Oncorhynchus mykiss (rainbow trout): 110524913
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Entry
110524913 CDS
T07259
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110524913 (chd1l)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110524913 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
LIG3_BRCT
SWI2_SNF2
AAA_22
Torsin
SLFN-g3_helicase
ERCC3_RAD25_C
Selenoprotein_S
Motif
Other DBs
NCBI-GeneID:
110524913
NCBI-ProteinID:
XP_036834930
LinkDB
All DBs
Position
5:complement(100671950..100722515)
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AA seq
1060 aa
AA seq
DB search
MASFHQKIKTSVPEETKSSLTEKDLQKWGLQGIQLRAYQLDGVQWLTQCLANQQGCILGD
EMGLGKTCQTISLLLYMRGALRQDGPFLVLSPLSVMDNWRSEMECLSPCLKVLCYYGDKD
KRAELQRDMNNTHYHVLLTTYELCIKDASFLKRRKWKVLVVDEAHRLKNQNSLLHKILME
FSLDFRVLLTGTPIQNNLTELYSLLSFIQPSLFPTDQTEDFTSTYNQVQTQPTLASDLQR
VLQPFLLRRVKAEVAADLPMKTEILMYHGLSALQKRYYKAILMKDLYAFGNEQGNKTRLL
NILMQLRKCVDHPYLFDGVEPEPFEMGEHLIQASGKLCLLDSMLAYLHQGGHHILLFSQM
TRMLDILQDYMEYRGYRYERLDGSVRGEERNLAIKNFSSKDVFVFLLSTKAGGVGMNLTA
ADTVIFIDSDFNPQNDLQAAARCHRIGQTRAVKVIRLLGRDTVEEIVYSRASSKLSLTNT
VIEEGRFSLLNHTHSAAAGLQLSEILKFGVDKLLSSEESSIQAVNMGLILGQSRDGEWLT
DEAPTQTKDLPTEEEEEGESEGQNHMYYFEGRDYSREVSSEDQRTFSRLLEEEAGGGGGE
RRATRHNDEVCLSGPMLAPMRKRKALTETDLKEREEAAAKRARVQEDKRRRLQENKHRKK
MVWWESSGYRSLCLPSVESEEEEEADDLSVTSTDSEHSAISYVLGDVTHPYANQEDAIIV
HCVDDSGRWGRGGLFTALENRSDAPCKQYELAGKMKDLELGSVLLFPVDDKQSRLDGQDQ
VALIVAQQRARDNSLSGIHLSALEEGLQKIYRVAKTNKASVHLPRIGHSTRGFNWYGTER
LIRKHLASRGVHTSIYYYSRSVSTSALGTSTTPSTASASTSKASASSSKTSAASPSPSSV
SPSPTTVSVSPSPPHSPPVPQYPGPDSDRESEEGETANQSSDRGIEERETANQSSRTPSP
SGPALPDFMRGVHVFFYNLTASDRKRLARYLITYEGDEEEIMSSEVTHIVTELESPVQSQ
ELQELIGQHPHALPVQKTWLEACFSRQRQVNTTKFLHCFK
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggccagcttccatcagaaaataaaaacaagcgtaccggaagaaaccaagagcagtctg
actgaaaaagatttgcagaagtggggtttgcaagggattcagttgcgagcctatcagctg
gatggagtgcagtggctcacccagtgcctggccaaccagcagggatgtatcctaggagat
gagatgggcctgggcaagacctgccagaccatctctctgctattgtacatgagaggggcc
ctgcggcaggatgggccgttcctggtcctcagcccactgtctgtcatggacaactggagg
agcgagatggaatgcttatccccctgtctcaaggtgctgtgttactatggagacaaagac
aagagagcagaactgcagagagacatgaacaacacacactaccatgttctgctaactaca
tatgagctctgtatcaaagatgcctcattcctgaaaaggaggaagtggaaagtcttggta
gttgatgaggctcacagactgaagaaccagaactccctgttgcacaaaatcctgatggag
ttctctctggatttcagagtgctgctgacaggaactcctatccagaacaacctgacggag
ctctacagcctcctatcgttcatccagcccagtctcttccccacagaccagaccgaggac
ttcactagcacttacaaccaggtccagacacaaccgactctggccagtgatctccagaga
gtgctgcagcccttcctgctgaggagggtgaaggctgaggtagcagctgacctccccatg
