Oncorhynchus mykiss (rainbow trout): 110525234
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Entry
110525234 CDS
T07259
Symbol
si:ch73-72b7.1
Name
(RefSeq) netrin receptor UNC5C isoform X1
KO
K07521
netrin receptor unc-5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110525234 (si:ch73-72b7.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110525234 (si:ch73-72b7.1)
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
DCC/UNC5 family
110525234 (si:ch73-72b7.1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
UPA
Unc5_NetrinR_N
ZU5
Death
I-set
Ig_3
TSP_1
TSP1_spondin
Ig_2
ig
VEGFR1-3_N_Ig-like
TSP1_CFP_C
DUF6724
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
110525234
NCBI-ProteinID:
XP_036835263
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Position
6:complement(9644491..9957507)
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AA seq
948 aa
AA seq
DB search
MGKSGQSAKTGIGLARHFLRMCTIPGLVLLVLVNIGVAQVRDEDDFLGLGELPETFPSDP
PEPLPHFLMEPEEAYIVKNKPVNLYCKATPATQIYFKCNSEWVHQKDHTVEERVDENSGL
VVREASIEIFRQQVDELFGPEDFWCQCVAWSSAGTTKSRKAHVRIAYLRKTFDQEPLGKE
VSLEQEVLLQCRPPEGIPAAEVEWLKNEEIIDPADDRNFYITIDHNLIIKQARLSDTANY
TCVAKNIVAKRRSTTATVIVYVNGGWSTWTEWSVCNSRCGRGYQKRTRSCTNPAPLNGGA
PCDGQATQKLACTSLCTVDGLWTEWSKWSTCGTECTHWRRRECNAPAPKNGGKDCEGMVL
QSQNCTDGLCMQSSLYQLSTEPNADSDLGFSSAPSTENMALYVGIVIAVIMCLVISVIVA
LFVYRKTHRDFDSDIIDSSALNGGFQSVNIKTARSADLLTAPPDLTNAAAMYRGPVYALH
DVSDKIPMTNSPLLDPLPNLKIKVYNSSGLVTPSEDLSDFSSKLSPKVTQSLLDSENMNL
RNQSLARTRDPSCTAAGSFNSQGGHLIVPNSGVSLLVPAGAVPQGRVYEMYVTVHRKDSM
RPPVEDVQTVLSPVVSCGPPGALLTRPVILTIHHCAEADGDDWQIQLKNQLNQGQWEDVV
VVGEENFTTPCYIQMDEEACHLLTETLGTYCLVGQSVSKAAAKRLKLAIFGPVSSTTLEY
HIRVYCLDDTQDALKEVLQMETQMGGKLLDEPKTLNFKDSTHNLRLSVHDVPHGQWKSKL
LAKYQEIPFYQVWSGCQRTLHCTFTLERFSSTTTELSCKLCVRQVEGEGQIFQLSSTLSE
DTQNIDTSLMDPASNITTLVGLNAFRIPLSIRQKLCGSLDAPQTRGSNDWRMLAHKLNLD
RYLNYFATKSSPTGVILDLWEAQHFPDGNLNRLAAVLEEMGRHDSLVP
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaagtggacagtctgcgaaaactggaataggacttgcgaggcactttctgcga
atgtgtaccatacctggactcgttcttctggtcctcgtaaacattggagtcgcacaagtg
agagatgaagatgacttcctggggttgggagagctgcctgagacctttccctcggacccc
ccggagcctctcccccacttcctgatggagcccgaggaggcgtacatcgtcaagaacaaa
ccagtcaatctctattgcaaggccacgcccgccactcagatttacttcaagtgcaacagt
gaatgggttcaccagaaggaccatacggtggaggagagagtggacgagaactcaggactg
gtggtgcgtgaggccagcatcgagatctttcggcagcaggtagacgaactatttgggcca
gaggacttctggtgtcagtgtgtagcctggagctctgcaggaaccaccaagagtcgtaaa
