Oncorhynchus mykiss (rainbow trout): 110524740
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Entry
110524740 CDS
T07259
Symbol
atg4c
Name
(RefSeq) cysteine protease ATG4C
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04136
Autophagy - other
omy04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110524740 (atg4c)
04136 Autophagy - other
110524740 (atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110524740 (atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110524740 (atg4c)
03029 Mitochondrial biogenesis [BR:
omy03029
]
110524740 (atg4c)
Peptidases and inhibitors [BR:
omy01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
110524740 (atg4c)
Membrane trafficking [BR:
omy04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
110524740 (atg4c)
Mitochondrial biogenesis [BR:
omy03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
110524740 (atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
110524740
NCBI-ProteinID:
XP_021460303
Ensembl:
ENSOMYG00000011095
UniProt:
A0A8C7PL98
LinkDB
All DBs
Position
5:complement(87391661..87401413)
Genome browser
AA seq
466 aa
AA seq
DB search
MENKGTDEVEKLKTKFLSAWHNVKYSWALKSKTYFSRNSPVFLLGKCYHFKADDEDSPTE
SCSTEVRDAPPATGGDDVEAFRRDFASRVWLTYREEFPALPGSSLTSDCGWGCMLRAGQM
MLAQALILHFLGRDWTWSEALALQPLDTETWTTSAAKRLVASLEASLQGERPSYPGPMLH
APGAPGRVEEADIHQREVYHRTLVSWLGDSPQAQLGVHRLVELGLVSGKRAGDWYGPAVV
AHILRKAVEEATDPGLSGITAYVSQDCTVYSADVIDSHQSCVAGGADALPLTDSRAVIIF
IPVRLGGEKTNPEYFSFVKSILSLEYCIGIIGGKPKQACYFVGFQDDSLIYMDPHYCQSF
VDVSTNHFPLQSYHCPSPKKMPFSKMDPSCTIGFYSRSVQDYQTISHELSKVLLPSANEK
YPAFTFMQGHGRDYNLSAELTPEKREWPFIRDPQRAAATAGDFVLL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaagggactgatgaggtggagaaattgaagacaaagttcttgtcagcatgg
cacaatgtgaagtacagttgggctttgaagtcaaaaacctactttagcagaaattcccca
gtgttcctcctggggaaatgctaccattttaaggctgacgatgaggatagcccaacagag
agctgcagcactgaggtccgtgatgcaccccccgccacagggggtgacgacgtggaggcc
ttccggagggactttgcgtcccgtgtgtggttgacctacagagaggagttccctgccctg
ccaggctcctccctaacctctgactgtggctggggctgtatgctgagggcgggacaaatg
atgctggctcaggccctcatactacacttcctgggcagagactggacgtggtcggaggcg
ttggccctccagcctctggacacagagacctggaccaccagtgcagccaagcgtctggtg
gccagcctggaggcctcactgcagggagagaggccctcgtacccaggaccaatgcttcat
gctccaggggcccctggaagagtggaggaggctgacatccaccagagggaggtctatcac
cgcaccctggtgtcctggcttggggacagccctcaggcacagctgggtgtccacagactg
gtggagttaggcctggtgtctgggaaacgggcaggggactggtatggccccgccgtggtg
gcacacatcctgagaaaagctgtagaggaggcaacagaccctgggctgtcgggcataact
gcttatgtctcccaggactgtacagtttacagtgctgatgtcatcgatagccaccagtcg
tgtgtggctgggggagcagatgccctgccccttactgacagccgggcggtcatcatcttc
atcccagtccgactggggggagagaagaccaacccagagtacttcagctttgtcaagagc
atattgagtctggagtactgtattggtatcatcgggggcaagcccaaacaggcctgctac
ttcgtgggctttcaagatgacagcttgatttacatggaccctcattactgtcagtctttt
gtggatgtcagcactaaccatttccctcttcagtcgtatcattgcccgtcgccaaagaag
atgcctttcagtaagatggaccccagttgtaccataggcttttactctagaagtgtccag
gactaccagacaatcagccacgaactgtccaaggtgttgctgccgtcagcgaatgagaaa
tacccagcattcactttcatgcaaggtcacggaagagattacaacctttcggcggagttg
accccggagaagagggaatggccgtttatccgtgacccacagagagcagccgctaccgct
ggagacttcgtgctgctctga
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