Oncorhynchus mykiss (rainbow trout): 110524759
Help
Entry
110524759 CDS
T07259
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110524759 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110524759 (prpf38a)
Spliceosome [BR:
omy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110524759 (prpf38a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
110524759
NCBI-ProteinID:
XP_021460341
Ensembl:
ENSOMYG00000030755
UniProt:
A0A060YLM5
LinkDB
All DBs
Position
5:88412848..88417848
Genome browser
AA seq
312 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMALKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFELQHVDEFIDELLHSERMCDIILPRLQKRQVLEEAELLDTR
ISALEEDLDEVETSDEEDEEDEEEEKPERVQTPEPHRRSYRDNDRPRRSPSPRYRRSRSP
RRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSKSPGHHRSHRHRSHSKSPERSS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataggactgttaaagatgcaaacagtatacatggaacaaatccacaatacttg
gtagagaaaattattcgtactcgaatttatgaatcaaaatattggaaagaagaatgcttt
ggactgactgccgaacttgtcgttgacaaagccatggcgttgaagtttgtcggaggagtc
tatggaggaaatatcaaacctacaccgttcctgtgtctcactctgaagatgctacagatt
cagccagaaaaagacatcattgtagaattcatcaagaacgaggatttcaagtatgtccgc
ttgctaggggcaatgtacatgaggttgactgggacatcagtggattgctacaaatacctg
gaaccactgtacaacgactaccgaaaaatcaagagtcagaaccgaaatggagagtttgag
ctgcaacatgtagatgagttcattgatgaactgctacactctgagagaatgtgtgacatc
atccttcccaggcttcagaaaaggcaggtccttgaggaggcggagttattagacacacgc
atcagcgccctagaagaggacctggatgaagtggagaccagtgacgaggaagacgaggaa
gacgaggaagaggaaaagccagagagagttcagaccccagagccccacagacggagttac
cgggacaacgaccgccctcgccgttcgccctctccacgctacagacgcagccgttcaccc
agacggaggagcagatcacccaagagacgaagcccatcccccagacgagagcgccaccgc
agcaaaagtccccgtcgccaccgcagccgctcccgagagagacgtcaccgctcaaagtcc
ccaggccatcacagaagccacaggcatcgcagtcactccaaatccccagagagaagttca
aaaaagagccacaagaagagtcgaagagggaacgagtga
DBGET
integrated database retrieval system
