Oncorhynchus mykiss (rainbow trout): 110525284
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Entry
110525284 CDS
T07259
Symbol
smn1
Name
(RefSeq) survival motor neuron protein 1 isoform X2
KO
K13129
survival motor neuron protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110525284 (smn1)
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
110525284 (smn1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMN_YG-box
SMN_Tudor
SMN_G2-BD
TUDOR
Mn_catalase
Motif
Other DBs
NCBI-GeneID:
110525284
NCBI-ProteinID:
XP_021460965
Ensembl:
ENSOMYG00000034068
UniProt:
A0A8C7T4N6
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All DBs
Position
6:complement(12712292..12715896)
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AA seq
281 aa
AA seq
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MAHGCKDVLFARGAAQSDDSDIWDDTALIKAYDKAVASFKTALKGEEDTQSSERDKPGKK
RKNNRNNRSRKRSNAPLDKEWQVGDSCCAYWSKDGNLYAATISSIDEQRGTCIVVFTHYG
NEEEQNLRDLLIESSEVDEEAPSKVKEAESSTEESDRSSAPHPHSHVPRSKPKFKSPKGP
PMSGPGFPGFPLGPPPMPGFRMGDSRRPGASRPAPPGWPPMMPCGPPMIPPPPPMSPNGE
DDAALGGMLLAWYMSGYHTGYYLGLKQGRKEAVSGRKTRHK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggcacatgggtgtaaagatgtgctttttgctcgtggagctgcacaaagtgacgattca
gacatttgggatgacactgcactgataaaggcctacgacaaagctgttgcatcatttaag
actgccctgaaaggtgaggaggacacgcaaagttcagagagagacaagcctggaaagaaa
cgaaaaaacaacagaaacaaccgcagcagaaagagaagcaatgctcctctggataaagag
tggcaagtcggagactcctgctgtgcctactggtctaaagatggcaatttgtacgctgcc
acgatctcatccatagatgagcagaggggcacctgtatagttgtgttcacacactatggg
aacgaggaggagcagaacctccgagaccttctgatagagagctcagaggtagatgaggaa
gcccctagtaaggttaaagaagcagagtcttctacagaggagagcgacaggtcgtccgcc
ccacaccctcacagtcatgtgccacgctctaaacccaaattcaaatcccccaaaggacct
cctatgtcgggtccaggcttccctggctttcccctaggtccccctccaatgcctggcttc
agaatgggagactcaaggcgacctggggcctccaggcccgcccctccaggatggcctcct
atgatgccctgtgggccaccgatgatccctcctcctccccccatgagtccaaacggagag
gatgatgcggctctgggaggtatgctgctcgcctggtacatgagtggttaccacactgga
tactacctgggtttgaaacaaggccgcaaagaagctgtgtctggaaggaagactcgccac
aagtga
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