Oncorhynchus mykiss (rainbow trout): 110524871
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Entry
110524871 CDS
T07259
Name
(RefSeq) ephexin-1 isoform X1
KO
K20687
Rho guanine nucleotide exchange factor 15
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110524871
Membrane trafficking [BR:
omy04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
110524871
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
SH3_9
SH3_1
SOS1_NGEF_PH
PH
RHG20_PH
ECT2_PH
Motif
Other DBs
NCBI-GeneID:
110524871
NCBI-ProteinID:
XP_036834809
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Position
5:95735328..95776796
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AA seq
743 aa
AA seq
DB search
MHPKVCMGTENTSGLLPTSLLPKGPFPYRVPPKPQPRRERWHWATDTVTVLNRNTCTGEA
GDHGQEKGQLTRNKSIAPLINSQGDCISSEVMTSGSSRIQSASSMTPAEEQWASIGFTPV
PKPRLIVGPTPAEEQWASIGFTPVPKPRLRVGPTPAEEQWASIRFTPVPKPRLRVGPTPA
EEQWASIRFTPVPKPRLRVGPTLNPHSRDSGLAAGHMEEPLCLRTNPVQRLPPPNKPLPT
LKRNGIVQRMVHTNTENRNSGSMVVIDTEGSGADLHYAQLPRGSRERLNTAVTDKLNANC
RERNGLLETLWQERKLVQESGILPYLNKQELLLQESMYEVVTTEQSYLERLGVAVNHFMK
SSTLRLALSPRDHKSLFSSIAKIREISQNFLDVMREELESNLLCDMLCDVIHRHTSSHFG
VYVDYIRNMPYQEQTMHNLGRENPQIMEILRELQDDQRCYRLPLKSFLVLPFQRITRLKI
LIEVVEACNREVGRMKMMEEIVHIANKTEFECKALLLVSSSRWLVRQGQLAQLSEKENIF
GHRKLCHIYLFLFNDLLLVTTRKGMDRFVVRDHVHRSLIEVSEGLEEKEDLVCASWERMF
CLALLKNQRGTTSQFLLQASTQAEKITWMEVLSHRVDGMEGIYEEWDCPQVRCTEVYVAQ
QPGELSVQLGDTINVIQKTADGFLEGRRLADGERGWFPDYCAVQVTNEYVQRKHLRQRYH
VLQTANRILNRRHTVPQATACFR
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcatccaaaggtatgcatgggtactgagaacacatcagggctcctaccaacctctcta
cttcctaaaggcccatttccctaccgggttccacccaaaccccagcccagaagggaacga
tggcactgggccacagacactgtaactgtcctgaacaggaacacctgtacaggtgaagca
ggggaccatggtcaggagaagggacaactgaccaggaacaagtccatagcacctctcatc
aatagccagggggactgtatttcgtctgaagttatgacctctggctcttccaggatccaa
tctgcatcttcaatgacaccagcggaggaacagtgggcttccatcggattcacacctgtt
ccaaagcctcgtctcatagtcggaccaacacctgcagaggaacagtgggcttccatcgga
ttcacacctgtaccaaagcctcgtctcagagtcggaccaacacctgcagaggaacaatgg
gcttccatcagattcacacctgtaccaaagcctcgtctcagagtcggaccaacacctgca
gaggaacagtgggcttccatcagattcacacctgtcccaaagcctcgtctcagagtcgga
ccaacacttaacccacacagcagagactcaggtctggcagcaggacatatggaggagccc
ttatgcttacgtaccaaccccgtccaaagacttcctccccctaacaagcccctcccaact
ttaaaaagaaacggtattgttcagagaatggtccacacgaacactgagaacagaaacagt
ggatccatggttgtcattgacactgagggctcaggagcggatttgcattatgcacagctt
ccaagaggcagccgggagaggctgaacactgctgtgacagacaagctgaacgcaaactgc
agagagagaaacggtttattagaaaccttgtggcaggaacgcaaactggtgcaagagagc
ggaatactgccgtacctcaacaagcaagagctgctgctacaggagagtatgtatgaggtg
gtgacgacagagcagtcctacctggagaggctgggtgtcgctgtgaaccatttcatgaag
tcatctaccctgcgtctagccctgtcacccagagaccacaagtcccttttctctagtatt
gccaagatcagggagattagccagaactttctagacgtaatgagggaggagctggagtct
aacctgctttgtgacatgttgtgtgatgtcatccatcgccacaccagcagccacttcggt
gtctatgtggactacatccgtaacatgccttaccaggaacagaccatgcacaacctgggg
agggagaacccccagatcatggaaatattaagggagctacaagatgaccaacgctgttat
cgtctgcccctgaagtccttcctggtccttccctttcagaggatcacacgactcaagatc
ctcatagaggtagttgaggcctgcaatagggaggtggggaggatgaagatgatggaggaa
atcgttcacatcgccaacaaaactgagtttgaatgtaaggccctgctcctggtgtcttcc
tctcgctggctcgtcagacaggggcaactagctcagctgtcagagaaagaaaacatcttt
ggtcaccggaaactctgtcacatctatcttttcctcttcaatgacttactgctggtgacc
accaggaaaggcatggatcggtttgtggtgcgggatcatgtccaccgttccctgatagag
gtgagtgaaggactggaggagaaggaggatttggtgtgtgcttcatgggagaggatgttc
tgcctcgctctgctgaagaaccagaggggaacaacatctcagttcctgctgcaggcctcc
acacaggcagagaagataacctggatggaggtgttgagccatcgagtggacgggatggaa
ggaatctatgaagaatgggactgtcctcaggtacgatgcactgaggtctacgtagcacag
cagccaggggaactgagtgtacagctgggtgataccatcaacgtcatacagaaaactgct
gacggtttcctagagggcaggagacttgcggacggtgagcggggctggttcccggattac
tgtgcggtgcaggtcaccaatgagtacgtccagaggaaacacctcaggcagcgctaccat
gttttacagactgccaaccgcatcctgaaccgacggcacactgttccccaggcaactgcc
tgcttcagatag
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