT seq
6762 nt
NT seq
+upstream
nt +downstream
nt
atgatcttagccaccatcatcgccaactgtatcgtactggctttggagcagcacctgcct
ggagaggacaagactcccatgtccaagagactggaaaagacagagccttacttcattggg
atgttctgctttgaagctgggattaaggttgtggcgttgggatttgtattccataaagga
tcctacttgaggaacggctggaacgtcatggacttcattgtggttctgagtgggattctg
gccacagcgggagctcacatgaacatcccagtggacctgcggaccctgcgggccgtacgc
gtgctccgacccctcaaactggtctctggaatccccagcctgcagatagtcctgaaatcc
atcatgaaagccatggtgccgctgctccagatcggcctgctgctcttctttgccattctc
atgtttgccatcatcggcctggagttctacagtggaaagctccacaacacctgtctgccc
atgccaaatatcctggagaatgaaacggtggacaagtcagagtcagagttcccgtgtggg
gtgaggaagtgccctgacaagtacgcctgcagtgaaacctggatcggccccaacgatggc
atcacccagtttgacaacatcctgtttgctgtcctcaccgtcttccagtgcatcaccatg
gagggctggaccaccgtgctctacaataccaacgatgccttaggccccacgtggaactgc
atgtacttcatccctctgataatcatcggctccttcttcgtgctgaacctggttttggga
gttctttcaggggagtttgccaaggagagggagcgggtagaaaaccgcagggcattcatg
aagctccggaggcaacagcaaattgagcgggaactcaatggctaccgagcctggatcgac
agagcagaagaggtgatgcttgcggaggagaacaagaatttaggaccttctgctcttgat
gctcccaagaggctgtctgaatggaatacaggcggtaaccatgtgctgaagaggaccacc
atcaagaggagagggttggatgccgtccaccggggcccagaggaggagcagtacggtgac
atctcttctgtgggcatcccgatgaccagagccagcatcaggagtgctaagagaggaccc
acggcttatttcaagcggaaggagcgtctgctgcgtatctctatccgccgcatggtgaag
acacacaccttctactggaccgtactgggcctggtggccctcaacacactctgtgtggcc
atcgtccatcacaaccagccccactggctgtctgtgttcctctactatgcagagtttctc
ttcctgggtctgtttctcactgagatgtgtttaaagatgtacagcctgggacccagactc
tacttccactccgccttcaaccgcttcgactgcggcgtgatagtgggcagcatctttgag
gtgatgtgggggttcttcaggccagacatgtccttcggcatcagtgtgctgcgcgctctc
cgtctgctgaggatattcaagatcaccaagtactgggcgtcgctgaggaacctggtggta
tccctgatgaattctatgaagtccatcatcagcctcatcttcctcctcttcctcttcatc
ctggtctttgctctgctgggcatgcagctattcggtggcaggttcatctttgaagactac
actcctacaaattttgacacatttcctgctgccatcatgactgtctttcagatcctgaca
ggagaagactggaatgaggtgatgtacaatgggatccgctcccagggaggagtgaagtca
ggaatgtggtcctccatatacttcattgtgctcacactctttggtaactacacactgctg
aatgtcttcttggccattgctgtggacaatctggctaatgcccaggaactaaccaaggac
gaagaggacgaagaggctgctttcaatcagaaacatgctctccaaaaagccaaggaagtt
ggggccatgtcttccctgatgtcatcacacaggaggaggagaccgtacctgtacaggaaa
agagcgatacacaggagccggcctgcctactctctggaggaggctgagagcctcgccgag
gggcccccctgcccgccattgaattcctctaactctttcatgtccaggggagagaggaga
agacggatgaccatgtctgtgtgggagcagagaaccagccaactgcgcaggcaccggcag
atgtccagccgagagatcctcttcagcagccccagtgaggagcaggaagcgccccctgga
tgcccccacaacctcaaagccacaggcacacccacaggcagcctgaagctggctgacccc
acggctgaccctacggcctccacaactcagccccccaagcccatggaccaaactctagag
gagccacccctgtccatgggggtccttgagccccccttgtccctccctttagcagagcca
cccatacccatcgacagtcccctgcctgacccccccacgtccacagttgtgtccattccg
gagcccactgaatctgagccatgcccagagggccagcttgatgacaccgaccactgccac
ccaggtctcaatggccgcaggagccccaggttaaatggggagagaaggcagagagcagtg
cgtaagttccgccctcctgctggtgacaccctgacccctgacatggcagggatgaggctc
aggaggccaaggggcacagggcaccacgaagcccaggctggggctagaggcctggactca
ccccagggggaggggaacagtcgctctgtcagcaaggagagaaagaccccagaggaacga
caggacaaggagaggagagcctgtaacacgggagagaccagccagccttctgagaccaga
gaagctgaacacagacagggtgaccctaaccaggctgggggtcctgagctgcagaacagg
gaggagggtccacagtcagaaccaccccccattcagccatttcaggctgcagtaccggag
cgcccagagggccagacaagagacagtgatactggtaacaacgccaccactctgaaccag
gataagtcccctctgagctccagtatctacatagaggtgaccaatgttcagtcttcacta
gagctcacccccatcacaggtaacagtaaagacatggaggcgtccaagcctgagaaagaa
gaggagcagttgaccagcccagccaatattgtcacgcctgacagcatgttcatcttcaaa
cctggcaacccgatccgccgggcctgtcactatgtggtgaacctgcgttactttgagaca
tgcatcctgctggtgatcgctgccagcagtatcgccctggctgcagaggaccccgtgtca
gccacctctaactggaacaaagttttgcgttactttgactacgtgttcacaggtgtcttt
