KEGG   Oncorhynchus mykiss (rainbow trout): 110525234
Entry
110525234         CDS       T07259                                 
Symbol
si:ch73-72b7.1
Name
(RefSeq) netrin receptor UNC5C isoform X1
  KO
K07521  netrin receptor unc-5
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    110525234 (si:ch73-72b7.1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:omy04515]
    110525234 (si:ch73-72b7.1)
Cell adhesion molecules [BR:omy04515]
 Immunoglobulin superfamily
  DCC/UNC5 family
   110525234 (si:ch73-72b7.1)
SSDB
Motif
Pfam: UPA Unc5_NetrinR_N ZU5 Death I-set Ig_3 TSP_1 TSP1_spondin Ig_2 ig VEGFR1-3_N_Ig-like TSP1_CFP_C DUF6724 CR_prot_dom_plant
Other DBs
NCBI-GeneID: 110525234
NCBI-ProteinID: XP_036835263
LinkDB
Position
6:complement(9644491..9957507)
AA seq 948 aa
MGKSGQSAKTGIGLARHFLRMCTIPGLVLLVLVNIGVAQVRDEDDFLGLGELPETFPSDP
PEPLPHFLMEPEEAYIVKNKPVNLYCKATPATQIYFKCNSEWVHQKDHTVEERVDENSGL
VVREASIEIFRQQVDELFGPEDFWCQCVAWSSAGTTKSRKAHVRIAYLRKTFDQEPLGKE
VSLEQEVLLQCRPPEGIPAAEVEWLKNEEIIDPADDRNFYITIDHNLIIKQARLSDTANY
TCVAKNIVAKRRSTTATVIVYVNGGWSTWTEWSVCNSRCGRGYQKRTRSCTNPAPLNGGA
PCDGQATQKLACTSLCTVDGLWTEWSKWSTCGTECTHWRRRECNAPAPKNGGKDCEGMVL
QSQNCTDGLCMQSSLYQLSTEPNADSDLGFSSAPSTENMALYVGIVIAVIMCLVISVIVA
LFVYRKTHRDFDSDIIDSSALNGGFQSVNIKTARSADLLTAPPDLTNAAAMYRGPVYALH
DVSDKIPMTNSPLLDPLPNLKIKVYNSSGLVTPSEDLSDFSSKLSPKVTQSLLDSENMNL
RNQSLARTRDPSCTAAGSFNSQGGHLIVPNSGVSLLVPAGAVPQGRVYEMYVTVHRKDSM
RPPVEDVQTVLSPVVSCGPPGALLTRPVILTIHHCAEADGDDWQIQLKNQLNQGQWEDVV
VVGEENFTTPCYIQMDEEACHLLTETLGTYCLVGQSVSKAAAKRLKLAIFGPVSSTTLEY
HIRVYCLDDTQDALKEVLQMETQMGGKLLDEPKTLNFKDSTHNLRLSVHDVPHGQWKSKL
LAKYQEIPFYQVWSGCQRTLHCTFTLERFSSTTTELSCKLCVRQVEGEGQIFQLSSTLSE
DTQNIDTSLMDPASNITTLVGLNAFRIPLSIRQKLCGSLDAPQTRGSNDWRMLAHKLNLD
RYLNYFATKSSPTGVILDLWEAQHFPDGNLNRLAAVLEEMGRHDSLVP
NT seq 2847 nt   +upstreamnt  +downstreamnt
atggggaaaagtggacagtctgcgaaaactggaataggacttgcgaggcactttctgcga
atgtgtaccatacctggactcgttcttctggtcctcgtaaacattggagtcgcacaagtg
agagatgaagatgacttcctggggttgggagagctgcctgagacctttccctcggacccc
ccggagcctctcccccacttcctgatggagcccgaggaggcgtacatcgtcaagaacaaa
ccagtcaatctctattgcaaggccacgcccgccactcagatttacttcaagtgcaacagt
gaatgggttcaccagaaggaccatacggtggaggagagagtggacgagaactcaggactg
gtggtgcgtgaggccagcatcgagatctttcggcagcaggtagacgaactatttgggcca
gaggacttctggtgtcagtgtgtagcctggagctctgcaggaaccaccaagagtcgtaaa
gcccacgtacgcatcgcatatctcaggaaaacatttgaccaggagccactggggaaggag
