Oncorhynchus mykiss (rainbow trout): 110524634
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Entry
110524634 CDS
T07259
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110524634 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110524634 (taf4b)
03036 Chromosome and associated proteins [BR:
omy03036
]
110524634 (taf4b)
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110524634 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
110524634 (taf4b)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
110524634 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
DUF3124
Motif
Other DBs
NCBI-GeneID:
110524634
NCBI-ProteinID:
XP_021460152
Ensembl:
ENSOMYG00000032028
LinkDB
All DBs
Position
5:79206247..79218270
Genome browser
AA seq
815 aa
AA seq
DB search
MPTTENSANETPNQAEKSASPANSGSGTANISDTIVQVGATVKAPTPSASCPAIAPFISK
GTTKDPDPAQTQPQNANNGTQLPLSVMQVAPTTATVTVAPVQASTQPVTSSTTIKSVVSN
LPPTVVMITTGLRPISPMVAGPRVSSPTVTMSAQPPVRMSSPLGPAVTRVATATQVPGKA
AVIAIPRPTTFQQPAASIRPPQTTSVQLPANFHIPPGMVLIRSDSGQLMLVSQQALAAAQ
GLAARTPGTGTSPSPRPPTTQVSAATVVRKAENPGVIRVPPPPSPHVTTAQSTPMVKVVG
VAPTPPAGQIQIPRPMIRPVAPVTVTRSPGPGPLIIPTKPTNTPRATPPTITPEVLENVK
KCKNFLVTLIKLASSGTHSADMAKNVRELVKSLLDGRLEPEEFTDQLYRELKSSPQPYLV
PFLKKSLPAVRQLTPNPQLFIQEVDQPKPQAPATSKAPASKAPAPTAGRTPTLLSTNSRP
AHLSAASGQSIKSTQLVIQQPRGVVYKPAVTNPTPARTYLSVQNRSLAKPMVIQSGQYYN
TGAVVRRTPFLVPPPPAQRHAFKDSVGSFREEDDINDVASMAGVNVSEENARILATNSGL
VGSVERSCQDKPFLSPAPLLTHILHTGEKFGVSEVGSDVVSLVSHATQERLRDLLEKVTV
VAQHRKIALKEDYSHVQTSDVRSQLHFLEELERLEKQRRDDEERETLLRVARSRCNTDDP
DQQLLKQRAKELQQLEQAQLQHREANLTALAAIGPRRKRPLDSNGNQVGPGGIMSVLQRA
GVQRVTGVSLRDLLFCLEQDPPLRHSLTLYKGLLR
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccaccgaaaactccgcaaatgaaactccaaatcaggcagagaaaagtgcctcc
ccggcaaacagtggcagtggaacagcgaatatctcggacactattgtgcaggtgggagcg
acagtcaaagccccgacaccttctgccagttgccctgcaatagcccccttcatttcgaaa
ggtacaacgaaagaccccgaccctgcccaaacccagccacagaacgcaaataatggcacc
cagcttccgttgtccgtgatgcaagttgcacctactaccgcaaccgtgactgtcgcacct
gtccaggcaagcactcaaccggtcacgtcatccacaaccataaagtcagttgtgagcaac
ctgcctccaacggtggtcatgataaccacgggactgagacccatttctccgatggttgcg
ggaccgagagtgagctctccaacggtgaccatgagcgcacagccaccggtgcgcatgagc
tctcctttgggaccagcggtgactcgagttgccaccgcgacccaggtaccggggaaggct
gcagtgatagccataccaagaccaacaacttttcagcaaccagctgcatcgatcagaccc
ccacagaccacgtctgtccagcttccagccaactttcatatcccgccaggcatggtgctc
atccgtagtgacagtggccaactgatgctggtgtcccaacaagctttggctgcagcccag
ggcctcgcagccagaactcctggcactgggacctctcctagcccaaggccaccaaccaca
caggtgtctgcagcgactgtcgtgagaaaagctgagaatccaggtgtgatcagagtgcct
cctcctcctagcccccatgtgaccacagcacagagtacacccatggttaaggtcgtaggg
gttgctccgacccctcctgcaggccagatccagatccccaggcctatgatccgcccagtg
gcccctgtcacagtcacccgttctcctggccctggtcctctcatcatcccaaccaaaccc
accaacacccccagggccacacccccgaccatcacacctgaggtcctggagaatgtgaag
aagtgtaagaacttcctagtgacgctgatcaagctggcctctagtggaacccactctgct
gacatggccaagaacgtccgagaactcgtcaagagcctgctggatgggagacttgaacct
gaggagttcactgaccaactctaccgtgagctcaagtcttctccccagccctacctggta
ccctttctcaagaaaagtctcccagctgtgcggcagctcacccccaacccacagctcttc
atccaggaggttgaccaaccgaagccacaggctccagccacctccaaggccccggcctcc
aaagccccggcccccactgcaggccgcacccctaccctcctctccaccaactctaggcct
gcccacctcagcgctgctagtggccagtcaatcaaatccacccagctagtgatccagcag
cctagaggtgtggtgtataagcctgctgtgacaaaccccaccccggcccgtacatacctg
tctgttcagaacaggagcctggccaaacctatggtcattcagtcaggacagtactacaac
acaggtgctgttgtcaggcggactcctttccttgtcccaccgcctccagcccagagacac
gccttcaaggacagtgttggttctttcagggaggaggatgacatcaacgatgtggcctcc
atggctggggtcaacgtgagcgaggagaatgcccgtatcctagcaaccaactctgggctc
gtgggctctgtggagcgatcctgtcaggacaaacccttcctgtccccagccccgctgctc
acacacatcctccacactggtgagaagtttggagtgtccgaggtggggtcagacgtggtc
agtctggtgtctcacgccacacaggagcgtctccgagacctgctggagaaagtcacagtg
gtggcacagcatcgcaagattgccctcaaggaggactacagtcacgttcagaccagtgat
gtgcgttcccagctccacttcctggaagagctggaacgtctggagaagcagaggagagac
gacgaggagagggagacactgctccgcgtcgccaggagtcgctgtaacaccgatgaccca
gaccagcaactactgaaacaacgggccaaagagctccagcagttggagcaggctcagctg
cagcacagagaagccaacctcactgccctggctgccatcggacctcgcaggaagagacca
ctggactccaatggaaaccaggtggggccaggtggcattatgtcagtactacagagggct
ggggttcagagagtgactggggtctctctgagggacctactcttctgtctggaacaggac
cctcctctacgacactctctcactctctacaagggcctgctcagatag
DBGET
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