Oncorhynchus mykiss (rainbow trout): 110524839
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Entry
110524839 CDS
T07259
Name
(RefSeq) rho guanine nucleotide exchange factor 18 isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110524839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110524839
Membrane trafficking [BR:
omy04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
110524839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
PH_13
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
110524839
NCBI-ProteinID:
XP_036834737
LinkDB
All DBs
Position
5:complement(93300490..93412367)
Genome browser
AA seq
1544 aa
AA seq
DB search
MADSPLNNSWPSFSKLWMKRWSFKRGSEGKPCSTLQPCVSASEASSLSSSLSPASVAKDV
FFNIATEEKDDESDYENPSLDEDVDSSVEDLLGLSCSFIDSNYYKDHQGVHSVSAAPETS
PSTLGFPSRYSDSPQHSSQLHPNPHPYPHPYPYPYQETENKSIPHHTIVVTQFNPNLLQS
GSAMDGYNSESVDPVDPVGVVSTMVNLNGPGGQGDMMDSDRESFPILIRSMSTSRRHSLG
MPMSPIDLGRRLSLDAIDSDGERDDSLLRSSHLQAFIYPGCPEQEVEESDGTDLSRSEAK
ETETEEYSRSGRTYSRTEILATDEHIHVAHVSHVVETSKRAAGEELDPEEPNLHTAEGQT
HMLMIQKVLQELKQYHGARQRTTRPEGKETGSSVTWYEFLSNENEEEEDRTEKVEKGTKV
KRTLSSLRSRMTGSFNKDKQDCAVNVHKSCRTLLAECNSSKNKKDSLHRTSTTASPNLAL
RDRDQSSSALDCPSGSPRIPGMTLTPRGPSAQPASAAFNSSSSSHTAAASLNHSHNSHTG
SLSGDMDEPDSLRSGLRRFNEDAVSLAPSTTDSIVVEDAYYSAFRADLESDAQDLEVESW
SLAVDQHYLKKYTKETVKRQDVIYELMQTEMHHVRTLKIMLRVYMRELKEHLQMDELFPR
LESLLELHTSFLSRLKERRRDSTQPGSDRNYNIQRLADILTTQFSGEKGDRMKENYGDFC
SHHTEAVSYYKEQLHNNKKFQNLIRKVNNLSVVRRLGVTECILLVTQRITKYPVLVERIV
QNTEVGTEEHEELTRSLSLIKDCIVQVDAMVNLHEKASRLRDIAHKMEPKSLGKIKDGRV
FHREDLSQGRRRLLHEGTANHKAASGRLKDIVAVLLSDVLLLLQDKDQRYVFSTVDNKPS
VISLQKLIVREVAHEERAMFLICASSNEPEMYEIHTASKEERNSWMTHIRQAVESCPHTE
ERLFSEQEEARAARFNEFQERLRQKDSQIVTLLTEKLQLFSDMCLVSGHEDTSFRSRLML
RGDASDLHQGETLLKGTITDVESLQNLLLSGVREPASRLEEGSGSGALPRRADTFGGYDS
RPIILNKSIVKKKNHSGGDRARDETQKGCSDPQLTKIQASQTLEQPQADDDEEEASPATW
SPIWSNTFPEAEFFDRVLMLSQRLYSLQAIIAKQDSHIELQRASLTERASFPGRHRGNVL
LEQEKQRTLALQREELASFHKLQSQHRQEQARWERERERHRLQAEVTEGMLRQREDDCRR
LEEKLAEEREDLERQRETYQQDLERLRESTRTVEKEKERLEQQRKIKRKTIEVMPFSGSL
NGDLLLGVGSSCSVGSDLSLPQKALVRSSPSVAPADYLERPEVLARGQSANATALPVKKE
VPLHLCSTTNQQHKQVGVQQQIPTKLAALSSKSSKSAKATHRTDSTASLDMKQMLPMKLS
AKEDGTLKAKRSISPNQQLPHTLVHSQSMHLTVSSSLPDRGPENQPAGLQKPPSQASNPL
HIHTQPQAPNPLHTQSPNPPPAQAPVHSHSLPPPCRIPEDVIFF
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atggcagattctcccttaaacaactcctggccttctttctccaaactctggatgaaacgt
