Oncorhynchus mykiss (rainbow trout): 110524869
Help
Entry
110524869 CDS
T07259
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04080
Neuroactive ligand-receptor interaction
omy04082
Neuroactive ligand signaling
omy04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110524869
04082 Neuroactive ligand signaling
110524869
04519 Cadherin signaling
110524869
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110524869
Ion channels [BR:
omy04040
]
Ligand-gated channels
GABA-A
110524869
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
BACK_BTBD8
Motif
Other DBs
NCBI-GeneID:
110524869
NCBI-ProteinID:
XP_036834882
UniProt:
A0A8K9X7M6
LinkDB
All DBs
Position
5:complement(98839500..98912350)
Genome browser
AA seq
477 aa
AA seq
DB search
MGDGMRGVFSGMGDGMRCCGCAMSKVWVFVLLVSVTCRLSLSQTPAVTTTEPLKEAELND
NITIFTRILDRLLDGYDNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSW
KDERLRFQGPMKMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYT
MRLTISAECPMQLEDFPMDAHACPLKFGSYAYPVSEVVYSWTQGAAKSVVVAEEGSRLNQ
YHLIGQTAGTEDIYTSRGQYTVMMCHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRE
SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYF
TKRSWAWDGKKAMEDTRKKNPTALSKKPNNTCSAGVSYTPNLTKDNAISTISNSADIQLK
LAEVKTPDPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGAVNPYT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgggatgcgcggtgtgttttcaggcatgggtgacgggatgcgctgctgcggc
tgtgctatgtccaaagtctgggtcttcgtcttgctagtgagcgtcacctgccgtctgagc
ctttcccagaccccagcagtaaccactacagaacccctaaaagaggcggagctaaatgac
aacatcaccatctttacccgaatactggacagactgctggacggctatgacaacaggcta
cgtcctggtctgggagagaaggtgaccgagatcaagaccaacatattcgtgaccagcttc
ggtcccgtttctgatactgaaatggagtacaccatagatgtgttcttcagacagagctgg
aaggacgaacgtctgcgtttccaaggccccatgaagatgttaccgctaaacaacctcctg
gcgtctaacatctggaccccagacaccttcttcctcaacgggaagaaatctatcgcccac
aacatgaccacgcccaacaaacttctccgactcaaagacgacgggacactgctctacact
atgaggttaaccatctcagcagaatgccccatgcagttagaggacttccccatggatgcc
cacgcctgtcctcttaagtttggaagctatgcgtatcctgtgtctgaggtggtgtattcg
tggacccagggagcagccaagtcagtggtggtggcagaggaggggtcacgactcaaccag
tatcatctgataggacagaccgctggcactgaggacatctatactagcagaggtcagtac
acagtgatgatgtgtcacttctatctgaagaggaagatcggctatttcgtcatccagacc
tacatgccctgcttcatgaccgtcatcctctcccaggtgtccttctggctcaaccgcgag
tctgtccccgccaggactgtcttcggtgtgaccaccgtgctgaccatgaccactcttagc
atcagtgcccgtaactctctgcccaaggtggcgtatgccacagccatggactggttcata
gcagtctgttatgccttcgtcttctctgctcttatcgagttcgctaccgtcaactacttt
accaagaggagctgggcctgggatgggaagaaagccatggaggatacgcgtaagaaaaac
cctacggctctgtccaagaaacctaacaacacctgttcagctggggtcagctacactccc
aacctgactaaggacaatgccatctccaccatctctaacagcgcagacatccagctgaaa
ctggctgaggtcaagacccccgaccccaaaaagacttacaacagcgtcagcaagatcgac
aagatgtcccgtatagtgtttcctgttctgtttgggacattcaacctggtttactgggct
acgtacctcaacagggaaccagtgatcaaaggagctgtgaacccctatacatag
DBGET
integrated database retrieval system