aagacagagatacttatgtaccacggcctgtctgccctgcagaagagatattataaggct
atactcatgaaggacctgtatgcctttgggaatgagcagggaaacaagaccagactgctt
aatatactgatgcagctccggaagtgtgtggaccacccctacctgtttgatggtgtggaa
ccagagccgtttgagatgggggagcatctgatccaggctagtggaaaactctgtctgctg
gacagcatgctggcatacctgcaccaagggggacatcacatcttgctgttctcccagatg
accaggatgctggacattctccaggactacatggaatacagaggttacagatatgagcgt
ctggatggatcagtcaggggggaagagcgtaacctggccatcaagaacttcagcagcaaa
gacgtctttgtctttctactcagcactaaagcaggaggcgttgggatgaacctaacagca
gctgatactgtgatcttcattgactctgacttcaacccccagaatgacctgcaggctgcc
gctcgctgccaccggattggtcagaccagggctgtgaaggtgatccggctcctggggagg
gatacggtagaggagattgtgtactcccgggcaagttctaagctcagccttaccaacaca
gtgatagaagaggggcgtttttctctgcttaaccacacccactctgctgctgccggtctg
cagctcagcgagatcctgaagtttggagtggacaagctgttgtcgtcagaagagagctcc
atccaggctgtgaacatgggtctgatcctgggtcagtctagagacggggagtggctgact
gatgaagcccccacccagaccaaggacctgcccactgaggaggaagaggagggagaatct
gagggacagaaccacatgtactactttgaagggagggattactcccgggaggtgagctct
gaggaccagaggaccttcagtcgtctcctggaggaagaggcaggaggaggaggaggagag
agacgagcgacacgacacaacgatgaagtgtgtctgtccgggcccatgttggcccccatg
aggaagaggaaggccttgactgagactgacctgaaagagagggaggaggctgcagctaag
agggccagagtacaggaggacaagaggaggagactacaggagaacaaacacaggaagaag
atggtatggtgggagtccagtgggtacaggtccctgtgtttaccctctgtggagagcgag
gaggaggaggaggctgatgacctcagtgtgacctctacagattcagaacactctgctatt
agttacgtgttgggcgatgtcacacacccctacgccaaccaggaagatgccatcatagtg
cactgtgttgatgactctggccggtggggtagaggtggtctcttcacagcattggagaac
aggtcagatgcaccgtgtaaacaatatgagctggctggaaagatgaaagacttggagctg
ggatcagtgttgctgtttcctgttgatgataaacagtccagactggatggccaagaccag
gtggccctgatagtggcccagcagagagccagagacaacagcctgtcagggatccatctc
tctgctctggaagaaggactccagaaaatctacagggtcgccaagactaacaaggctagc
gtccacctcccccgtatcggccactccaccagagggtttaactggtatggaacagagaga
ctcatcagaaaacatctggcctccagaggggtacacacctccatatactactacagcagg
tctgtctctacctctgctttaggtacgtccacaacaccctccacagcatcagcctcaacc
tccaaggcctcagcctctagctccaagacctcagcagcatccccctccccatcctccgtc
tccccctccccaaccaccgtctcagtctccccctctcctccacactcccccccagtgcca
cagtatcctggccctgactcagacagggagagtgaggaaggagagacagccaatcagagc
tcagacagagggattgaggaaagagagacagccaatcagagcagcaggacccccagcccc
tctggacctgctctgcctgacttcatgagaggagttcatgtgttcttctacaacctgaca
gcctcagacaggaagagactggcccgctacctcatcacatatgaaggagatgaggaggag
atcatgagttcagaggtcacacacattgtaacagagctggagagtcctgtccaatcacag
gagctccaggagctgattggtcagcaccctcatgcacttcctgttcagaagacctggctg
gaggcctgcttctctagacagagacaagtcaacaccaccaagttcctgcactgctttaaa
tga
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integrated database retrieval system
