Oncorhynchus mykiss (rainbow trout): 110524637
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Entry
110524637 CDS
T07259
Symbol
cdh2
Name
(RefSeq) cadherin-2 isoform X1
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110524637 (cdh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110524637 (cdh2)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110524637 (cdh2)
04090 CD molecules [BR:
omy04090
]
110524637 (cdh2)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
110524637 (cdh2)
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Major cadherins
110524637 (cdh2)
CD molecules [BR:
omy04090
]
Proteins
110524637 (cdh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
DUF2304
DUF3149
DUF2254
Cytomega_TRL10
Stevor
Motif
Other DBs
NCBI-GeneID:
110524637
NCBI-ProteinID:
XP_036834383
Ensembl:
ENSOMYG00000032078
UniProt:
A0A8C7S2V1
LinkDB
All DBs
Position
5:complement(79385540..79459507)
Genome browser
AA seq
918 aa
AA seq
DB search
MFLTAGAHLMLLAAVQVAVHGGGAVGSLPRRQRSLPCTQGFSQEEYSIAVDEELREGQAL
LTVSFADCGLGDRVLLEVGDAVHFRLGEDGMVYTRHSLRLADRKRAFLVVRARDQKTKEE
WNTRVHLHLRTDGQGETTEHNKQVNSSDAAVIMFPWRSVVVRGDGSLRRVKRDWVIPPIN
VPENSRGQFPEELVRIRSDRDKNRLLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDR
EHISNFHLRAHAVDLNGNQIENPIDIVINVIDMNDNRPEFTHTIYNGSVPEGSKPGSFVM
TVTSVDKDDPKTANGMLRYKIISQNPESPSSNMFTINNKTGGIITVAAGLDREKVPQYTL
IIQATDMEGNPTYGLSNTATAIIRITDVNDNPPEFTADTFYGDVHENRVNVIVANLTVTD
KDQPHTAAWRTVYRITAGDPTGRFSIPTDPTTNEGLVTVVKPIDYEVSRSFVLTVLAENE
VALARGIHLPRQSTATVSVRIADVNESPEFSPNPKAIKLEEGLPAGSLLTTFTAQDPDRY
MLQNIRYSKLFDPANWLEIDPVNGRISTIAVLDRESPYVKNNLYNITFMASDNGIPPASG
TGTLQMYLLDINDNAPHVFPPEVEMCEKPEPNAINITASDPDLTPNAGPFAFELANRPAD
ARRNWTLTRLNGEYAQIRLRIGFLESGIYEVPIIITDSGNLPMSNTSYLRVKVCQCDHHG
DCVDMERIIAAGLGTGAIIAILICIIIMLVMVLFFVMWMKRRDKERQAKQLLIDPEDDVR
DNILKYDEEGGGEEDQDYDLSQLQQPDALEPEMVKVGIRRMDERPLHQDHLYPLRSAAPH
PGDIGDFIHEGLKAADNDPTAPPYDSLLVFDYEGSGSTAGSLSSLHSSSSGGDQDYDYLS
DWGPRFRKLADLYGGGDD
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtttcttactgcgggcgctcatttgatgctactggcagctgtgcaggttgctgtgcat
ggcggaggggccgtggggtcgttgccacggaggcagaggtcattgccgtgcacacaaggg
ttctcccaggaggagtacagtattgccgtggacgaggagctgagagagggacaagcactc
ctcactgtgagttttgccgattgcggcctgggcgacagggttctgttggaggtgggcgac
gcggtgcacttcaggcttggtgaagatggcatggtgtacacccggcactccctccgtctt
gcggacaggaagagagccttcctggtggtgcgagcgagggatcagaaaaccaaggaggag
tggaacacacgcgttcacctccacctccggacagatggacagggggagacgacagaacac
aacaaacaggtgaactccagtgatgcagctgtgatcatgtttccatggcgtagcgttgtc
gtcaggggtgatggatctctgaggcgggtaaagagggactgggtcatcccccccatcaac
gtccctgagaactcacgaggacagttcccagaggaactagtcaggatccggtcggaccgt
gataagaaccgtctcctccggtacagtgtgactggacccggtgctgatcagcctccaacc
gggatcttcatcatcaaccccatctctggtcagctctctgtgaccaaacccctcgaccgc
gaacacatctccaacttccatctgcgagcccatgctgtggacctgaatgggaaccagata
gagaaccccatagacattgtcatcaatgtcatagacatgaacgacaacagaccagagttc
acacacaccatctacaacggatcagtaccagagggctccaaaccagggtcctttgtgatg
acagtgacatcagtggacaaggatgaccctaaaacagccaatgggatgctccgatacaag
attatatctcagaaccctgagagtccttcttccaacatgttcaccatcaacaacaagaca
ggaggcatcatcactgtagcagcaggcctcgacagagagaaagttcctcagtacacactg
ataatccaggctactgacatggaggggaaccccacctacggtctgtctaacacagctaca
gctatcatcaggatcactgacgtcaatgataaccccccagagttcaccgctgacacattt
tatggagatgtgcatgagaaccgtgtgaatgtgatcgtagctaacctgacagtgacagac
aaggaccagccccatactgcagcctggaggactgtgtacaggatcaccgctggagacccc
actggacgcttctccatccccactgaccccaccaccaacgagggactggtcactgtggtc
aagcccatagactatgaggtcagtcgttcctttgtgttgacggtgctggctgagaatgag
gttgccctggcccgtggtatccacctgccccgtcagtccaccgctactgtgtctgtacgc
attgcagatgtcaacgagagcccagagttctcccccaaccctaaagccatcaaactggag
gagggactaccagccggctcgctactcaccaccttcacagcacaggaccctgacagatac
atgcttcagaacatacggtattcaaagctgtttgaccctgctaattggttggagatagac
cctgtaaatgggcggatctccaccatcgctgtgctggacagagagtctccctatgtgaag
aataacctctacaacatcaccttcatggcctctgacaatggcatcccccctgccagtggt
acgggtacgttacagatgtaccttttagacataaacgacaatgctcctcatgtcttccct
ccggaagtggagatgtgtgagaagcctgagcccaacgccatcaacatcaccgccagcgac
ccagatctgacccctaacgccggcccctttgccttcgaactggccaaccggccggcagac
gcacgacgaaactggaccctcacacgcctcaatggtgaatatgctcagatcaggctgcgg
ataggttttctggagagtggtatctacgaggttccaatcatcatcacagactcaggcaac
ctgcccatgtccaatacatcctacctgagggtcaaggtgtgtcagtgtgatcaccatgga
gattgtgtggacatggaacgcatcatcgcagcaggcctgggcactggagccatcatcgcc
atcctcatctgtatcatcataatgctagtgatggtgttgttctttgtgatgtggatgaag
aggagggataaggaacgtcaggctaagcagctgctgatcgacccggaggacgatgtcaga
gacaacatactgaagtacgacgaagagggaggaggagaggaggaccaggactatgacctg
agccagctgcagcagcccgacgcgttggagccagagatggtaaaggtgggaatcaggcgt
atggacgagagacccctccaccaggaccacctgtaccccctccgctctgctgcaccacac
ccaggagatataggagacttcatccatgagggtctgaaggcagctgataacgacccgacg
gcgcccccctacgacagcctgctggtttttgactatgagggcagcggctccaccgccggc
tccctcagctcccttcactcgtcttcctccggcggagaccaggactacgactacctcagt
gactggggcccgcgcttccgcaagctggcagacctctacggaggaggggacgactaa
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