Oncorhynchus mykiss (rainbow trout): 110525262 Help Entry 110525262         CDS       T07259                                  Name (RefSeq) dmX-like protein 1 isoform X1   KO K24155   rabconnectin-3a Organism omy  Oncorhynchus mykiss (rainbow trout) Pathway omy04142   Lysosome Brite KEGG Orthology (KO) [BR:omy00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     110525262  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:omy04131]     110525262 Membrane trafficking [BR:omy04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     110525262  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     110525262    RAVE complex     110525262 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_IFT140_1st WDR55 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd EIF3I WD40_Gbeta Beta-prop_HPS5 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_SPT8 Motif Other DBs NCBI-GeneID:  110525262 NCBI-ProteinID:  XP_036835296 Ensembl:  ENSOMYG00000029889 LinkDB All DBs Position 6:11746013..11809089 Genome browser AA seq 3028 aa AA seqDB search MNLHQVLTGAVNPGDNCFSVGSINNQPFTAYASGCDVVILGSDFERLQIIPGAKHGNIQV GCVDSSLQGGQVAASYGSIVCVFEPVQLMNQKDRTSAELSYQWQKSGQFVLQSIVRNLAW DPTGTRLLTGSASLQLWSNISDGFDEAGEQTDMTIGDPQCPWRCIWHCKTASPIQLMKFS PDGEFFATAGQDDCLVKVWYGTSKWQSGVTKLFTPPEHNAQGELDFSFVYLAHPRTVTGF SWRKTSKYMPRGSVCNVLLTCCKDSVCRLWAETLLPSDSLLSGHTLSHVNNNGQSSDSLK SSSSKKTPSRIKTQDRNSLELNLQESWRAPLRGVAQPSLTGRLPTQQNSHHNHKTNSVPH ANALCHFHIAASINPATDIPLLPSITSLCGGDDEEPGGPFTVHWLNNKELLLTLAMEVFL QQLRGSVEQNHSENSQEELDYEEVEEASRRAAEGGPDVASTQLPAAAVEHQVEVLLEDWN RGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDANSLSRSVV MYACNKNVDLAIQHGRQRPAGLPHSSSVLIPYGQSKATSYSSSLRLSIFTPNVLMISTHS DGSLNQWAVSFAEESAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLTTSHHNALRTP DVDSVPAPSTTLSQPFGGGPSRVSLGAVSQDPNAIYSELILWRVDPVGPLSFSGGVSELA RINSLHSSAFSNVAWLPTLIPSNCLGVYCNSPSACFVASDGHSLRLYQAVIEAKKLLSEL SNPDISKYVGKVFNIISQQSTAKPGCIIELDAITDFQGKETQLLHVFEEDLILGSERREA TQEAHAIETASSQPGFSARFFLVVVEFTQTGRSFLHMWHLQLAAGQITMDETGAPPEKEN MTSSPMNSSFSFETFSSPSAQKNKPCTSNLQSASRLTLATHRLYSQELALPDGVEVISVT PSAGHLSASSLQPAGGAPYLLATSCSDGRVRFWRCRVAAVEPDTNELTYTWEEWPLLVEE GLGNSSAVTVSGRPVTVSCCHTSRIAVAYRHNPSPHLSPNHLSPNPQQGVREPLVHVGLF QCESTGGSHWVLEQTLVLDASTPTGNNNNNMESGVKDLNVENNNLDIYLPNDDCLGTSGK SLVHLDWVSREDGSHILTVGIGSKLYMYGLLSGKPPELGLSEGPREQSSSRLVLLRSVDL VSSVEGSLPIPVSLSWVRDGILVVGMDCEMHVYSQWQPPALAKSTASNTTTTDMGSVSSL LAAMKQSHEEGLNPVPPKKSLTRSMTSLAQKLSGKRTVYDLPAEMEDYGLFEAAHHLFPT LPQYHPVQLLELMDLGKVRRAKAILSHLVKCIAGEIVALKDNGTNQDKRLRSRTISAGGS TSRDPKLFSKGESSDYTEIDSIPPLPLYALLAADEDCSPKPKDKVASLSGDSGHGSSQTD AYDELFQSSGVGVDDLEHMDSDQEDGGAKVIDLSQYSPTFFGPEHAQVLSSHLLHSSLPG LTRMEQMSLMALADTIATTSTDIRESQSRGKGGETLDECGLKFLLAVRLHTFLLTTLPPA HRAQLLRQGLSTCHYAWAFHSEAEDELLHMLPALQKGDPTWPELRAMGMGWWLRSTNKLR