Oncorhynchus mykiss (rainbow trout): 110524539
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Entry
110524539 CDS
T07259
Symbol
palld
Name
(RefSeq) palladin isoform X1
KO
K22029
palladin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110524539 (palld)
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
110524539 (palld)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
C2-set_2
Motif
Other DBs
NCBI-GeneID:
110524539
NCBI-ProteinID:
XP_036834245
LinkDB
All DBs
Position
5:complement(73691856..73787594)
Genome browser
AA seq
1779 aa
AA seq
DB search
MQDGRWNQSLPLSLLMKDGGRVLEGDGGVFSETSSDGDLYLDSMADMDNGVGDFSDLTAF
LSQDEINRSLDLAREAFSDAEDRGVTVSPIPRTQEPALYFPSPTPFNTTEYLTKSPSFPH
QTEAHSPDDSHSVKVTSSQSFHLSRPIQATCEAVALPEKFVCHKNITPVYKQDKPRLVHE
GLELNERAASATEFCSRAATFIEELSSIFKGSARPEQMGEEDSSSPDSGYLSPKSHWPAP
QGSASVPPQPLIQQGAPQQCEPGLGIQPASMMGGMGVTGVPPLSVTGVPIVSNLMSVNEL
MGKQQHSGALLMGEQQHSGAQLMGKQQHSGAQLMGEQHSGAKLMGKQQHSEAQLMGKQQH
SGAQLMGKQQHSEAQLIGKQQHSGAQLMGKQQHSGAQLMGEQQHSGAQLMGKQQHSEAQL
MGKQQHSGAQLMGKQQHSGTQLMGEQHSGAKLMGEQQHSEAQLMGKQQHSGAKLMGEQQH
SGAQLMGEQQYSGAKLMGEQQHSGTQLMGEQQHSGAQLMGEQQHSGAKFMGEQQHSGTQL
MGEQQHSGAQLMGEQQHSGAQLMGKQQHSGAQLMGEQHSRAKLMREQQHSEAQLMGEQRH
SGAQLMGEKLSGAQSVDGDLSLPHFTQKLKSQEVAEGHPIRLECRVAGNPQPLVRWFCEG
RELHHCPDIQIWRDGALHTLVIAEAFEDDTGRYTCVASNSLGADNTSAEVYIQGASSSDS
EGEVQKSRSGAMPQVQKKTTSISLSIRSPSPKSPEAVPHRSTLVLSAPPHRMQSPVYSLY
GGGGPLTAPPIFTKLLQDAQASEGQVVVLECRVRGSFPLQVQWFRQGQVIQDSPDFRILQ
KKPRSAAEPEEICTLVIAEAFPEDGGQFCCIATNLYGSVSSTAQLSVSGGAFNTPTAVYD
SVRNGVAPGDDSVFEDTQAFPPPPPTEISLLEVPPKVPPSTCAEGFHVNELEIWPSMSGL
QPVHMYHDVEGQDRANWALQNGRPASPPQPSFSLLPREAQPDFPGPAKMSPSPVKEGPPL
PTKPKLAEGIEEETEHDRNAEQLKQLQDQIILEQQEAANWIQHQEQEQEVPPLPQQPPEV
PSLPFPPLPPPPSFQELESSAMQTSTFNYARPKQFIAAQSPGGTGPMGGYVTQSSGSSGS
SLPSPLSPPTSQKPFTRVVLPPFSKGGSIESQSPSSPSFPPPPPPFLSSSISSLSGPAKD
FPPPPPPPPPPASSAPPYSLAHSNSSSPFTSMPQSPAGFLASVLPATPTSPSFNALGLPK
GNGTISAFPRKQSRGTPRLASDSDIQGTKDAVIQDLERKLRFKEERMSNGQQRLTYEEKM
ARRLLGADNAATVLNTQQQDEEPVTQDSSSSDIESVPQKEYKVSSFEQRLISEIEFRLER
SPVEESDDDVQHDEDATGTGVVPFFDSKLKHYKVFEGMPVTFSCKVIGDPKPKIYWFKDG
KQISKRSEHYRISRDADGTCNLHTAAASLDDDGNYTIMAGNPEGRVSCTGRMMVQAVNQR
GRSQRSAPGHIRRPRSRSRDSGDENENIQERHFRPHFLQAPGDLIVQEGRLCRMDCKVSG
LPTPDLIWQLNGETIRPDSAHKMLVRENGVHSLVIEPVSSRDAGIYTCIASNRAGQNSFN
LELIVAAKEMHKAPSFIEKLQNTGVAEGYPVRLECRVSAVPYPQIFWKKENESFTHNTDR
ISMHQDNCGYLCMIIQPAMKEDAGWYTVSAKNEAGIVSSTARLDVHTQWQQPNTPKPKKV
RPSTSRYAALTERGLDVKAAFFPDSSPLQPGGLVESDDL
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgggagatggaatcagtccctccccctctctctgcttatgaaggatgggggc
agggttctagagggagacggaggggtgttctcagagacgtcgtctgatggggatctatac
ctggactctatggcggatatggacaacggagttggggacttttcagatcttaccgccttc
ctcagccaagacgagatcaaccgcagcctggacctggctcgggaggccttcagtgatgca
