Oncorhynchus mykiss (rainbow trout): 110525275
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Entry
110525275 CDS
T07259
Name
(RefSeq) ubiquilin-1 isoform X1
KO
K04523
ubiquilin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110525275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110525275
03051 Proteasome [BR:
omy03051
]
110525275
Membrane trafficking [BR:
omy04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
110525275
Proteasome [BR:
omy03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
110525275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
STI1-HOP_DP
Ubiquitin_5
Rad60-SLD
UBA_7
YukD
Dsc3_N
UN_NPL4
XPC-binding
CUE
UBA_HOIP
Het-C
Motif
Other DBs
NCBI-GeneID:
110525275
NCBI-ProteinID:
XP_021460944
Ensembl:
ENSOMYG00000033654
LinkDB
All DBs
Position
6:complement(12250481..12257863)
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AA seq
565 aa
AA seq
DB search
MANTVDEDEQQPFPAECKIIRVTVKTPKEKEEIAIPENSSIKQFKEQIAQRFQAQTEQLV
LIFAGKILKDADLLSHQGIHNGLTVHLVIKTLSRPPELCASPSNTTASEQAQPEGPTSVP
GPPPVEPTSVPRPSPASSATPTFSLGLGSPGTAAAGPGLAELQRQLMSNPELLAQIMDSP
LVQGMLSNPDMMRQLIMANPQMQLLLQHNPNITHLFNNPDVMRQTLEIARNPTMMQEMLR
NQDRTLSNNALRRMSTDAQGPMLNAAAQEPIAGNPFASLTTSSSVEIQSPRVENGDPLAN
PWVPPASTDTATPTTTPTLSSNGPQTTLHNLGPAMGGRTSNSAAMANSPGMQSLLQQITE
NPTLMHNMLSAPYMRSLLNSLSQNPDLAAQMMLNNPLFSGNPQLQQQMRQQLPMFLQQMQ
NPEMLSAMSNPRAMQALLQIQQGLQTLATEAPGFIPGVGLGGAGSDLNPAPGLSSDPAPS
DLSSGSQVVPETGQRQQQQQFVRQMLDALASTNQQAQTEELLFQEQVEQLTTMGFLNPEA
NLQALIATGGDVNAAVERLLDSPPL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggctaatactgtggatgaggacgagcaacaaccattccctgctgaatgtaagatcatc
agagttactgtgaaaacaccaaaggaaaaagaggaaatcgccattccagagaacagctcc
atcaaacagtttaaggagcagatagcccagcggttccaggcacaaacagagcagctggta
ctcatcttcgctgggaagatcctcaaagatgcagatctgctgagtcatcaaggcatccac
aatggactgaccgtccacctggtcatcaagaccctgagcaggcctccggagttgtgtgcc
tctccttccaacaccactgcctcagaacaggcccaaccagaaggccctacctctgtccct
ggaccccctcctgtagaacctacctctgtccctcgaccctctcctgcttcttcagccacc
cctaccttcagccttggtctaggcagtccagggacagctgctgcggggcctggtctcgct
gagctgcagaggcagctgatgtccaaccctgagctgctggcccagattatggacagtccc
ttggtccagggcatgctgtccaacccagacatgatgagacagctcatcatggccaacccc
cagatgcagctgctactgcagcacaaccccaacatcacccacctgttcaacaaccctgac
gtcatgagacagaccctggagatagcacggaacccaaccatgatgcaggagatgttgcgc
aaccaggacaggacactaagcaacaatgccctccgcaggatgtccactgatgctcaggga
cccatgctgaatgctgctgctcaggaaccgattgcaggaaacccttttgcttctctgacg
acctcgtcatcagtggaaatccagtcaccccgggtggaaaatggagaccccctcgccaac
ccctgggttccccctgcttccacagacaccgccacacccaccactacccccaccctgtcc
agcaatggccctcagaccaccctgcacaacctaggtcccgccatgggaggtagaacatct
aacagtgcagctatggccaatagtccgggaatgcagagtcttctgcagcagatcacggag
aaccccacactgatgcataacatgctgtcagccccctacatgaggagcctactcaacagc
ctgagccagaaccctgacctagcagcacagatgatgctgaacaacccactgttttctggg
aaccctcaactgcagcagcaaatgagacaacaactccctatgttcctccaacagatgcag
aaccctgagatgctgtcggccatgtccaaccccagggccatgcaggcactgctgcagatc
caacagggactgcagacccttgccactgaggcacctggattcataccaggggttggactg
ggaggcgccggctcagatcttaaccctgcccctggattgtcatcagaccccgcccctagt
gacctgagcagtgggtcccaggtagtcccggaaacgggtcagcggcaacaacaacaacag
tttgtgcgtcagatgctagacgctctcgctagcaccaatcagcaggctcagactgaagag
ctgctgttccaggagcaggtggagcagctgacgaccatgggcttcctcaacccagaggcc
aacctgcaggccctcatcgctaccgggggagacgtcaacgccgctgtagaacgactgctg
gactcgccacccttgtaa
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