RCIEKVAKASFQRQNDPLDAAIFYLAMKKKAVVWGLYRSQKNAKMTTFFSNNFGEERWRR AALKNAFSLLGKQRFQHSAAFFLLAGSLKDAVEVCLEKMQDLQLALVISRLYESEFETSS TYKRILQRHVLGQDRQLPAHQDPFLRSTAYWVLEDYSRALDTLLEQPAAPNLASSTQAGH TTQPGSTSSTSLCSPEVFNFYTYLRTHPLLLRRHFGSSEKTRVGLTAEGRMANSISLVER RLFFTAAYAHLQAGCPMLALEVLSKMPKVVKRSKLPQDDTTNPDLSETKKEQASVLDWSQ PALNGFESVSDSLSNSQSDSVLSFDWGQPSLSVQDEALELKWDSDKEEEEEEDDDEPQGL VMKSADNTSSVFQDAISPLTETLLDEGDFLMPSEDILAAQLKFSACLKILTTELRTLSTG YELDGGKLRYQLCQWLEREVVALQRCCSYKPCLPELALGMAGPGGEEEAQAHPGEAQRTR RHWLQSNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESQQDDGVQSAVAPYLHHAS IPLLLACTASAKTVVANPIVHLTNLTHDILHTINALDSPPHPDVVNNEIYVMHTLAASLS ACIYQCLCDGHNHSHVNQFTGIVYQSILSFQHHPVRTVSMEETVLPNTHPAQWPGISTLI RLLNSAGEESQPGLAVLLCEILTAVFLSLFVHGLATHSSNELFRIVAHPLNSKLWVAVFG GGARTPITEKPSKAKSPPAASEEFDRKPRRFKLLSSSPRSASREGPETPSPTSPVVEQET SIFKEHFVPPELSIWDYFIAKPFLPPSESRVEYDSEESQGSQDEDDDDDEDEFGDFDPNS PSREHSNPNSYSWCLMRLAMVQLVLGSLKSFYPMAGHDLLDLPVGSPLCHAVLKTLQRWE QVLLKRLEIFGGPPSKYISTHPLDETAASGPAILRHKALFEPSNTPFRSSHHSALPVKRL WQYLVKQEEVQETFIRNIFTKKRNQNESVEDLNENDKCSGMEEPSCNQSKADLGYPGGKA RIIHKDSDIITAFAINKANRNCLVMASTHDIQELDVSSILATQILTWIDDDTEAEAKGDD FLVIQARDDFNTLHGTTPYTHSSLGTPINMPWLGGLQTGRGAAVLIKRNINNVRRMTSHP TLPYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIRFNHQGNKFGIVDADGALRLW QTNTTGNTPKPYLTLQCHNKTAHDFVFVGSSSLIATAGLSTDNRNVCLWDTLVNPMNSLV HAFSCHESGATVLSLAPRQQLLITGGRKGWISVLELPHRHQRQSFQAHDSPVKALAVDPT EGSFISGSAEGNIKVWSLSMQCLLHQFPNEHARQSLFRNLGTGVMQIEVGPANHIFSCGA DGTMKMRILPDRFSVNNGNLKNDVKFII NT seq 9087 nt NT seq  +upstreamnt  +downstreamnt atgaatcttcaccaagtccttactggggccgtcaacccaggggacaattgtttttctgta ggtagcataaacaaccaaccattcacggcatatgcctctggctgtgacgttgtgattttg ggcagtgactttgaaaggctgcagatcatcccaggagcgaagcatgggaacatccaggtg ggctgtgtggacagctcactacagggaggccaggttgcagcttcctatggaagtattgtc tgtgtctttgagccggttcagctcatgaaccagaaggacaggacatcagcagaactgagc taccagtggcagaagagtggacagtttgttttgcagtccatagtgcgtaacctggcctgg gaccccacaggcactcgtctcttaactgggtccgctagcctgcagctgtggtccaatatc agcgatggttttgatgaggcaggggaacagacagacatgacaattggtgaccctcagtgt ccctggaggtgtatctggcactgcaaaaccgcctccccaattcagctcatgaagttctct ccagatggagaattctttgctactgccggacaggacgactgtctggtcaaagtgtggtac ggcacgagcaaatggcagtctggcgtgaccaagctgttcaccccaccggagcacaacgct cagggcgagctcgacttctcttttgtctacctggcacacccacgcactgtaacaggcttc tcctggaggaagaccagcaagtacatgccacggggttcagtgtgcaatgttctactgacg tgctgtaaggacagtgtgtgtcgcctgtgggccgagaccctgcttcccagtgacagcttg ctgtccggacacacgctcagtcacgttaataataacggacagagcagcgactcgctgaaa tcgtcaagcagcaagaagactccctctcgtatcaaaacacaggacaggaattccctggag ttgaatctgcaggagtcgtggagagcccccttgagaggtgtggcccagccctccctaacc ggccgcctcccgacccagcagaacagtcaccacaaccacaagaccaacagcgtgccccat gccaacgctctctgccactttcacatcgctgccagcatcaaccctgccacagatatcccc