gtgtcactggaacaggaagtgcttctccagtgccgcccacctgagggcatacctgctgca
gaggttgagtggttgaagaacgaggagatcattgacccggctgatgaccgtaatttctac
atcaccattgaccacaacctgattataaagcaggccagactgtcggacacggccaactat
acgtgcgtggccaagaacattgttgccaagaggagaagtaccactgctactgttattgtc
tatgtgaacggtggctggtcaacatggacagagtggtcagtgtgtaacagtcgctgtggc
cgcggttaccaaaagcgtacccgcagctgtaccaatcccgccccgctcaacggaggagcc
ccctgtgatggacaggcaacccagaagctggcctgcacctccctctgcactgttgacggg
ttgtggacagagtggagtaagtggtctacttgtggtacagagtgcactcactggcgcagg
agagaatgcaatgcccctgcacccaaaaatggaggcaaggactgcgagggtatggtccta
cagtcccagaactgtactgacggactctgtatgcagagttcattatatcagctgtccact
gagcctaatgccgacagtgatttgggattttcatcggcccccagcacagaaaacatggcg
ctctacgtaggcatcgtcatcgctgtcataatgtgtctggtcatctccgtcatcgtggcg
ctcttcgtctaccggaaaacccaccgggactttgactctgacatcatcgactcatcagcc
ctcaacggaggcttccagtcggtcaatataaagacggcgcgctcagctgacttgctgacc
gctcccccggacctgaccaacgctgcggccatgtaccgcggccccgtctacgccctgcac
gacgtgtccgacaagatccccatgaccaactcgccccttctggaccccctgcccaacctg
aagatcaaggtgtacaactcctctggcctggtcactccttcggaagacctgtctgacttc
tcctccaagctgtcccctaaggtcacccagtccctgctggacagtgagaacatgaacctg
cgtaaccagagcctggctcggacccgagacccctcctgcaccgccgcaggatccttcaac
tcccagggaggacacctcattgtgcccaactcaggtgtgagcttgctggtgccagcgggt
gctgttcctcagggtcgtgtgtatgagatgtacgtgacggtgcacaggaaggacagcatg
aggccaccggtagaggatgttcagacagtgttgagccccgtggtgagctgtggtccccca
ggggccctcctgacccgcccagtcatcctcaccattcatcactgtgccgaggccgacgga
gacgattggcagatccagttgaagaaccagctgaatcagggccaatgggaggacgtggta
gtggtcggcgaggagaacttcaccacaccctgctacatccagatggatgaggaggcatgt
catctactgacagagaccctagggacctactgcctggtgggccagtccgtcagcaaggct
gccgccaagcgcctcaaactggccatcttcggccctgtgtcaagcaccacactggagtac
cacattagagtctactgtctggacgacacccaggacgcactcaaggaggtacttcagatg
gagacccagatgggagggaagctgctggatgaaccaaagaccctgaacttcaaggacagc
acccacaacctgcgcctctctgtccacgacgtcccccacggacagtggaagagcaagctg
ctcgccaagtaccaggagatccccttctaccaggtgtggagtggctgccagcgaacactt
cactgcaccttcaccctggagcggttcagctccaccaccacagagctcagctgtaagctg
tgtgtacgccaagtagaaggggaggggcagatctttcagctcagcagcactttgtctgag
gatacccagaacattgacacgtctctcatggacccggctagcaacatcaccaccctggtg
gggctcaacgccttccgtatccctctctccatcagacagaagctctgtggcagccttgac
gcgccccagaccagaggatccaatgactggaggatgctggcccacaaactcaacctggac
aggtatctgaactattttgccaccaagtccagtcccacaggggtgatcttggacctgtgg
gaggcccaacacttcccagacgggaacctcaacagactggctgccgtgctggaggagatg
ggtcgccacgacagcctggtcccatga

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