acatttgaaatgataataaagatgatagaccagggcttgattctccatgacggctcctat
ttccgggacctgtggaacattctagactttatcgtggtggtcggagctctggtggccttc
gccctcacgaatgtgttgggaaataataaaggacgggacatcaaaaccatcaagtctctt
cgggtcctgcgtgtcctgaggcccctgaagaccatcaagagactaccgaaacttaaggca
gtgtttgactgtgtggtgacctctctgaagaacgtcttcaacatcctcatcgtctacaag
ctcttcatgttcatcttcgctgtcatcgctgtgcagctgttcaaagggaagttcttctac
tgcacagacggatccaaagacacagagaaggactgccaaggcttctacattgactatgag
aaggataaaaaggaagtgaagagaagggattggaggagacatgacttccactatgacaac
atagtctgggccctactcactctgtttactgtctccactggggagggctggccacaggtc
ctgcagcactctgtggatgtgacagaggaggacagaggtcccagcaggggcaacaggatg
gagatgtccatattctatgtcatctactttgtggtcttccccttcttctttgtcaacatc
tttgtggctctcatcatcatcaccttccaggagcagggagacaagatgatggaggaatgc
agcttggagaagaacgagagggcttgcattgactttgccataagtgccaaacccctgacc
cgctacatgcctcagaacaggcagacgttccagtaccgcctctggcactttgtggtctcc
ccctccttcgaatacactgtgctggccatgattgcactcaacaccattgtcctgatgatg
aagtattactctgccccaccagcatacgaggctgtgctgaaacacctgaacacagctttc
actgtgctcttctctgtggagtgtgtcctcaagatcatggcctttggctttctgaactac
tttcgagacacttggaatatattcgacttcatcacagttttgggaagcatcacagaaata
gtggtagacttgcagtcaattgagaccttcaacatgggtttcctgaagctgttccgtgca
gccagactgatcaagctgttgaggcagggttacaccatccgcatcctgctctggaccttt
gtccagtcctttaaggctctcccctacgtttgtctgctcattgccatgctctttttcata
tatgcaatcatcggaatgcaggtttttggaaacatcagactggatgaggagacacacatc
aaccaacacaacaacttcaagaccttttttggtgctctgatgttgctattcaggagtgcc
acgggggagtcgtggcaggagatcatgctgtcatgtttaggggggcagaagtgtgagcca
gaccccttagctctaacatcagaccacgaggagcgctgtggaactgagtttgcctacttc
tactttgtctccttcatcttcttcagttcatttctgatgctgaatctgtttgtggctgta
atcatggacaactttgagtacctcacccgggattcctcgatattggggcctcaccacctg
gatgaatttgttcgtatctggggtgaatatgaccgagctgcttgcgggcgtattcattac
actgacatgtatgaaatgctgaccctcatgtcgccacctctaggcctcggcaagaaatgt
ccatccaaagtggcttataagaggctggtgctaatgaacatgcctgtggatgaagagatg
tcggttcacttcacctccaccctcatggccctgatccgaaccgccctcgaggtgaagata
gccagaggaggggaggaccgaggtcagatggattcagatctacagaaggagataagtgtc
atttggtcacacctttcacagaagaccctggacctgctcgtccccatccacaaagccagt
catatgaccattgggaagatctatgcagccatgatgatcatggactactacaagcagagc
aaagccaagaagctcaggcaacagctggaggagcagaaacacgctcccatgttccagcgt
atggacgcgtcctctctgcctcaagagatcctctgcagtgccaaagccctccctttcctg
ccccacagccctggatctgccctgaccagaggaggatttgtggccttgagtcccatatcc
cctcaggagatgttcatgcagcccatgtcccaggacctagaggacagagaggaggactac
cacaactatcaccaccaccacctgctccaccaccagctccacacactggttccggagcgc
aaagagtttaaccgcaacctttgccccactaacaggcaggatgccccactcagggtgccc
gggcgggcagtctctatccgagcctcctctatgcctcggctggctgtagacacacaggtg
gggacagacagcagcaaatcaatgaagcgctccttctccactattggggatcaatgtgtg
aatggcctgtggcaggaggagtactctctgaagagggtcagtcctgaccgtctgaacaga
ccacgacagaggagcatcagaggaatcaggtgcaacctcagggaaccagtggatcatgag
cgggggcgctccaaagagaggcgtcacctgctgtctcccgacgtgtcccgctgcaactct
gaggagcggagccaggacccgtcacaagaacgcaagcagtcccgttcccccagcgaggga
cgcacacatgccctccacagacagggcaacacttcaggcagcccagacctgtccagcaca
ccccgcggccggcgccaactcccccagacgcccttgcggccacgccctcacatctcctac
tcccccctggtgtgcagagcccacctctccccccctgctgccagtgagggcagagcccgg
acccaggaggcccccggagagacggaggatccctcgttgcgggaggagggggagaggcta
gccccagagtcaggagcgggggtgggggtggtaataggggtgggtggcccagggttaggg
gtcagtcacccgcaccactcacctcaccggtacatctcggagccgtacctgaccctgcac
gaggagttacacagcccagactcctcaggcctggatgagactctgaccttcgaggcggcc
attgcaaccagtctgggccgggccaacaccatcagttctgccccccagctcagacacaac
tggcaggtccccaacggacacttccataaacgcctgggtcaggccagctctgtggttgcc
tgcgagctcttgagtgacacggacgaggatgaccgctgttag
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integrated database retrieval system