ctgctgccctctatcacgtcgctgtgtgggggagatgacgaggagcctggcgggcccttc accgtgcactggctcaacaacaaggagctgcttctcaccctggccatggaggtgttcctg cagcagctcagaggcagtgtggagcagaaccactcggaaaactcccaggaggagcttgac tatgaggaggtagaggaggcttcaaggcgagcggcagagggaggacccgatgtggcgtcc acccagctgcctgctgcagcggtggagcaccaggtagaggtgctactggaggactggaac agaggggcagacatgctgttcagtatccaccccatggatggctctctgctggtgtggcat gtggactggctggatgaataccagcccggcatgttccggcaggtccaggtgtcctttgtg tcccggattcctgtggccttccccacgggtgacgccaactccctgagccgcagcgtggtc atgtacgcctgtaacaagaacgtggacctagccatccaacatggccgccagcggcctgcc ggcctgccacattcctcgtcggtgctgattccctacggccagagcaaggcgacctcctac tccagcagcctccgcctcagcatcttcacccccaacgtgctcatgatctccacgcactcc gatggctccctcaaccagtgggcagtcagcttcgcagaggagtcggccttctccactgtg ctcagcgtgtcccacaagtcacgctactgcggccaccgcttccacctcaacgacctggcc tgccactccctgctgcccctgttgctcaccacctcacaccacaatgctctgcgcaccccc gacgtggacagtgtccccgccccctcgaccaccctttctcaaccctttgggggcgggccc agccgggtgtccctgggcgctgtgtcgcaggaccccaacgccatctacagcgagctcatt ctgtggagggtggatccagtgggacctctgtccttctctggaggggtgtctgagctggcc aggatcaactctctccactcctccgccttctccaatgtagcctggctgcccacacttatc cccagcaactgccttggtgtctactgcaactctcccagtgcctgcttcgtggccagtgac ggtcactcgctgaggctttatcaggctgttattgaagccaagaaactactcagtgagctc tccaacccagatatttcaaaatatgtcgggaaagtttttaacatcatcagccagcaatcg actgctaaaccaggttgtatcatcgagctagatgccattactgacttccagggaaaggag actcagctgctgcatgtgtttgaagaggatctgattctgggcagtgagcggagagaagcc actcaggaagctcacgctatagagactgcctccagccagcctggcttctccgcccgcttc ttcctggtggtggtagagttcacccagactggcaggtctttcctgcatatgtggcacctg caactggcagctggccaaatcactatggacgagaccggcgctccgcctgagaaggagaat atgacctcgtcgccaatgaacagctcctttagctttgagacgttcagctccccctcggcc cagaagaacaagccttgcacgtccaacctgcagagtgccagtcgcctcaccctggccact cacaggttgtacagccaggagctagctcttccagatggtgttgaggtgatcagcgtcacg ccctcagcaggtcatctgagcgcgtcctccctgcagccggcaggtggcgctccctatctc ctggccacttcctgttcagacgggagggtgaggttctggaggtgcagggtggctgcagtg gagccagacaccaatgaactgacgtacacctgggaggaatggcctctattggtggaggag gggctgggcaacagcagtgccgtgaccgtgtcaggcagaccagtcacggtcagctgttgt cacaccagccgcattgcagtggcctaccgacacaaccctagccctcacctgagccctaac cacctgagccctaaccctcagcagggtgtcagggaaccactggtccatgtagggttattc cagtgtgagtccacaggtggctcccactgggtgctagagcagaccctcgtcctggatgcc tccactcccactggtaacaacaacaataacatggagagtggcgtcaaggacctgaatgtg gagaataataacctggacatctatctgcccaatgacgactgcctggggacctctggtaag agtctggtccacctggactgggtctccagggaggacggctcccacattcttactgtgggg attggttccaaactctacatgtatggcctgctctctggcaaacctcctgaactgggcctg tctgagggccccagggagcagagctcttcccgcctggtcctcctgcgctccgtggacctg gtctcctccgtggaaggctccctgcccatccccgtctccctgtcctgggtgagagacggc atcctggtggtgggcatggactgtgagatgcacgtgtactcccagtggcagcccccggcc ctggccaagtccactgcctcgaacaccaccaccacagacatgggcagcgtgtcatctctc