Oncorhynchus mykiss (rainbow trout): 110524828
Help
Entry
110524828 CDS
T07259
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110524828 (hps3)
Membrane trafficking [BR:
omy04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
110524828 (hps3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
110524828
NCBI-ProteinID:
XP_036834691
Ensembl:
ENSOMYG00000011182
LinkDB
All DBs
Position
5:92968501..93001381
Genome browser
AA seq
1086 aa
AA seq
DB search
MVHVYNCHPFASQQIVPTEQEPGLVCCGGGALFVVSAGGCKIEAFQLGEEGCPLICRFAT
MGTVQSILHSEIGDYLVTIEEKNNAPYLRAYTNWRYQAAEKTRVGVRLLGHFLRGSSMRG
APKEQMEIIEIPLFERPLCVACCGVTGDLLVGCPKSLVLFSLKRQALNDKLSILDFERCL
IIHLPGLSPQQVGMDVAICAGYIAMQTELEVLVVKLERLPGAAFTQKSADKKPQDHSLVP
QDMITGAEHDNETGCVYTVLYSPEGRREGLAGHRDHDDFFIFPKHQELLGDRAKDCGVKI
SLEWTGMESEARGNLIITYILYRRFAPDFFQDCSVEETHLHSLQFHPVFTSNQEVCVEGG
RGVEPTCLFCFFSLPKTGYLYSVRGGVQMVSAYQYPEKAQQAVLSDLFLHIITKNALQCF
SVRCAAVAARAEDPYIDTTMKACPPVTMELCALRIQQFIGLKALCHYRHHVVLLTTADVE
TREDTERTARRVIEYKDHKTLRGIFLAVGIEPSTTPALKHFLAHSFLNRKSPFTKPQNPS
EMGHGWNLYVVNTVPPLQLYNEMVEYSKTYEETNPLSHSRLHLLSEAHLLLRATLLDPRV
GNPVERPQTTGQNLAQALGYNTTRTADRQELQQAFQESCAQLGDCFSRFDKRDCHLALPY
YKMSGLSLTEVISRNRGLSNSLCGYGKGFLFFLKHSLYEETLELLTEETANEVLDIFGVA
EPSQLPHVIASPSMARASPDCGLAHLERLESIGAPSVPLTLSKAALALRMADLQLYRQHM
DRHTEMLQVYGFIEEAKLLLHGRGDTVVPTLLARHLRDNQDGLLVAAMVALHENDKVKLD
EADLFFQELCGDVSGPQGGPQLLVDFWEALLMASSQEAVIQELLFRLTAVYIDRVTRRDG
RGFKPLKSADDLINWCSHYGVLYPWVSILTPAHFNIIPEDLHKLQSLLCGPTLDVSSILP
LLEQLPDEDNAGLSVHVLCATKLGHYESSIERLLDRCPQAIIPYANHELQNNNMALWWQK
LFPELCERTRATQGENTILLAALKETLVVVAMELNPLELLDLLPDDGTVHFFLPHLLECS
QRNLMM
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgtatacaactgccaccccttcgcgtcccagcaaatcgtgccaaccgagcag
gaaccggggttggtgtgctgtggcgggggtgccctattcgtggtgtccgctggaggatgc
aagatcgaggcttttcaactgggagaagaggggtgtcctctcatctgccgcttcgccact
atggggacagtgcagagcatcctacacagtgagataggggactacctggtgaccatcgag
gagaagaacaacgccccctacctacgcgcctacaccaactggcgctaccaagcggctgag
aagacccgcgttggcgtgcgtctgctcggtcatttcctgcgcggctcgtccatgcgcggg
gctcccaaggagcagatggagatcattgagattccactgtttgagcgtccgctgtgtgtg
gcgtgctgtggggtgaccggagacctgctggtggggtgtcctaagagcctggtgctgttc
agtctaaagagacaggccctcaacgacaagctctccatcctggactttgagcgctgtctc
atcatccacctcccgggactgtcgccccaacaggtagggatggatgtggcgatctgtgca
gggtacattgcaatgcagacagagctggaggtgctggtggtcaaactggagagacttcct
ggtgctgcttttacccagaagtcagctgacaagaagccccaggaccacagtctggtcccc
caagatatgatcactggagcagaacacgacaacgagacgggttgtgtttacactgtgttg
tattcgccagaggggaggagagagggtctggctggtcaccgtgaccatgatgacttcttc
