KEGG   Oncorhynchus mykiss (rainbow trout): 110525078
Entry
110525078         CDS       T07259                                 
Name
(RefSeq) small nuclear ribonucleoprotein F
  KO
K11098  small nuclear ribonucleoprotein F
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110525078
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110525078
   03041 Spliceosome [BR:omy03041]
    110525078
   03032 DNA replication proteins [BR:omy03032]
    110525078
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     110525078
Spliceosome [BR:omy03041]
 Complex A
  U1 snRNP components
   Sm proteins
    110525078
  U2 snRNP components
    110525078
 Complex B
  U1 snRNP components
    110525078
  U4/U6.U5 tri-snRNP components
    110525078
 Complex C
  U2 snRNP components
    110525078
DNA replication proteins [BR:omy03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     110525078
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 110525078
NCBI-ProteinID: XP_021460703
LinkDB
Position
1:complement(53337030..53338484)
AA seq 138 aa
MKKKNVHSSPVGGSSAPFGCQPPFFLNIRVHHYFLQPTTACSFRWSSYKIKMSLPLNPKP
FLNGLTGKPVMVKLKWGMEYKGYLVSVDSYMNMQLANTEEYVDGALAGHLGEVLVRCNNV
LFIRGVEEEEEDGEMKDA
NT seq 417 nt   +upstreamnt  +downstreamnt
atgaagaagaagaatgtacactccagtccagttggtggcagtagtgcaccttttggttgc
caaccgccattttttttaaacataagagttcaccattacttcctgcaaccaacaacagcg
tgtagttttcgttggagctcatacaaaatcaaaatgagtttaccgctgaatcccaaaccg
tttctgaatggtcttactggtaagcccgtgatggtgaagctgaagtggggtatggaatac
aagggatacctggtgtccgtggacagctacatgaacatgcagttggccaacactgaagag
tatgtagatggagcgttggctggacacctaggagaggtgcttgtcagatgcaacaatgtc
ttgttcataagaggagtagaagaggaagaagaagatggggaaatgaaagatgcttga

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