gcccacgtacgcatcgcatatctcaggaaaacatttgaccaggagccactggggaaggag
gtgtcactggaacaggaagtgcttctccagtgccgcccacctgagggcatacctgctgca
gaggttgagtggttgaagaacgaggagatcattgacccggctgatgaccgtaatttctac
atcaccattgaccacaacctgattataaagcaggccagactgtcggacacggccaactat
acgtgcgtggccaagaacattgttgccaagaggagaagtaccactgctactgttattgtc
tatgtgaacggtggctggtcaacatggacagagtggtcagtgtgtaacagtcgctgtggc
cgcggttaccaaaagcgtacccgcagctgtaccaatcccgccccgctcaacggaggagcc
ccctgtgatggacaggcaacccagaagctggcctgcacctccctctgcactgttgacggg
ttgtggacagagtggagtaagtggtctacttgtggtacagagtgcactcactggcgcagg
agagaatgcaatgcccctgcacccaaaaatggaggcaaggactgcgagggtatggtccta
cagtcccagaactgtactgacggactctgtatgcagagttcattatatcagctgtccact
gagcctaatgccgacagtgatttgggattttcatcggcccccagcacagaaaacatggcg
ctctacgtaggcatcgtcatcgctgtcataatgtgtctggtcatctccgtcatcgtggcg
ctcttcgtctaccggaaaacccaccgggactttgactctgacatcatcgactcatcagcc
ctcaacggaggcttccagtcggtcaatataaagacggcgcgctcagctgacttgctgacc
gctcccccggacctgaccaacgctgcggccatgtaccgcggccccgtctacgccctgcac
gacgtgtccgacaagatccccatgaccaactcgccccttctggaccccctgcccaacctg
aagatcaaggtgtacaactcctctggcctggtcactccttcggaagacctgtctgacttc
tcctccaagctgtcccctaaggtcacccagtccctgctggacagtgagaacatgaacctg
cgtaaccagagcctggctcggacccgagacccctcctgcaccgccgcaggatccttcaac
tcccagggaggacacctcattgtgcccaactcaggtgtgagcttgctggtgccagcgggt
gctgttcctcagggtcgtgtgtatgagatgtacgtgacggtgcacaggaaggacagcatg
aggccaccggtagaggatgttcagacagtgttgagccccgtggtgagctgtggtccccca
ggggccctcctgacccgcccagtcatcctcaccattcatcactgtgccgaggccgacgga
gacgattggcagatccagttgaagaaccagctgaatcagggccaatgggaggacgtggta
gtggtcggcgaggagaacttcaccacaccctgctacatccagatggatgaggaggcatgt
catctactgacagagaccctagggacctactgcctggtgggccagtccgtcagcaaggct
gccgccaagcgcctcaaactggccatcttcggccctgtgtcaagcaccacactggagtac
cacattagagtctactgtctggacgacacccaggacgcactcaaggaggtacttcagatg
gagacccagatgggagggaagctgctggatgaaccaaagaccctgaacttcaaggacagc
acccacaacctgcgcctctctgtccacgacgtcccccacggacagtggaagagcaagctg
ctcgccaagtaccaggagatccccttctaccaggtgtggagtggctgccagcgaacactt
cactgcaccttcaccctggagcggttcagctccaccaccacagagctcagctgtaagctg
tgtgtacgccaagtagaaggggaggggcagatctttcagctcagcagcactttgtctgag
gatacccagaacattgacacgtctctcatggacccggctagcaacatcaccaccctggtg
gggctcaacgccttccgtatccctctctccatcagacagaagctctgtggcagccttgac
gcgccccagaccagaggatccaatgactggaggatgctggcccacaaactcaacctggac
aggtatctgaactattttgccaccaagtccagtcccacaggggtgatcttggacctgtgg
gaggcccaacacttcccagacgggaacctcaacagactggctgccgtgctggaggagatg
ggtcgccacgacagcctggtcccatga
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