gaagaccggggagtcactgtctctcctattcccagaacccaggagccggctctctacttc
ccctcccccacccccttcaacaccacagaatacctgaccaaaagccccagcttcccccac
caaaccgaagcccactccccagatgacagtcactcagtcaaagtcacctccagccagagt
ttccacctcagtaggcccatacaggccacatgcgaagccgtggccttgcctgagaagttt
gtctgccacaagaacatcaccccagtctacaagcaggacaagccccgactggtccacgag
ggcttagagctgaatgaacgggctgcctccgccactgagttctgtagccgtgctgccacc
ttcatcgaggagctgtcctccatctttaaaggctccgcccggccggagcaaatgggggag
gaagactcctcctctcccgacagcgggtatctgtctcctaagagccactggccggccccc
cagggctctgcctctgtccccccacagcctctcatccaacagggggcaccacagcagtgt
gagccaggcttgggtatccagccagcaagcatgatgggtggaatgggtgtgacgggtgtc
cctcctctgagtgtgacgggggttccaattgtctccaatctgatgagtgtgaatgagttg
atggggaagcagcagcacagtggagccctgttgatgggggagcagcagcacagtggagct
cagttgatggggaagcagcagcacagtggagcccagttgatgggggagcagcacagtgga
gccaagttgatggggaagcagcagcacagtgaagcccagttgatggggaagcagcagcac
agtggagcccagttgatggggaagcagcagcacagtgaagcccagttgatagggaagcag
cagcacagtggagcccagttgatggggaagcagcagcacagtggagcccagttgatgggg
gagcagcagcacagtggagcccagttaatggggaagcagcagcacagtgaagcccagttg
atggggaagcagcagcacagtggagcccagttgatggggaagcagcagcacagtggaacc
cagttgatgggggagcagcacagtggagccaagttgatgggggagcagcagcacagtgaa
gcccagttgatggggaagcagcagcacagtggagccaagttgatgggggagcagcagcac
agtggagcccagttgatgggggagcagcagtacagtggagccaagttgatgggggagcag
cagcacagtggaacccagttgatgggggagcagcagcacagtggagcccagttgatgggg
gagcagcagcacagtggagccaagtttatgggggagcagcagcacagtggaacccagttg
atgggggagcagcagcacagtggagcccagttgatgggggagcagcagcacagtggagcc
cagttgatggggaagcagcagcacagtggagcccagttgatgggggagcagcacagtaga
gccaagttgatgagggagcagcagcacagtgaagcccagttgatgggggagcagcggcac
agtggagcccagttgatgggggagaagctcagtggagcacagagtgtagatggagacctg
tcactgccacactttacccagaagctgaagagccaggaggtggcagagggacaccccatc
cgactggagtgcagggtggcaggaaatcctcagccactggtcaggtggttctgtgagggg
cgggagctgcaccactgtcctgacatccagatctggagggatggtgccctacacacgctg
gtgatcgctgaggccttcgaggacgacacgggacgctacacctgcgtggcctccaacagc
ctgggggcggacaacacctcggcagaggtctacatccagggtgcttcatcctccgactca
gaaggagaagtgcagaagtccagatcaggagccatgcctcaggtccagaagaagacgact
tcaatctccctgtccattcgttcaccttcacccaagagccctgaggctgtacctcaccgc
tccaccctggtcctatctgcacccccacaccggatgcagagtccagtttattcactatat
ggaggtggtggtcctcttacagcgccccctatctttaccaagctcttacaggatgcccag
gcatcagagggtcaggtggtggtgttggagtgcagggttcgaggcagctttcctctgcag
gtccagtggttcagacagggacaggtcatccaggactctccagacttccgcatcctgcag
aaaaagccacggtctgcagcagagccagaggagatctgtacactggtgatagcagaggcc
ttcccagaggatggaggtcagttctgctgcattgcaaccaacctttacggctccgtcagc
agcacagcccaactctctgtcagtggaggggccttcaacactcccacagcggtgtacgac
tcggtcaggaatggtgtggcgcccggggatgactctgtctttgaggacacccaggccttt
ccccctcccccgcccacagagatcagcctattggaggttccgcccaaggtcccacccagt