tggtccttcaagagaggatcagaaggtaagccatgttctaccctgcagccctgtgtgagt
gcctcagaggcatcctccttgtcctcgtccctgtccccagcctccgtcgctaaggacgtc
ttcttcaacatcgccactgaggaaaaggatgatgaaagtgactatgagaacccaagcctg
gatgaggatgtagacagcagtgtggaggatctgctgggtttaagctgttccttcatagac
tcaaactattacaaagaccatcaaggggtacactccgtatcggctgccccagaaaccagc
ccttctaccctgggctttcccagtagatatagcgacagtccccagcacagctcccagctc
catcccaatccacatccctatccacatccctatccatatccctatcaagagactgaaaac
aaatccataccccatcacactattgtggtcacccagttcaaccctaacctgttgcagtca
ggcagtgccatggacggctataacagtgagtcggtggaccctgtggaccctgtgggtgtg
gtgagcactatggtgaatctgaatggaccaggaggacaaggagacatgatggattctgac
agagagagcttccctatcctgatcaggtccatgtctacatcacgcagacacagcttgggc
atgcccatgtctcccatcgacttggggaggaggctgagcctggacgccatagacagcgat
ggagagagggatgactctctcctccgctcctcccacctacaggcgtttatatacccagga
tgccctgagcaggaagtggaggagtccgatgggacagacctctccagatctgaagccaag
gagacagaaacggaggagtacagtcggtctggaaggacatactccagaacagagattctg
gccacagatgagcacattcacgtcgcacacgtgtctcacgtagtggagacatcgaagagg
gcagcaggagaggagctggacccagaggaacccaacttgcacactgcagaaggacagact
catatgctgatgatacaaaaagttctgcaagagctcaagcagtaccacggagccaggcag
aggaccacaaggccagaggggaaggagactggaagtagtgtcacctggtatgaatttctc
tccaacgaaaatgaggaagaagaggaccgaacagagaaagtggagaaggggaccaaagtg
aagcgcaccctgagctcgcttaggagcagaatgactggctcattcaacaaagacaagcag
gactgtgcagtgaacgttcacaagagttgtcggacgctactagctgagtgtaacagcagc
aagaacaagaaggattctctgcataggacctccacaacagcgtcgccgaacctcgccctg
agggatcgggaccagtcttcttcggcccttgattgcccctccggttctccgcgcatccca
ggcatgaccctcaccccgcggggacccagtgctcagcctgcctcagccgccttcaacagc
tcttcctccagccacactgctgcagccagcctcaaccacagccacaacagccacaccgga
tccctctcaggggacatggacgaaccggacagcctacgctccggtctcaggcgcttcaat
gaggacgccgtctccctggccccatccaccactgactccatcgttgtagaagatgcgtac
tactctgcatttcgagctgatctggagtctgatgcccaggacctggaggtggagtcatgg
agtctggctgtggaccagcactacctgaagaaatacaccaaggagacggtcaagagacaa
gacgttatctacgagctgatgcagacagagatgcaccacgtacggaccctgaagatcatg
ctgcgtgtttacatgagggagctgaaggagcacctccagatggacgagctgttcccgcgc
ctagagagcctgctggagctgcacacaagcttcctgtcccgcctaaaagagcggcgccga
gactccacgcagcccggcagcgacaggaactacaacatacagagactcgctgacatcctc
accacacagttttcaggtgagaaaggggatcggatgaaggagaactatggtgatttctgc
agccaccacaccgaggctgtcagctactacaaggagcaactacacaacaacaagaagttc
cagaacctcatacggaaagtcaataatttgtccgttgtgagaagattaggagtgactgag
tgtatcctcctggtgacacaacgcatcaccaagtaccctgtgctggtagaacgtattgtg