attttccccaagcaccaagagctcctgggggacagggctaaggactgtggggtcaagatc
tccctggagtggacaggcatggagagtgaggccaggggcaacctcatcatcacctatatc
ttatacaggcgttttgctccagacttcttccaggactgtagtgttgaggagacccacctg
cactccctgcagtttcacccagtgttcaccagcaaccaggaagtatgtgtggaggggggt
agaggggtggagccgacgtgtttgttctgtttcttctcgctgcccaagacgggctatttg
tacagcgtgaggggcggggttcagatggtctcagcctatcagtatccagagaaggcccag
caggccgtcctctctgacctcttcctccacatcatcacaaagaatgctctccagtgcttc
tcagtgaggtgtgcagcagtggcagccagagctgaggacccttacatcgataccaccatg
aaggcctgtcctcccgtcaccatggagttgtgtgctctgcgtattcagcagttcattggt
ctgaaggctctgtgtcactaccgacaccacgtcgtcctgctgaccactgcagatgtggag
accagggaggacacagagaggaccgcacgcagagtcatagaatacaaagatcacaaaacc
cttagggggattttcctagcagtaggtatagagccttccaccacgccggctctgaagcat
tttctggcccactccttcctgaacaggaagtcacccttcaccaagccccagaatcccagt
gagatgggtcacggctggaacctgtacgtggtcaacaccgtcccccccctccagctctac
aacgagatggtggagtacagtaagacgtatgaggagaccaaccctctgtctcacagccgt
ctgcacctgctcagtgaagcccacctcctcctgagagccacgctcctggacccccgggtt
ggaaaccctgtagaacggcctcagaccactggtcagaacctagcccaggccctgggatat
aatacaacccgcaccgcagacagacaggagctgcagcaggccttccaggagagctgtgcc
cagttaggagactgcttcagcaggtttgataagcgggactgccacctggccctgccctac
tataagatgtcaggcctgtctctgacagaggtgatctccaggaacaggggtctgtctaac
agcctctgtggctacgggaagggctttctcttcttcctcaaacactccctctatgaggag
accctggagctgctcactgaggagacggccaacgaggtgctggatatcttcggtgtggcc
gagccgtcccagcttccccatgttatagccagcccttccatggccagagctagccctgac
tgtggcctggcccacctagagcggctggagtccatcggagccccctccgtacccctcacc
ctgtccaaggctgccctggccctgcgtatggcagacctgcagctctacaggcaacacatg
gaccgacacacagagatgctgcaggtgtatgggttcatcgaggaagccaagctgctgctg
cacggcagaggggatacggtggtacctactctcctggctcgtcacctcagggacaaccag
gacggcctgctggtggcagccatggtggcgctgcacgagaacgacaaggtcaaactggac
gaggctgacctcttcttccaggagctgtgtggggatgtgtcagggccccagggaggccct
cagctgctggttgacttctgggaagccttgctgatggcctcgtcacaggaagccgtcatc
caggagctgctgttccgcctcaccgctgtctacatcgatcgcgtcacacgccgagacggc
cgtggattcaaaccgctcaagagcgcagacgacctgattaactggtgttcccactatggt
gtgttgtacccctgggtcagcatcctgactccagctcacttcaacatcattccagaggac
ctccacaaactacagtccctgctgtgcggtcccaccctggacgtgtcatccatcctgccc
ctgttggagcagctgcctgacgaggacaacgccgggctcagtgtgcacgtgctctgtgcc
accaagctgggtcactacgagagctccatcgagaggttgctagaccgctgtcctcaggcc
atcatcccttatgctaatcatgagctgcagaacaacaacatggctctgtggtggcagaag
ctgttccccgagctgtgtgagagaaccagagcaacacagggagagaacaccatcctgctg
gctgcactcaaagaaacgctggtggtggttgccatggagctgaaccccctggagttgctg
gacctgttgcctgacgacgggacggtccacttcttcctgcctcacctgctggagtgcagc
cagagaaacctcatgatgtga
DBGET
integrated database retrieval system