acctgcgccgagggtttccacgtcaacgagctggagatctggcccagcatgtcgggcctg
cagcctgtccacatgtaccacgacgtggagggtcaggaccgggccaactgggcactgcag
aacggcaggcctgccagcccccctcagccctccttcagcctgcttccccgagaggcccag
ccagacttcccaggcccagccaagatgtctccgtccccagtgaaggaaggtcctccactg
cccaccaagcccaaactagcggagggtatagaggaggagacagaacatgacaggaacgca
gaacagttgaagcagctgcaggatcagattatattggaacagcaggaagcagccaattgg
atccaacatcaggagcaagagcaggaagtcccgcctctgccacagcagcccccggaagtg
ccctctctgccttttcctcctcttccccctcctccctccttccaggagctggagagcagc
gccatgcagaccagtaccttcaactacgcccggccaaagcagttcattgctgcccagagc
cctggggggactggccctatggggggctatgtcacccagtcctcggggtcctctggttcc
agcctgccctcccccctctccccacccacctcacaaaaacccttcaccagggttgtcctg
cctcccttcagtaagggcggcagcattgagtctcagtccccttcctctccctccttccca
cctccacctcctcccttcctcagtagcagcatttcatccttgtcaggccctgccaaagac
ttccctccaccccctcctccccctcctccacctgcctcttcggctcccccctactccctc
gcccactccaacagctcctcccccttcacctccatgccccaatcacctgctggcttcctg
gcctctgtccttccagccacacccactagcccatccttcaacgccctgggcctgcctaaa
gggaacgggactatcagtgcttttccccggaagcagtccagaggaaccccacgcctggcc
tcagactctgatatccagggaaccaaggatgctgtcattcaggacctggagaggaagcta
cgattcaaggaggagcgcatgagcaacggacaacagaggttaacctatgaggagaagatg
gctcgcaggctgctgggggcagacaacgcagccacagtactaaacacacagcagcaggat
gaggagccagttacacaggattccagttcctctgacatagaatctgtccctcaaaaggag
tacaaggtgtccagctttgagcaacgcctgatcagtgagatcgagttccgtctggagcgc
tctccagtggaggagtctgacgacgatgtgcagcatgacgaggatgccaccggcaccggg
gtggtgcccttcttcgacagcaagctcaaacactacaaggtgttcgagggcatgcccgtc
accttctcctgcaaggtcattggagaccccaagccaaagatctactggtttaaggatggg
aagcagatctctaagaggagtgaacactacaggatcagccgtgacgctgacgggacctgc
aacctccacacagccgccgcctcattggacgatgacggcaactacaccattatggctggt
aaccctgaggggagggtgagctgtactggaaggatgatggtccaggcagtgaaccagagg
gggaggagccagcgctctgcacctggacacatccgcagacctaggtctcggtccagagac
agtggtgatgagaacgagaacatccaggagcgtcacttccgcccccacttcctgcaggcg
cctggtgacctcatcgtccaggagggtaggctctgccggatggactgcaaggtgagtggc
ttgcccacaccagacctgatctggcagctgaatggtgagaccatccgccctgactccgcc
cacaagatgctggtgagggagaatggcgtccactcgctggtcatcgagcccgtgtccagc
cgtgatgcaggcatctacacctgcattgccagcaaccgcgctggacagaactccttcaac
ctggaactcattgtagcagccaaagagatgcacaaggccccttcgttcatcgagaagcta
cagaacactggtgttgccgagggttacccggtgcgtctggagtgccgtgtgtcggctgtt
ccctacccacagatcttttggaagaaagagaatgagtctttcacgcacaacacagacagg
ataagcatgcaccaggacaactgtggctatctgtgtatgatcatccaaccagcaatgaag
gaggacgctggctggtacaccgtgtctgccaagaacgaggctggcattgtgtccagcact
gcacgactcgacgtccacactcagtggcagcagcccaacactcccaagcctaagaaggtg
cgtccgtcgacgagtcgctatgcagcgctgacagagagaggactggacgtgaaggcagcc
ttcttccccgactccagccccctgcagccgggaggcctggtggagagtgatgacctgtag
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integrated database retrieval system