Oncorhynchus mykiss (rainbow trout): 110525107
Help
Entry
110525107 CDS
T07259
Name
(RefSeq) myocyte-specific enhancer factor 2C isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110525107
04371 Apelin signaling pathway
110525107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110525107
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
110525107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
110525107
NCBI-ProteinID:
XP_036835350
LinkDB
All DBs
Position
6:complement(16174779..16286350)
Genome browser
AA seq
472 aa
AA seq
DB search
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESEEKYRKI
NEDIDLMISRQRLCQGVPSSNYEMPVSIPVNNQNSLIYSHPGGSLGNHNLLPLAHHMQRN
SMSPGVTHRPPSAGGLMGADLTTGAGTSAGNGYGNHHRNSPGLLVSSGSMNKSMQAKSPP
TMNLGMNSNRKPDLRVLVPPGVKNNMPSINQRINNSQSAQSLATPVVSVATPTLPGQGMG
GYPSAMSTSYGTEYSLSSADLSSLSGFNSGSSLHLGSMSGWQQQHLQNMQQHSALSQLGN
CNSNHLCHNSNLSLPSAQSLHIKSEPVSPPRDRTSSTPGGYGVPQQQNPSSRQDSGRSPV
DSLSSCSSSHEGSDRDDHRNEFHSPLGMSRPALDGCESPSVKRVRLSEGWAT
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagattcagatcacacggattatggatgaacgcaacagacaggtgacg
tttacgaagaggaagtttggcctgatgaagaaggcatatgagttgagtgtgctgtgtgac
tgtgagatcgctctcatcatcttcaacagcaccaataagctgttccagtacgccagcacc
gatatggacaaggtgctgctcaagtacaccgagtacaacgagccccacgagagcaggacc
aactctgacattgtggaaacattgagaaagaagggcctaaatggctgtgacagccctgac
cccgacgcagacgactccgtcggccacagccctgagtctgaggaaaagtacaggaaaata
aatgaagacattgatctgatgatcagcagacagagactgtgtcagggtgttccctcctcc
aactacgagatgccagtgtccatccctgttaacaaccagaacagtctcatctacagccac
ccaggaggttccctaggcaaccacaacctgctgcccctggcacaccacatgcagaggaac
agcatgtcccccggtgtcacacatagacctcccagtgcaggtggcctcatgggtgctgac
ctcaccactggtgcgggcaccagtgctggcaatggctacgggaaccaccaccgtaactcg
cctggtctactggtctcttcgggcagcatgaacaagagcatgcaggccaagtctcccccg
accatgaacctgggaatgaacagcaaccgcaagcctgacctgcgggtgcttgtcccccct
ggagtcaagaacaacatgccctccatcaaccagagaataaacaactcccagtctgcacag
tcattggccacccctgtggtttcagtagcaacgcccaccctacctgggcaaggaatgggc
ggttacccatcagctatgtccacttcatatggtactgaatactcgctgagcagtgcagac
ctgtcctccctgtccggctttaacagtggtagctccctccacctgggctccatgagtgga
tggcaacagcaacacctccagaacatgcagcagcactctgccctcagtcagctaggaaat
tgcaatagcaatcacttatgtcacaattcaaatctctccctgccttctgctcaaagcctg
cacatcaagtccgaacctgtttctcctcctagagatcgcaccagcagcacaccggggggc
tacggcgtcccgcagcaacagaacccctcgtctcgccaggactcaggccgctcccctgtc
gacagcctgagtagctgcagcagctcccacgagggcagcgaccgcgacgatcacaggaac
gagttccactctccactgggaatgtcccggcccgccctggacgggtgcgagagcccctcg
gtcaaacgcgtgcgcctgtccgagggatgggccacatga
DBGET
integrated database retrieval system
