Oncorhynchus mykiss (rainbow trout): 110524821
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Entry
110524821 CDS
T07259
Symbol
ncbp2
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03015
mRNA surveillance pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110524821 (ncbp2)
09122 Translation
03013 Nucleocytoplasmic transport
110524821 (ncbp2)
03015 mRNA surveillance pathway
110524821 (ncbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110524821 (ncbp2)
03041 Spliceosome [BR:
omy03041
]
110524821 (ncbp2)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
110524821 (ncbp2)
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
Cap binding complex
110524821 (ncbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_5
Motif
Other DBs
NCBI-GeneID:
110524821
NCBI-ProteinID:
XP_036834733
UniProt:
A0A060YLU4
LinkDB
All DBs
Position
5:92632817..92634901
Genome browser
AA seq
155 aa
AA seq
DB search
MSIKLNALFSDSYVDVSQYRDQHFKGNRYEQEKLLKQANTLYVGNLSFYTTEEQVYELFS
KSGDVKRIIIGLDKVKKTACGFCFVEYYTRTDAENAMRFVNGTRLDDRIIRTDWDAGFKE
GRQYGRGKSGGQVRDEYRQDYDPARGGYGKVVSRP
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgtctattaaattgaatgcgctattcagcgactcctacgttgatgtaagccaatacaga
gaccaacattttaagggaaatcgatatgagcaagagaaactgttgaagcaggctaacaca
ctctacgtgggtaacctgtccttttacaccacagaggaacaagtgtacgagctcttctcc
aagagcggggacgtgaagagaataatcatcggcctggataaggtgaagaagacggcgtgc
ggcttctgcttcgtcgaatactacacgcgtacagatgctgaaaatgccatgaggtttgtc
aacgggacacgtctggatgaccgcatcatcagaactgactgggacgctggttttaaagaa
ggcaggcagtacggtcgtggcaagtccggtggtcaggtcagagacgaatacagacaagat
tatgacccagcccgggggggctatgggaaagttgtctctcggccataa
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