Oncorhynchus mykiss (rainbow trout): 110524563
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Entry
110524563 CDS
T07259
Symbol
shank2b
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2b isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SH3_2
PDZ_6
PDZ
Ank_2
SH3_9
Ank
SH3_1
Ank_4
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
110524563
NCBI-ProteinID:
XP_036835464
LinkDB
All DBs
Position
1:51214830..51341633
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AA seq
1524 aa
AA seq
DB search
MGVQNASGNTALHICALYKQEHCARVLLVRGANKEVKNYRSQTSFQVAIIAGNFELAELI
KNHKETDIVPFREAPAQTARRKQAPRSTLAAPRPTLLRSNSDNNLNVNNRSPLPSPSHSP
LRSLSPRRPQQQQMPSPNGTVRTMGKGAPRPPRSPSLGRLGEEARRQTPQRQPSPHRGRE
AFSDGIDSQGPTRKLYSAVPGKHYVVTQSYQPQAEGEIPLYKNDKVKVLSVGESGFWEGS
ARGNLGWFPAECVEENIPNQVQEEKPYARADRAERRKLFRHYTVGSYDSFDASSDCVIDE
KTVVLQKKDNEGFGFVLRGAKADTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRNGDF
LIEVNQENVVKVGHKQVVNTIRHGGNRLIIKVVTVSRNLDPDDTARKKVPTPPRRAPSTA
LSMAMRSKSMTSELEELATLRKKVTGDKVDENMPPQKPMWENSNADVRVANTVKSRPNSR
CFAMSPEMNSMCESQDMSMQTQTQPREPGSPRGRGPYLGVPNRQGTMRRQKSIGTSGITE
EETPQFLTPPMLKFTRSLSMPDTSEDIPPPPAISPPSPPYNNAPNPQGRGYGIIRHSAPK
GTAPERGDLTAGGSDGWREQGGMYYREPQSEQYQSEDHQQGSHSPGQGLTAQQSFLNRRA
QIPENPYSDLGKMGNLGLFAPNKPQRKKGMLVKQDKIEDSPEKICTIKIPTIIIKEPSTS
SSGKSSQGSSMEIETGAHDHPGQLRPDDGHNPSSPFATAMAGAVRERERRMVESHQNSPS
YRFTDQGDEDSPPAPTPRLRHSKSIDEGMFSSDERLRRIMAPPASLLNIPKGGGNVTNFN
TSEPNMVREPLHTRTGHHSPVSLPNKTYTSSSGHYVHPVTGKPLDPNSPLALALAARDRA
MREQSQPLPLKTELPKPDLNKPLFIDTKLRTGMDASFSATATMGRPGRAGLRRQMTEAKY
ETESKYDHPLAKDQDKSLSRPEREEEKKNMLIDNVDTSQQKSAGLLMVHTTDGARSEENS
LSEGDRDGAVSPDSTPSELRDPNQPNTSKMSSPNPHNSHSMGPGPRGSKTMITVTSVDEP
VKLPFGIPPPPCVPSVDIDDDFFADPLPPPLEFANSFDIPEDQKGAIAELLKQHRNAGRA
PSSLAPFYPHHGNTPSHPDQTMIKRPAVLTNCMPPSFTPNALESYEPISDSGIDVEPDSR
SSGDPQMETTSTVSTVSSISTLSSDGGEMLDNTCTVYADGQAFLVDRTSKPKNRQPAANK
SNALYKDPALMDREENLRTFGTPSSVPPPPPGACVHSEPPRTPTQRTSKLWGDPPGSNPY
DMQNKDKTPKPGDGIDSSSSGCRTVFGSRGPDGGSLASGTLRNTTVTFAAQLGSSVPAPS
PKRETESLPHHRAPSPILSPPDSGLGCASSLPATSPTLSDVFGLPTPPLSLGTGSSRSPS
PLTLMQAVSNKPFATKPVLMWSKHDVADWLESLNLAEHRDTFMDNDIEGSHLPSLQKDDL
IDLGVTRVGHRMNIERALKLLMDR
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtccagaacgcctcgggaaacacggctctacacatctgtgctctatacaagcag
gaacactgtgccagagtactgcttgttcgtggtgccaacaaggaagtgaagaactacaga
agccagacatcattccaggtggccatcatcgcggggaactttgaattggcagaattaatc
aagaatcacaaagagactgatattgtgcctttccgtgaggcgccggcccagactgcccgg
cgcaagcaagccccacggagcaccctcgctgcaccacggccgacgctcttgcgctccaac
agcgacaacaacctgaacgtgaacaaccggtcacccctgccgtccccgagccactctccc
ctgcgtagcctctccccccgccggccccagcagcagcagatgcccagccccaatggaaca
gtcaggaccatggggaagggggctccccgccctccccgctcaccttccctggggcgcctg
ggggaggaagcacggagacagacccctcagcgacagcccagcccccacaggggtcgggaa
gccttctctgatggcatagacagccaggggcccacgcgtaagctgtacagtgctgtgcca
ggcaagcactatgtggtgacccagtcctaccaaccacaggccgaaggagagatccccctg
tacaagaacgacaaggtcaaagtgctctccgtaggggaaagtggtttctgggagggcagt
gcccgtggtaacttggggtggttcccagcagagtgtgtggaggagaacatccctaaccaa
gtccaggaggagaaaccatatgccagggcagacagagctgagaggaggaagctcttcagg
cactacactgtgggatcctacgacagctttgatgcgtcaagcgactgtgttattgacgag
aagacggtagttctacagaagaaggataatgagggattcgggtttgtgctgcgaggggcg
aaagcggacacgcctatcgaggagtttactcccacccctgccttccccgccttgcagtac
ttggagtctgtggacgagggcggggttgcgtggcgggcggggcttcgcaacggagacttc
ctcatcgaggtgaaccaggaaaatgtggtgaaggtgggccacaaacaggtggtcaatacg
atccgacacgggggaaaccggctcatcatcaaagtggtgacggttagcaggaatctggac
cctgatgacacggctaggaagaaagtgcccacacctccgcgtagggctccctccactgcc