ctggctgcaatgaaacagagccatgaggagggcctgaaccccgttcctcccaagaagagc ttgaccaggtccatgaccagcctggcccagaagctgagtgggaagaggacagtgtacgac ctgcctgcggagatggaggactacgggctgtttgaggcggcacaccacctgttccccaca ctgccccagtaccacccggtacagctgctggagctcatggacctggggaaggtccggcgg gccaaggccatcctctcccacctcgtcaaatgcattgccggggagattgtggccctcaaa gacaacggcaccaaccaagacaagcgtctccgctcgcgcaccatcagcgccggcggcagc acttccagagaccccaagctcttcagcaagggcgagagctcggactacacagagattgac tccatccctcccctgcccctgtacgcgctgctggcggccgacgaggactgctcccccaag cccaaggacaaggtggccagcttgagtggagacagtggccacgggtccagtcagacggac gcctacgatgagctcttccagagcagcggggtgggtgtggacgacctggagcatatggac agcgaccaggaggacggcggtgctaaggtcatagacctgtctcaatatagccccacattc tttgggccagagcacgcccaggttctgtccagccacctgctccactccagcctgccgggc ctgacccgcatggagcagatgtccctcatggccctggctgacaccatcgccaccacaagc actgacatccgggagagccagagcaggggtaaaggtggagaaactttggatgagtgcggt ctgaagttcctgttggctgtgaggctccatacgttcctgctgaccaccctgcctcctgcc catcgcgctcagctgcttcgccaaggtctgtccacctgtcactacgcctgggccttccac tccgaggctgaggacgagctgctccacatgttacctgccttgcagaaaggagaccccacc tggcccgagctccgcgccatgggcatgggctggtggctcaggagcaccaataaactccga aggtgtatagaaaaagtcgcaaaagcatcttttcaaaggcagaacgatcctctggacgcc gccatcttctatctcgctatgaaaaagaaagcggtggtctggggactgtacaggtctcag aagaatgctaaaatgactacattcttcagcaacaacttcggtgaggaaaggtggaggagg gctgccttgaagaacgccttctctctgctggggaagcagcgcttccagcactctgcagcc ttctttcttttggcaggctccctcaaggacgctgtggaggtttgcctggagaagatgcag gacctgcagctggccctggtgatctcccggctctatgagtccgagtttgagacgtcctcc acctacaaacgcatcctgcagaggcacgtgctgggccaagaccgccagctccccgcccac caggaccctttcctgcgtagcacggcctactgggtactggaggactacagccgggccctg gatactctgttggagcagcctgctgccccaaacctagcgtcctccactcaggctggccac acaactcaaccaggtagtacctcgtccacgtccctctgtagcccggaggtcttcaacttc tacacctacctccgcacacatcccttactgctgcgccgccattttggctcgtctgagaag accagggtgggtctgacagcggagggtcgcatggctaactcaatcagcctggtggagagg aggctgttcttcaccgcagcctacgctcacctgcaggccggctgccccatgctggccctg gaggtcctctccaaaatgcccaaagtcgtcaaaagatccaagctcccccaggacgatacc accaaccccgacctgagcgagacgaaaaaggaacaggcgtcagttttggactggtctcag cccgcgttgaacggcttcgagtctgtgtcagacagcttgtccaatagccaatcggactct gtgctgagttttgactggggccagccctctttgtcggttcaggatgaagccctggagttg aaatgggacagcgacaaggaggaggaagaggaggaggacgacgacgaaccacagggcttg gtcatgaagagtgccgacaacaccagtagcgtctttcaagacgccatctctccattgacg gagacgctgctggacgagggtgacttcctcatgccctctgaggacatcctggccgctcaa ctcaaattcagcgcctgcctaaagatcctgaccacggagctgcggactctgtccacgggt tacgagctggatggggggaagctccgctaccagctgtgccagtggctggagagggaggtg gtggccctgcagaggtgctgcagctacaagccctgcctgccagagctggccctgggaatg gcagggccgggtggagaggaggaggcccaggcccaccctggtgaggctcagcgcacccgc agacactggctccagagcaaccagcctctcctgcgcatgttcctcagctactgcagcttg cacggctcccacggaggaggcctggcctcagtgcgcatggaactcatcctgctgcttcag gagtcccaacaggatgatggtgtccagtcagccgtcgccccctacctgcaccacgcctcc