cagaatacagaagtgggtacggaggaacacgaggagttgaccaggtctcttagtctgatt
aaagactgcatcgtccaggtggatgccatggtcaacctgcatgagaaggcctcgcgactc
cgagacatcgcccacaagatggagcccaagtccctcggcaagatcaaagatggccgtgtg
ttccacagagaggacctgtcccagggtcgacgcaggctgctgcacgaggggacggccaac
cacaaggccgcctccggcagactcaaagatattgtggctgtgctgctgtccgacgtgctt
ttgttactccaggacaaggaccagagatatgttttctccacagtggacaacaagccctca
gtgatctccctccagaagttgatagtgagggaggtggcccacgaggagagggccatgttc
ctgatctgcgcctcctccaatgagccggagatgtacgagatccacaccgcctccaaggag
gagcgcaactcctggatgacacacatccggcaggccgtggagagttgtccacacactgag
gagagacttttcagtgagcaggaggaggctcgagccgccagattcaacgagttccaagag
cgtctgagacagaaggactctcagattgtgacgttgctgacagagaagctgcagctgttt
tcagacatgtgtctggtgtctggtcacgaggatacgagctttcgctcccgcctaatgctg
cgaggtgacgcctcagacctccaccagggggagacactgctcaaggggaccatcactgat
gtggagagtcttcagaacctgttgctgtctggtgtgagagagccagcttcacgtctagag
gagggttcaggatccggggctctgcccaggagagcagacaccttcgggggctatgacagc
aggcccatcatcctcaacaagagcattgtgaagaagaagaaccacagtggaggggacagg
gccagagacgagacccagaaaggctgctctgacccccagcttacgaagatccaggctagt
cagaccttggagcagccacaggctgatgatgatgaggaagaggcctctccagccacctgg
agccccatctggtctaacaccttccctgaggctgagttctttgaccgggtgctgatgctg
tcccagagactctacagcctgcaggccatcatcgccaagcaggacagccacatcgagcta
caacgcgcctccctcaccgagcgcgcctccttccctggccgtcaccgcggcaacgttctc
ctggagcaggagaaacagaggacgctggccctgcagagggaggagctggccagcttccac
aagctgcagtcacagcaccgtcaggagcaggctcgctgggagagggagcgggagcgccac
cggctgcaggccgaggtcacagaagggatgctgaggcagagagaggacgactgcaggagg
ctggaggagaagctggcggaagagagggaggacctggagagacagagagagacgtaccaa
caggatctggagagactgagggagtcgacccgcacagtggagaaggagaaggaacgcctg
gagcagcagaggaagatcaagaggaagaccattgaggtgatgcccttctctggcagtcta
aatggggatctccttctgggcgtgggcagtagctgcagcgtcggctcagacctctccctc
ccccagaaggccctggttcgttctagcccttctgtggcgcccgcagactacctggagcgt
cctgaggttctggctcggggtcagagcgccaacgccacggcgctgccggtgaagaaggag
gtgcccctccacctgtgcagcaccaccaaccagcagcacaagcaggtgggtgtccagcag
cagatccccaccaagctggcagccctgagctcaaagagttcgaagagtgccaaggccacc
caccgcaccgacagcacagcctctctggatatgaagcaaatgctgcctatgaagttgtca
gccaaagaggacggcactctgaaagccaagcgctccatcagccctaaccagcagcttcct
cacaccctagtccactcccagtccatgcacttgacagtttcatcgagccttccagacagg
gggccagagaaccagcccgccggcctacagaagccccccagccaggcctccaaccccctg
cacattcacacccagccccaggctcctaaccccctccatacccagagccctaacccccct
ccagcacaggcccctgtccacagccacagcctgcccccgccatgcaggatccctgaggat
gtaatcttcttctga
DBGET
integrated database retrieval system