ctgtccatggccatgcgctctaaatccatgacatcagagctggaggagcttgccactttg
aggaaaaaagtgaccggtgataaagtggacgagaacatgcctcctcagaagcctatgtgg
gagaactccaatgctgacgtaagggtcgctaacacagtcaagtcacggcccaacagcagg
tgcttcgccatgagccccgagatgaattccatgtgtgagagccaggatatgtcgatgcag
acccagacccaacccagagagccaggcagtcccagaggtcgaggaccctacctgggggtg
cctaacagacaggggaccatgagacgacagaagtccataggaacatctggaataacagaa
gaggagacccctcagtttctgacccctcccatgttgaaattcaccaggagcctctccatg
ccggacacatcagaggacatcccacccccacccgccatctcccctccatctcccccttac
aacaacgcccccaacccccagggcagaggctacggcatcatcagacactctgctcctaaa
ggcaccgccccagagcgaggggacctcaccgcgggcggcagcgatgggtggagggagcag
gggggtatgtactacagagagccccagtcggaacagtaccagtctgaggaccaccaacag
ggaagccacagcccaggccaaggcctcacagcccagcagagcttcctgaaccgcagggcc
cagatccctgagaacccctactcagacctggggaagatgggcaacctggggctgtttgcc
cccaacaagccccagaggaagaagggcatgctggtgaagcaggacaagatcgaggacagc
cctgagaagatctgcaccatcaaaatcccaaccatcatcatcaaggagccgtctacatcc
agcagtggtaagagcagccagggcagcagcatggagatagaaactggcgcccacgaccac
ccgggacagctccggcccgacgacggacacaaccccagcagcccctttgccacggccatg
gcgggcgccgtgcgagagcgcgagaggaggatggtggagtctcaccagaactccccatcc
tacaggttcaccgaccagggtgatgaagactcgcctcccgccccaacccctcgcctccgc
cactccaagtccatcgacgaggggatgttcagtagtgatgaacgcctgcgccgcatcatg
gccccacctgcctctctcctcaacatccccaaaggaggaggcaatgtgaccaacttcaat
acctcagagcccaacatggtgagggagccactccacacccgcacgggtcaccacagcccg
gtcagtctgccaaacaagacctacacctccagcagcggacactacgtccacccagtaact
gggaagcctctggaccctaactcccctcttgcactggctctagctgcacgggaccgggcc
atgagagagcagtcccagcctctcccactgaagactgagctacccaaacctgacctgaac
aagcctctgttcatcgacactaagctaaggactggcatggatgcgagtttctccgcgacg
gccaccatgggtcgaccaggcagggcagggcttcgcaggcagatgaccgaggccaagtac
gagacagagtccaaatacgaccacccgctggctaaagaccaggacaagagtctatcccgg
cctgagagagaagaggagaagaagaacatgttgatagacaacgtggacacgtctcagcag
aagtctgctggtctgctgatggttcacaccactgacggagccaggtctgaggagaacagc
ctgtctgagggggacagggacggggcagtgagtccggacagcacccccagcgagctccgg
gatcccaaccagcctaacacctccaaaatgtcctcccctaacccccataactcccactct
atgggccctggtcccagaggtagtaagaccatgatcaccgtcacctcagtagatgagccg
gtcaaactccccttcggcatcccccctccgccctgcgttccctctgttgacatcgacgat
gacttcttcgctgacccactgccaccgccgctggagtttgccaacagcttcgacatccca
gaggaccagaagggggcgatcgctgaactgctcaaacagcatcgaaacgctggcagagcc
ccatcgtctctagctcccttctacccccatcacggtaacaccccaagccaccctgaccag
acgatgatcaaacggcctgcagtgctcactaactgtatgccccccagcttcacccccaac
gccctggagagctacgagcctatcagtgactctgggatcgatgtggagcccgacagccgc
agtagtggagaccctcagatggagactacgagcactgtatccactgtgtccagtatctct
acgctgtcgtcagacggtggtgagatgctggacaacacttgcacagtctatgcagacgga
caggcctttttggtggaccggacctcaaagccaaaaaacaggcaacctgccgccaacaag
agtaatgcactttacaaggaccccgccttgatggatagagaagagaacctgagaactttc
ggaacgccctcctctgtcccgccacctccccccggggcatgcgtccactcagagcccccc
agaacaccaacgcaaaggacctcaaagctgtggggagacccgccaggctctaacccctat
gacatgcagaacaaggacaagacaccaaagccaggggatgggatagactcttcttcctca
ggatgtaggaccgtttttggatcaaggggtccagacggtgggtcccttgcctcaggtaca
ctgcggaataccacagtcacttttgctgcccagctcggctcgagcgtgccggccccatct
ccaaaacgagagacagagagtctcccccaccaccgagcccccagccccatcctctctcct
ccagactcaggcctcggctgtgcctcctccctccccgcaacctcccccaccctctcggat
gtgttcggcctgcccaccccccctctcagcctgggcacggggagcagccgctcaccctcc
cctctcaccctcatgcaggccgtctccaacaagccttttgccaccaagccggttctgatg
tggagcaagcacgatgtggccgactggttggagagcctaaacctggcagagcacagagac
accttcatggacaacgacatcgagggctcccatctgcccagcctgcagaaggacgacctc
atagatctcggggtgaccagagtcggccatcggatgaacatagagagagctttgaaactg
ctgatggacagatga
DBGET
integrated database retrieval system