attcctcttctgctggcctgcactgccagtgccaagacagttgtggccaaccccatcgtc catctgactaacctcacccacgacatcctgcacaccatcaacgcactggactccccgcca cacccagacgtcgtcaacaacgagatctatgtgatgcacacactggcagcctcgctgtcc gcctgcatataccagtgtctctgcgacggccacaaccacagccatgtgaaccagttcact gggatagtgtaccagagtatcctctccttccagcaccacccggtacgcactgtgagcatg gaggagactgtactgcccaacacccacccagcacagtggccaggtatcagtaccctgatc cgcctgttgaactctgctggtgaggagagccagccaggcctggccgtgttattgtgtgag atcctgacggccgtcttcctcagcctgtttgtgcacggcctggccacccactccagcaac gagctgttccgcatcgtggcccacccgctcaacagcaagctgtgggtggctgttttcgga gggggggcacgtacccccatcacagagaagcccagtaaggccaagtcacctccagcagcc agtgaggagttcgataggaagcccaggcgcttcaagctgctgtcgtcgtcgccacgcagt gcctccagagaggggccagagacccccagcccaaccagccctgtggtggagcaagagacc tccatcttcaaagagcactttgtccccccggagctcagcatctgggactactttatcgca aagcctttcctccctccgtcagagagcagggtggagtacgactcggaggagagccagggc agtcaggacgaggatgatgatgatgatgaagacgagtttggagactttgaccccaactct cctagccgagaacattccaatcccaactcctacagttggtgtctgatgcgcctggccatg gtccagctggtcctaggcagcctgaagtcattctaccctatggcaggacacgacctacta gatctacctgtgggctctcctctgtgtcacgcggtgctgaagaccctccagcgttgggag caggtattgctgaagaggctggagatcttcggggggccgccctccaagtacatctccaca caccctctggacgagacggctgcctcaggccccgccatcctcagacacaaagccctgttt gagccctccaacacacctttcaggtccagtcaccactctgccctgcctgtgaagaggctg tggcagtacctggtcaaacaggaagaggtgcaggaaacgttcatccgcaatattttcacc aagaaacgaaaccaaaacgagtcggttgaggacctcaatgaaaatgacaaatgttcaggg atggaggagcctagctgtaaccagagcaaggcagatctgggctaccccggaggcaaggcc cggatcatccacaaggactcggacatcattaccgccttcgccatcaacaaggctaatcgg aactgcttagtcatggcctccactcatgacatccaggagctggacgtgtcctccatcttg gccactcagattctgacgtggatcgatgacgatacggaggccgaggccaaaggtgatgac ttcctggtgatccaggcccgggacgacttcaacaccctccacggcaccaccccctatacc cacagcagcctagggacgcccatcaacatgccctggctcgggggcctgcagacggggaga ggcgctgccgtgctcatcaaaaggaacatcaacaacgtgagaaggatgacctcccaccca accttgccttactacttaacaggagcgcaggacggaagtgtccggatgtttgagtggggc cactctcagcagatcatctgcttccgaagtccaggcaattccagagtcacacggatacga ttcaaccaccaaggaaacaagtttggtatcgttgacgctgacggagccctacgtctatgg cagaccaatacgactgggaacacccctaaaccctacctgacattgcagtgccataataag acggctcacgactttgtgttcgtgggctcatcctccctcatagccacagcagggctgtca acagacaacaggaatgtgtgtctttgggatacattggtgaatccaatgaacagtctagtg cacgcctttagttgtcatgagtcgggggccacggtgctgtcgctggcccccaggcagcag ctgctaatcacaggtggcaggaagggctggatcagcgtgctggagctcccccacaggcac cagcgccagagcttccaggcccacgactcccctgtcaaggccctggctgtggaccccacc gagggcagcttcatcagcggctctgccgaaggcaacatcaaggtgtggagcctgtccatg cagtgcttactgcatcagttccccaacgagcacgctcgccagtccctgttccggaatctg ggcacgggcgtgatgcagatcgaggtgggcccggccaaccacatattttcgtgtggcgcc gatggtaccatgaagatgaggattctccctgaccgcttcagcgtcaacaatggcaacctg aagaacgacgtcaagttcatcatttag

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